RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 RNASEKQ6P5S7 137 aaKnown RBP10.99□□□□□ -0.65
CDC42BPB-203ENST00000558867 C12orf57Q99622 126 aa10.99□□□□□ -0.65
CDC42BPB-203ENST00000558867 TRGV2A0A075B6R0 118 aa10.98□□□□□ -0.65
CDC42BPB-203ENST00000558867 TRAV9-2A0A087WT02 112 aa10.98□□□□□ -0.65
CDC42BPB-203ENST00000558867 FAM229AH3BQW9 127 aa10.98□□□□□ -0.65
CDC42BPB-203ENST00000558867 TNFRSF6BO95407 300 aa10.98□□□□□ -0.65
CDC42BPB-203ENST00000558867 NRACQ8N912 160 aa10.98□□□□□ -0.65
CDC42BPB-203ENST00000558867 MAP1LC3AQ9H492 121 aa10.98□□□□□ -0.65
CDC42BPB-203ENST00000558867 NXT2Q9NPJ8 142 aaKnown RBP10.98□□□□□ -0.65
CDC42BPB-203ENST00000558867 AP5S1Q9NUS5 200 aa10.98□□□□□ -0.65
CDC42BPB-203ENST00000558867 XGP55808 180 aa10.97□□□□□ -0.65
CDC42BPB-203ENST00000558867 RPL32P62910 135 aaKnown RBP10.97□□□□□ -0.65
CDC42BPB-203ENST00000558867 DAZ2Q13117 558 aaKnown RBP10.97□□□□□ -0.65
CDC42BPB-203ENST00000558867 Q6ZRN7 208 aaPredicted RBP10.97□□□□□ -0.65
CDC42BPB-203ENST00000558867 FA2HQ7L5A8 372 aa10.97□□□□□ -0.65
CDC42BPB-203ENST00000558867 C11orf72Q8NBR9 251 aa10.97□□□□□ -0.65
CDC42BPB-203ENST00000558867 PRSS3P2Q8NHM4 247 aa10.97□□□□□ -0.65
CDC42BPB-203ENST00000558867 C20orf78Q9BR46 151 aa10.97□□□□□ -0.65
CDC42BPB-203ENST00000558867 A0A096LPF7 62 aa10.96□□□□□ -0.65
CDC42BPB-203ENST00000558867 SMKR1H3BMG3 65 aa10.96□□□□□ -0.65
CDC42BPB-203ENST00000558867 M0R2P5 195 aa10.96□□□□□ -0.65
CDC42BPB-203ENST00000558867 NCR2O95944 276 aa10.96□□□□□ -0.65
CDC42BPB-203ENST00000558867 SMIM17P0DL12 118 aa10.96□□□□□ -0.65
CDC42BPB-203ENST00000558867 C14orf178Q8N769 122 aaPredicted RBP10.96□□□□□ -0.65
CDC42BPB-203ENST00000558867 SRRM2Q9UQ35 2752 aaKnown RBP10.96□□□□□ -0.66
CDC42BPB-203ENST00000558867 IGHV1-24A0A0C4DH33 117 aa10.95□□□□□ -0.66
CDC42BPB-203ENST00000558867 K7EMI3 77 aa10.95□□□□□ -0.66
CDC42BPB-203ENST00000558867 ICOSQ9Y6W8 199 aa10.95□□□□□ -0.66
CDC42BPB-203ENST00000558867 A8MWV9 139 aa10.94□□□□□ -0.66
CDC42BPB-203ENST00000558867 CRYGDP07320 174 aa10.94□□□□□ -0.66
CDC42BPB-203ENST00000558867 IFI27P40305 119 aaPredicted RBP10.94□□□□□ -0.66
CDC42BPB-203ENST00000558867 ZNF876PQ49A33 203 aa10.94□□□□□ -0.66
CDC42BPB-203ENST00000558867 FAM19A2Q8N3H0 131 aa10.94□□□□□ -0.66
CDC42BPB-203ENST00000558867 Q8N8P6 123 aa10.94□□□□□ -0.66
CDC42BPB-203ENST00000558867 C18orf15Q96N68 181 aa10.94□□□□□ -0.66
CDC42BPB-203ENST00000558867 K7EP13 123 aa10.93□□□□□ -0.66
CDC42BPB-203ENST00000558867 Q6ZTI0 123 aa10.93□□□□□ -0.66
CDC42BPB-203ENST00000558867 RASL10AQ92737 203 aa10.93□□□□□ -0.66
CDC42BPB-203ENST00000558867 VSIG2Q96IQ7 327 aa10.93□□□□□ -0.66
CDC42BPB-203ENST00000558867 FAT1Q14517 4588 aa10.92□□□□□ -0.66
CDC42BPB-203ENST00000558867 A0A087WTM6 91 aa10.92□□□□□ -0.66
CDC42BPB-203ENST00000558867 TRBV6-5A0A0K0K1A5 114 aa10.92□□□□□ -0.66
CDC42BPB-203ENST00000558867 J3QL48 77 aa10.92□□□□□ -0.66
CDC42BPB-203ENST00000558867 PAX4O43316 350 aa10.92□□□□□ -0.66
CDC42BPB-203ENST00000558867 GAS8-AS1O95177 125 aa10.92□□□□□ -0.66
CDC42BPB-203ENST00000558867 GCSHP23434 173 aa10.92□□□□□ -0.66
CDC42BPB-203ENST00000558867 VPS13BQ7Z7G8 4022 aa10.91□□□□□ -0.66
CDC42BPB-203ENST00000558867 TRGV1A0A0A0MS02 117 aa10.91□□□□□ -0.66
CDC42BPB-203ENST00000558867 RHODO00212 210 aa10.91□□□□□ -0.66
CDC42BPB-203ENST00000558867 MGPP08493 103 aa10.91□□□□□ -0.66
CDC42BPB-203ENST00000558867 GATA1P15976 413 aaPredicted RBP10.91□□□□□ -0.66
CDC42BPB-203ENST00000558867 SUMO2P61956 95 aaKnown RBP10.91□□□□□ -0.66
CDC42BPB-203ENST00000558867 UFSP1Q6NVU6 142 aa10.91□□□□□ -0.66
CDC42BPB-203ENST00000558867 SMIM2Q9BVW6 85 aa10.91□□□□□ -0.66
CDC42BPB-203ENST00000558867 HSPB8Q9UJY1 196 aa10.91□□□□□ -0.66
CDC42BPB-203ENST00000558867 A0A096LNJ9 63 aa10.9□□□□□ -0.66
CDC42BPB-203ENST00000558867 TRAV26-2A0A0B4J265 109 aa10.9□□□□□ -0.66
CDC42BPB-203ENST00000558867 LOC389332A0A1B0GUA5 103 aa10.9□□□□□ -0.66
CDC42BPB-203ENST00000558867 LEPROTL1O95214 131 aa10.9□□□□□ -0.66
CDC42BPB-203ENST00000558867 SMR3BP02814 79 aaPredicted RBP10.9□□□□□ -0.66
CDC42BPB-203ENST00000558867 C3orf79P0CE67 100 aa10.9□□□□□ -0.66
CDC42BPB-203ENST00000558867 FUSP35637 526 aaKnown RBP eCLIP10.9□□□□□ -0.66
CDC42BPB-203ENST00000558867 MRPL23Q16540 153 aaKnown RBP10.9□□□□□ -0.66
CDC42BPB-203ENST00000558867 SUMO4Q6EEV6 95 aa10.9□□□□□ -0.66
CDC42BPB-203ENST00000558867 Q6ZSN1 163 aa10.9□□□□□ -0.66
CDC42BPB-203ENST00000558867 JPT2Q9H910 190 aa10.9□□□□□ -0.66
CDC42BPB-203ENST00000558867 NIT2Q9NQR4 276 aa10.9□□□□□ -0.66
CDC42BPB-203ENST00000558867 MYCBP2O75592 4640 aa10.9□□□□□ -0.66
CDC42BPB-203ENST00000558867 HBDP02042 147 aa10.89□□□□□ -0.67
CDC42BPB-203ENST00000558867 KRTAP10-1P60331 282 aa10.89□□□□□ -0.67
CDC42BPB-203ENST00000558867 ZFP2Q6ZN57 461 aa10.89□□□□□ -0.67
CDC42BPB-203ENST00000558867 PRO0255Q9UI72 69 aa10.89□□□□□ -0.67
CDC42BPB-203ENST00000558867 FLG2Q5D862 2391 aaPredicted RBP10.89□□□□□ -0.67
CDC42BPB-203ENST00000558867 A0A087WWL8 130 aa10.88□□□□□ -0.67
CDC42BPB-203ENST00000558867 H7C1H1 209 aa10.88□□□□□ -0.67
CDC42BPB-203ENST00000558867 M0QY20 66 aa10.88□□□□□ -0.67
CDC42BPB-203ENST00000558867 RS1O15537 224 aa10.88□□□□□ -0.67
CDC42BPB-203ENST00000558867 FCER1GP30273 86 aa10.88□□□□□ -0.67
CDC42BPB-203ENST00000558867 Q8N976 141 aa10.88□□□□□ -0.67
CDC42BPB-203ENST00000558867 LINC01549A6NIU2 74 aa10.87□□□□□ -0.67
CDC42BPB-203ENST00000558867 CIDEAO60543 219 aa10.87□□□□□ -0.67
CDC42BPB-203ENST00000558867 DNAH10OSP0CZ25 163 aa10.87□□□□□ -0.67
CDC42BPB-203ENST00000558867 POLR2KP53803 58 aaKnown RBP10.87□□□□□ -0.67
CDC42BPB-203ENST00000558867 LYPD5Q6UWN5 251 aa10.87□□□□□ -0.67
CDC42BPB-203ENST00000558867 TEX43Q6ZNM6 134 aa10.87□□□□□ -0.67
CDC42BPB-203ENST00000558867 NEGR1Q7Z3B1 354 aa10.87□□□□□ -0.67
CDC42BPB-203ENST00000558867 TMEM70Q9BUB7 260 aa10.87□□□□□ -0.67
CDC42BPB-203ENST00000558867 TNFRSF18Q9Y5U5 241 aa10.87□□□□□ -0.67
CDC42BPB-203ENST00000558867 SCGB1D1O95968 90 aa10.86□□□□□ -0.67
CDC42BPB-203ENST00000558867 KRTDAPP60985 99 aa10.86□□□□□ -0.67
CDC42BPB-203ENST00000558867 S100A12P80511 92 aa10.86□□□□□ -0.67
CDC42BPB-203ENST00000558867 LAGE3Q14657 143 aa10.86□□□□□ -0.67
CDC42BPB-203ENST00000558867 ZNF56Q15929 161 aa10.86□□□□□ -0.67
CDC42BPB-203ENST00000558867 PMCHL1Q16048 86 aa10.86□□□□□ -0.67
CDC42BPB-203ENST00000558867 ORMDL2Q53FV1 153 aa10.86□□□□□ -0.67
CDC42BPB-203ENST00000558867 CFAP126Q5VTH2 177 aa10.86□□□□□ -0.67
CDC42BPB-203ENST00000558867 PET117Q6UWS5 81 aa10.86□□□□□ -0.67
CDC42BPB-203ENST00000558867 RPL39LQ96EH5 51 aaKnown RBP10.86□□□□□ -0.67
CDC42BPB-203ENST00000558867 ST20Q9HBF5 79 aa10.86□□□□□ -0.67
CDC42BPB-203ENST00000558867 HHLA3Q9XRX5 114 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms