RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 MARCH3Q86UD3 253 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 OR1J4Q8NGS1 313 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 OR10AG1Q8NH19 301 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 LINC01560Q8TB33 94 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 STAG3L4Q8TBR4 150 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 PATE1Q8WXA2 126 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 B9D2Q9BPU9 175 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 PMCHL2Q9BQD1 86 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 SLC35B3Q9H1N7 401 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 ZNF286AQ9HBT8 521 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 BCL2L10Q9HD36 194 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 ZNF492Q9P255 531 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 CRCT1Q9UGL9 99 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 LSM2Q9Y333 95 aaKnown RBP2.02□□□□□ -2.09
SRP54-209ENST00000555746 DNAH7Q8WXX0 4024 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 MED12LQ86YW9 2145 aa2.02□□□□□ -2.09
SRP54-209ENST00000555746 IGHV1-45A0A0A0MS14 117 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 IGHV3-66A0A0C4DH42 116 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 A0A1W2PPM0 123 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 C9JCJ5 164 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 BUB1B-PAK6H3BSN5 160 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 GNGT2O14610 69 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 PROSCO94903 275 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 WISP3O95389 354 aaPredicted RBP2.01□□□□□ -2.09
SRP54-209ENST00000555746 SOD1P00441 154 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 HBDP02042 147 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 CD7P09564 240 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 COX6A1P12074 109 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 NFYAP23511 347 aaPredicted RBP2.01□□□□□ -2.09
SRP54-209ENST00000555746 HLA-DMBP28068 263 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 UBE2AP49459 152 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 ATP5EP56381 51 aaPredicted RBP2.01□□□□□ -2.09
SRP54-209ENST00000555746 FOXF1Q12946 379 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 PMCHL1Q16048 86 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 DEFB116Q30KQ4 102 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 KIAA2026Q5HYC2 2103 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 ZNF678Q5SXM1 525 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 BVES-AS1Q5T3Y7 98 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 LGALS9CQ6DKI2 356 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 C7orf65Q6ZTY9 151 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 GPHB5Q86YW7 130 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 RPRMLQ8N4K4 120 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 C15orf56Q8N910 161 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 C15orf53Q8NAA6 179 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 ZNF555Q8NEP9 628 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 OR10G2Q8NGC3 310 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 LSM10Q969L4 123 aaKnown RBP2.01□□□□□ -2.09
SRP54-209ENST00000555746 RMI2Q96E14 147 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 ZNF714Q96N38 554 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 SMDT1Q9H4I9 107 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 RPP21Q9H633 154 aaKnown RBP2.01□□□□□ -2.09
SRP54-209ENST00000555746 NDUFB11Q9NX14 153 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 IL36BQ9NZH7 164 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 TAC3Q9UHF0 121 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 ZNF222Q9UK12 451 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 EPDR1Q9UM22 224 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 DNAJC15Q9Y5T4 150 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 FSIP2Q5CZC0 6907 aa2.01□□□□□ -2.09
SRP54-209ENST00000555746 IGKV2D-24A0A075B6R9 120 aa2□□□□□ -2.09
SRP54-209ENST00000555746 TRAV16A0A0A6YYK6 109 aaPredicted RBP2□□□□□ -2.09
SRP54-209ENST00000555746 TRBV7-7A0A0K0K1E9 115 aa2□□□□□ -2.09
SRP54-209ENST00000555746 RBAKDNA6NC62 111 aa2□□□□□ -2.09
SRP54-209ENST00000555746 A8MWL6 223 aa2□□□□□ -2.09
SRP54-209ENST00000555746 K7ERJ3 54 aa2□□□□□ -2.09
SRP54-209ENST00000555746 ZNF324O75467 553 aaPredicted RBP2□□□□□ -2.09
SRP54-209ENST00000555746 IGLV2-8P01709 118 aa2□□□□□ -2.09
SRP54-209ENST00000555746 SFTA3P0C7M3 94 aa2□□□□□ -2.09
SRP54-209ENST00000555746 ZNF688P0C7X2 276 aa2□□□□□ -2.09
SRP54-209ENST00000555746 RPL30P62888 115 aaKnown RBP2□□□□□ -2.09
SRP54-209ENST00000555746 LINC01554Q52M75 96 aa2□□□□□ -2.09
SRP54-209ENST00000555746 LAIR2Q6ISS4 152 aa2□□□□□ -2.09
SRP54-209ENST00000555746 ZNF645Q8N7E2 425 aa2□□□□□ -2.09
SRP54-209ENST00000555746 PPDPFLQ8WWR9 84 aa2□□□□□ -2.09
SRP54-209ENST00000555746 C20orf78Q9BR46 151 aa2□□□□□ -2.09
SRP54-209ENST00000555746 CHAC1Q9BUX1 264 aa2□□□□□ -2.09
SRP54-209ENST00000555746 NPCDR1Q9BY65 106 aa2□□□□□ -2.09
SRP54-209ENST00000555746 PKHD1P08F94 4074 aa1.99□□□□□ -2.09
SRP54-209ENST00000555746 DNAH3Q8TD57 4116 aa1.99□□□□□ -2.09
SRP54-209ENST00000555746 IGHV5-51A0A0C4DH38 117 aa1.99□□□□□ -2.09
SRP54-209ENST00000555746 IGKV1-9A0A0C4DH69 117 aa1.99□□□□□ -2.09
SRP54-209ENST00000555746 UBE2L5PA0A1B0GUS4 154 aa1.99□□□□□ -2.09
SRP54-209ENST00000555746 KANTRA0A1W2PQU2 76 aa1.99□□□□□ -2.09
SRP54-209ENST00000555746 INS-IGF2F8WCM5 200 aa1.99□□□□□ -2.09
SRP54-209ENST00000555746 K7EIL1 84 aa1.99□□□□□ -2.09
SRP54-209ENST00000555746 ATOX1O00244 68 aa1.99□□□□□ -2.09
SRP54-209ENST00000555746 SDCBPO00560 298 aaPredicted RBP1.99□□□□□ -2.09
SRP54-209ENST00000555746 OR1I1O60431 355 aa1.99□□□□□ -2.09
SRP54-209ENST00000555746 SLC25A14O95258 325 aaPredicted RBP1.99□□□□□ -2.09
SRP54-209ENST00000555746 C1QAP02745 245 aa1.99□□□□□ -2.09
SRP54-209ENST00000555746 PIRTP0C851 137 aa1.99□□□□□ -2.09
SRP54-209ENST00000555746 TLX1NBP0CAT3 122 aa1.99□□□□□ -2.09
SRP54-209ENST00000555746 ZNF823P16415 610 aa1.99□□□□□ -2.09
SRP54-209ENST00000555746 CBLN1P23435 193 aa1.99□□□□□ -2.09
SRP54-209ENST00000555746 FAUP35544 74 aaKnown RBP1.99□□□□□ -2.09
SRP54-209ENST00000555746 FGF12P61328 243 aa1.99□□□□□ -2.09
SRP54-209ENST00000555746 PCBD1P61457 104 aa1.99□□□□□ -2.09
SRP54-209ENST00000555746 UBE2L3P68036 154 aaKnown RBP1.99□□□□□ -2.09
SRP54-209ENST00000555746 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.99□□□□□ -2.09
SRP54-209ENST00000555746 MIC13Q5XKP0 118 aa1.99□□□□□ -2.09
SRP54-209ENST00000555746 C12orf73Q69YU5 71 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms