RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 EDN2P20800 178 aa2.87□□□□□ -1.95
ATXN3-240ENST00000556339 EVI2AP22794 236 aa2.87□□□□□ -1.95
ATXN3-240ENST00000556339 CKS2P33552 79 aa2.87□□□□□ -1.95
ATXN3-240ENST00000556339 IFI27P40305 119 aaPredicted RBP2.87□□□□□ -1.95
ATXN3-240ENST00000556339 RBX1P62877 108 aa2.87□□□□□ -1.95
ATXN3-240ENST00000556339 MRPL51Q4U2R6 128 aaKnown RBP2.87□□□□□ -1.95
ATXN3-240ENST00000556339 SAMD13Q5VXD3 122 aa2.87□□□□□ -1.95
ATXN3-240ENST00000556339 ERASQ7Z444 233 aa2.87□□□□□ -1.95
ATXN3-240ENST00000556339 AMN1Q8IY45 258 aa2.87□□□□□ -1.95
ATXN3-240ENST00000556339 ATOH7Q8N100 152 aa2.87□□□□□ -1.95
ATXN3-240ENST00000556339 Q8N8P6 123 aa2.87□□□□□ -1.95
ATXN3-240ENST00000556339 OVOL2Q9BRP0 275 aa2.87□□□□□ -1.95
ATXN3-240ENST00000556339 A0A096LNJ9 63 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 IGHV3-49A0A0A0MS15 119 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 TRAV12-1A0A0B4J245 112 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 MUC21A0A0G2JKD1 596 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 MUC21A0A140T8X8 626 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 TMEM213A2RRL7 107 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 NUPR2A6NF83 97 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 D6R8Y8 96 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 NDUFA4O00483 81 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 SNAI2O43623 268 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 CTSGP08311 255 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 PLNP26678 52 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 LINC01547P58512 204 aaPredicted RBP2.86□□□□□ -1.95
ATXN3-240ENST00000556339 RPL32P62910 135 aaKnown RBP2.86□□□□□ -1.95
ATXN3-240ENST00000556339 COTL1Q14019 142 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 DEFB135Q30KP9 77 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 MAJINQ3KP22 176 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 OCIAD2Q56VL3 154 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 MUC21Q5SSG8 566 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 CEMP1Q6PRD7 247 aaPredicted RBP2.86□□□□□ -1.95
ATXN3-240ENST00000556339 UNQ9165/PRO28630Q6UXU0 137 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 C2orf91Q6ZV80 131 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 APRG1Q8IVJ8 170 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 ZNF502Q8TBZ5 544 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 MRAP2Q96G30 205 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 SGK494Q96LW2 274 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 LINC00477Q96M19 166 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 SPAG8Q99932 426 aaPredicted RBP2.86□□□□□ -1.95
ATXN3-240ENST00000556339 C20orf78Q9BR46 151 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 CSTL1Q9H114 145 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 CST9LQ9H4G1 147 aa2.86□□□□□ -1.95
ATXN3-240ENST00000556339 DAZ1Q9NQZ3 744 aaKnown RBP2.86□□□□□ -1.95
ATXN3-240ENST00000556339 IGHV3OR16-13A0A075B7E8 117 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 IGHV3-74A0A0B4J1X5 117 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 J3QR89 54 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 K7EMT4 169 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 K7EP34 96 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 M0R381 172 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 M0R3E3 92 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 DPM2O94777 84 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 IGKCP01834 107 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 ORM1P02763 201 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 SMIM13P0DJ93 91 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 FABP2P12104 132 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 ZNF138P52744 262 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 LAGE3Q14657 143 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 ORMDL2Q53FV1 153 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 PAPPA-AS1Q5QFB9 102 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 TMEM78Q5T7P6 136 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 AMMECR1LQ6DCA0 310 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 UFSP1Q6NVU6 142 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 LINC00173Q6ZV60 143 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 STHQ8IWL8 128 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 OR8A1Q8NGG7 326 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 OR11H2Q8NH07 326 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 KIR2DL5BQ8NHK3 375 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 C11orf45Q8TAV5 145 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 RNASE8Q8TDE3 154 aaKnown RBP2.85□□□□□ -1.95
ATXN3-240ENST00000556339 PHLDA1Q8WV24 401 aaPredicted RBP2.85□□□□□ -1.95
ATXN3-240ENST00000556339 RNF185Q96GF1 192 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 C17orf77Q96MU5 243 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 METTL26Q96S19 204 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 RHPN1-AS1Q9BWJ2 59 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 TP53TG1Q9Y2A0 90 aa2.85□□□□□ -1.95
ATXN3-240ENST00000556339 IGLV2-18A0A075B6J9 118 aa2.84□□□□□ -1.95
ATXN3-240ENST00000556339 TRAV21A0A0B4J279 112 aa2.84□□□□□ -1.95
ATXN3-240ENST00000556339 IGHV3-66A0A0C4DH42 116 aa2.84□□□□□ -1.95
ATXN3-240ENST00000556339 IGHV7-4-1A0A0J9YVY3 117 aa2.84□□□□□ -1.95
ATXN3-240ENST00000556339 A0A1W2PPM0 123 aa2.84□□□□□ -1.95
ATXN3-240ENST00000556339 CBY3A6NI87 242 aa2.84□□□□□ -1.95
ATXN3-240ENST00000556339 F8W1H4 67 aa2.84□□□□□ -1.95
ATXN3-240ENST00000556339 H3BTX0 84 aa2.84□□□□□ -1.95
ATXN3-240ENST00000556339 DEFB4AO15263 64 aa2.84□□□□□ -1.95
ATXN3-240ENST00000556339 NPYP01303 97 aa2.84□□□□□ -1.95
ATXN3-240ENST00000556339 SCGB1A1P11684 91 aa2.84□□□□□ -1.95
ATXN3-240ENST00000556339 LEPP41159 167 aa2.84□□□□□ -1.95
ATXN3-240ENST00000556339 DEFB131AP59861 70 aa2.84□□□□□ -1.95
ATXN3-240ENST00000556339 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.84□□□□□ -1.95
ATXN3-240ENST00000556339 NEGR1Q7Z3B1 354 aa2.84□□□□□ -1.95
ATXN3-240ENST00000556339 TPPP3Q9BW30 176 aa2.84□□□□□ -1.95
ATXN3-240ENST00000556339 HHLA3Q9XRX5 114 aa2.84□□□□□ -1.95
ATXN3-240ENST00000556339 MUC4Q99102 2169 aa2.84□□□□□ -1.96
ATXN3-240ENST00000556339 IGKV2-40A0A087WW87 121 aaPredicted RBP2.83□□□□□ -1.96
ATXN3-240ENST00000556339 A0A087WX48 190 aa2.83□□□□□ -1.96
ATXN3-240ENST00000556339 TRAV8-6A0A0B4J262 113 aa2.83□□□□□ -1.96
ATXN3-240ENST00000556339 LOC389332A0A1B0GUA5 103 aa2.83□□□□□ -1.96
ATXN3-240ENST00000556339 A0A1B0GWB2 263 aa2.83□□□□□ -1.96
ATXN3-240ENST00000556339 IGLL5B9A064 214 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms