RNA–Protein interactions for RNA: ENST00000555961.1

NEK9-208, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-208ENST00000555961 C22orf24Q9Y442 160 aa0.45□□□□□ -2.34
NEK9-208ENST00000555961 MUC16Q8WXI7 14507 aa0.45□□□□□ -2.34
NEK9-208ENST00000555961 NBDYA0A0U1RRE5 68 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 RIIAD1A6NNX1 92 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 M0R2T5 61 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 DEFB4AO15263 64 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 HMGB3O15347 200 aaKnown RBP0.44□□□□□ -2.34
NEK9-208ENST00000555961 LYRM1O43325 122 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 ERC2-IT1O76042 136 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 GADD45GO95257 159 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 PIRTP0C851 137 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 COX7CP15954 63 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 SPRR2EP22531 72 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 SRIP30626 198 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 SPRR2BP35325 72 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 SPRR2AP35326 72 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 DYNLT3P51808 116 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 ROMO1P60602 79 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 NCALDP61601 193 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 CTAG1AP78358 180 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 RPL19P84098 196 aaKnown RBP0.44□□□□□ -2.34
NEK9-208ENST00000555961 SPCS2Q15005 226 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 DEFB135Q30KP9 77 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 SPRNQ5BIV9 151 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 HAGHLQ6PII5 290 aaPredicted RBP0.44□□□□□ -2.34
NEK9-208ENST00000555961 LINC00575Q6W349 94 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 ZNF720Q7Z2F6 126 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 VMO1Q7Z5L0 202 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 OR5AS1Q8N127 324 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 OR5D16Q8NGK9 328 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 OR5D14Q8NGL3 314 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 OR10AC1Q8NH08 325 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 OR13C6PQ8NH95 151 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 LINC00052Q96N35 136 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 PBDC1Q9BVG4 233 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 OR2J1Q9GZK6 312 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 MAP1LC3BQ9GZQ8 125 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 POPDC3Q9HBV1 291 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 CDC42SE1Q9NRR8 79 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 PRNDQ9UKY0 176 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 TNFSF18Q9UNG2 199 aa0.44□□□□□ -2.34
NEK9-208ENST00000555961 TANC2Q9HCD6 1990 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 SYNE1Q8NF91 8797 aaKnown RBP0.43□□□□□ -2.34
NEK9-208ENST00000555961 TRAV10A0A0B4J240 114 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 M0R378 163 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 GPR31O00270 319 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 NPFFO15130 113 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 CCL25O15444 150 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 IFNA21P01568 189 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 IFNA17P01571 189 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 OGNP20774 298 aaKnown RBP0.43□□□□□ -2.34
NEK9-208ENST00000555961 SPRR2DP22532 72 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 NFYBP25208 207 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 INSL3P51460 131 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 DEFA1P59665 94 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 RPL37AP61513 92 aaKnown RBP0.43□□□□□ -2.34
NEK9-208ENST00000555961 CDK6Q00534 326 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 CCSMST1Q4G0I0 132 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 KRTAP26-1Q6PEX3 210 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 CLECL1Q8IZS7 167 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 C10orf82Q8WW14 230 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 OBSCN-AS1Q96MR7 158 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 NPCDR1Q9BY65 106 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 DPH3P1Q9H4G8 78 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 CACYBPQ9HB71 228 aaKnown RBP0.43□□□□□ -2.34
NEK9-208ENST00000555961 LINC00846Q9NV44 126 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 RNF11Q9Y3C5 154 aa0.43□□□□□ -2.34
NEK9-208ENST00000555961 TRAV3A0A0B4J244 114 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 E5RI56 91 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 F8W1H4 67 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 H3BRM9 83 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 TMEM256-PLSCR3K7ERE1 68 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 NCR3O14931 201 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 HIST1H2BKO60814 126 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 HIST1H2BJP06899 126 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 CMPK1P30085 196 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 BASP1P80723 227 aaKnown RBP0.42□□□□□ -2.34
NEK9-208ENST00000555961 HACD4Q5VWC8 232 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 LINC00299Q6ZSB3 139 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 PHF5AQ7RTV0 110 aaKnown RBP0.42□□□□□ -2.34
NEK9-208ENST00000555961 ARPINQ7Z6K5 226 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 CROCCP2Q86T23 111 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 Q8IYB0 196 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.42□□□□□ -2.34
NEK9-208ENST00000555961 MORN4Q8NDC4 146 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 AP3S1Q92572 193 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 PLEKHB2Q96CS7 222 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 ZHX1-C8orf76Q96EF9 292 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 HYLS1Q96M11 299 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 LINC01600Q96MT4 127 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 PRRT1Q99946 306 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 GINS3Q9BRX5 216 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 BIN3Q9NQY0 253 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 MED11Q9P086 117 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 PCTPQ9UKL6 214 aa0.42□□□□□ -2.34
NEK9-208ENST00000555961 A0A087WTM6 91 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 DEFB131BA0A096LNP1 70 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 OR2T8A6NH00 312 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 H3BQV1 296 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 CCL22O00626 93 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms