RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 SULT1A1P50225 295 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 RAB4BP61018 213 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 HBG1P69891 147 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 HBG2P69892 147 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 BAXQ07812 192 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 IQCJQ1A5X6 159 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 KIAA1644Q3SXP7 199 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 SMUG1Q53HV7 270 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 FAM74A4Q5TZK3 123 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 MCFD2Q8NI22 146 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 DEDD2Q8WXF8 326 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 NDFIP1Q9BT67 221 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 DERL1Q9BUN8 251 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 FUNDC2Q9BWH2 189 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 NPCDR1Q9BY65 106 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 MBD2Q9UBB5 411 aa2.75□□□□□ -1.97
SCFD1-223ENST00000557076 RSL24D1Q9UHA3 163 aaKnown RBP2.75□□□□□ -1.97
SCFD1-223ENST00000557076 IGLV4-60A0A075B6I1 120 aa2.74□□□□□ -1.97
SCFD1-223ENST00000557076 UBE2L5PA0A1B0GUS4 154 aa2.74□□□□□ -1.97
SCFD1-223ENST00000557076 FABP5P3A8MUU1 101 aa2.74□□□□□ -1.97
SCFD1-223ENST00000557076 RGS5O15539 181 aa2.74□□□□□ -1.97
SCFD1-223ENST00000557076 ARMS2P0C7Q2 107 aa2.74□□□□□ -1.97
SCFD1-223ENST00000557076 BCAP31P51572 246 aa2.74□□□□□ -1.97
SCFD1-223ENST00000557076 AP3S2P59780 193 aa2.74□□□□□ -1.97
SCFD1-223ENST00000557076 IL18Q14116 193 aa2.74□□□□□ -1.97
SCFD1-223ENST00000557076 HIGD2BQ4VC39 106 aa2.74□□□□□ -1.97
SCFD1-223ENST00000557076 SAPCD1Q5SSQ6 148 aa2.74□□□□□ -1.97
SCFD1-223ENST00000557076 FAM162BQ5T6X4 162 aa2.74□□□□□ -1.97
SCFD1-223ENST00000557076 TMEM252Q8N6L7 170 aa2.74□□□□□ -1.97
SCFD1-223ENST00000557076 AQP10Q96PS8 301 aa2.74□□□□□ -1.97
SCFD1-223ENST00000557076 Q9H521 79 aa2.74□□□□□ -1.97
SCFD1-223ENST00000557076 C11orf1Q9H5F2 150 aa2.74□□□□□ -1.97
SCFD1-223ENST00000557076 RPP21Q9H633 154 aaKnown RBP2.74□□□□□ -1.97
SCFD1-223ENST00000557076 IGLV7-46A0A075B6I9 117 aa2.73□□□□□ -1.97
SCFD1-223ENST00000557076 IGHV1-24A0A0C4DH33 117 aa2.73□□□□□ -1.97
SCFD1-223ENST00000557076 XKRY2A2RUG3 117 aa2.73□□□□□ -1.97
SCFD1-223ENST00000557076 H3BMQ9 156 aa2.73□□□□□ -1.97
SCFD1-223ENST00000557076 K7EQM0 130 aa2.73□□□□□ -1.97
SCFD1-223ENST00000557076 EIF3GO75821 320 aaKnown RBP eCLIP2.73□□□□□ -1.97
SCFD1-223ENST00000557076 TAS2R45P59539 299 aa2.73□□□□□ -1.97
SCFD1-223ENST00000557076 EIF5AP63241 154 aaKnown RBP2.73□□□□□ -1.97
SCFD1-223ENST00000557076 UBE2L3P68036 154 aaKnown RBP2.73□□□□□ -1.97
SCFD1-223ENST00000557076 ASB16-AS1Q495Z4 193 aa2.73□□□□□ -1.97
SCFD1-223ENST00000557076 ZFP69Q49AA0 526 aa2.73□□□□□ -1.97
SCFD1-223ENST00000557076 LRRC37A5PQ49AS3 106 aa2.73□□□□□ -1.97
SCFD1-223ENST00000557076 KHDC3LQ587J8 217 aa2.73□□□□□ -1.97
SCFD1-223ENST00000557076 C9orf116Q5BN46 136 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-223ENST00000557076 COX8CQ7Z4L0 72 aa2.73□□□□□ -1.97
SCFD1-223ENST00000557076 OR5C1Q8NGR4 320 aa2.73□□□□□ -1.97
SCFD1-223ENST00000557076 VCX3AQ9NNX9 186 aa2.73□□□□□ -1.97
SCFD1-223ENST00000557076 PSG8Q9UQ74 426 aa2.73□□□□□ -1.97
SCFD1-223ENST00000557076 PHLDA3Q9Y5J5 127 aa2.73□□□□□ -1.97
SCFD1-223ENST00000557076 A0A087WXM4 84 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 A0A087WZ39 114 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 LOC107984640A0A0U1RRK4 108 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 B4DEV8 164 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 KRBOX1C9JBD0 128 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 H3BVH4 76 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 TCRAP04437 139 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 FGF6P10767 208 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 PVALBP20472 110 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-223ENST00000557076 SULT1A2P50226 295 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 CYCSP99999 105 aaKnown RBP2.72□□□□□ -1.97
SCFD1-223ENST00000557076 FLI1Q01543 452 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-223ENST00000557076 SYCNQ0VAF6 134 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 LCE3AQ5TA76 89 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 PHF5AQ7RTV0 110 aaKnown RBP2.72□□□□□ -1.97
SCFD1-223ENST00000557076 STX12Q86Y82 276 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 ZFP82Q8N141 532 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 TOMM5Q8N4H5 51 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 TSKUQ8WUA8 353 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 C2orf48Q96LS8 159 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 CARD19Q96LW7 228 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 FAM218AQ96MZ4 157 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 MRPS26Q9BYN8 205 aaKnown RBP2.72□□□□□ -1.97
SCFD1-223ENST00000557076 KRTAP4-1Q9BYQ7 146 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 MED28Q9H204 178 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 KCNIP2Q9NS61 270 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 NDUFA13Q9P0J0 144 aa2.72□□□□□ -1.97
SCFD1-223ENST00000557076 IGHV1-58A0A0C4DH39 117 aa2.71□□□□□ -1.98
SCFD1-223ENST00000557076 IGSF23A1L1A6 192 aa2.71□□□□□ -1.98
SCFD1-223ENST00000557076 KRTAP16-1A8MUX0 517 aa2.71□□□□□ -1.98
SCFD1-223ENST00000557076 HSBP1L1C9JCN9 74 aa2.71□□□□□ -1.98
SCFD1-223ENST00000557076 M0R381 172 aa2.71□□□□□ -1.98
SCFD1-223ENST00000557076 TPT1P13693 172 aaKnown RBP2.71□□□□□ -1.98
SCFD1-223ENST00000557076 CRIP1P50238 77 aa2.71□□□□□ -1.98
SCFD1-223ENST00000557076 DSCR10P59022 87 aa2.71□□□□□ -1.98
SCFD1-223ENST00000557076 GNG5P63218 68 aa2.71□□□□□ -1.98
SCFD1-223ENST00000557076 IL15RAQ13261 267 aa2.71□□□□□ -1.98
SCFD1-223ENST00000557076 KRTAP13-3Q3SY46 172 aa2.71□□□□□ -1.98
SCFD1-223ENST00000557076 NOTCH2NLQ7Z3S9 236 aa2.71□□□□□ -1.98
SCFD1-223ENST00000557076 PRNTQ86SH4 94 aa2.71□□□□□ -1.98
SCFD1-223ENST00000557076 C5orf17Q8NAS9 161 aa2.71□□□□□ -1.98
SCFD1-223ENST00000557076 CHCHD10Q8WYQ3 142 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-223ENST00000557076 TMEM243Q9BU79 118 aa2.71□□□□□ -1.98
SCFD1-223ENST00000557076 EPDR1Q9UM22 224 aa2.71□□□□□ -1.98
SCFD1-223ENST00000557076 LSM5Q9Y4Y9 91 aaKnown RBP2.71□□□□□ -1.98
SCFD1-223ENST00000557076 C17orf112F2Z3M2 114 aa2.7□□□□□ -1.98
SCFD1-223ENST00000557076 NDUFB6O95139 128 aa2.7□□□□□ -1.98
SCFD1-223ENST00000557076 RPL12P30050 165 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms