RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 KIF25-AS1Q9Y6Z4 181 aa7.06□□□□□ -1.28
PSEN1-213ENST00000555386 CSMD3Q7Z407 3707 aa7.06□□□□□ -1.28
PSEN1-213ENST00000555386 SMIM9A6NGZ8 99 aa7.05□□□□□ -1.28
PSEN1-213ENST00000555386 NPSP0C0P6 89 aa7.05□□□□□ -1.28
PSEN1-213ENST00000555386 PLNP26678 52 aa7.05□□□□□ -1.28
PSEN1-213ENST00000555386 HSD52Q0P140 79 aa7.05□□□□□ -1.28
PSEN1-213ENST00000555386 SYT8Q8NBV8 401 aa7.05□□□□□ -1.28
PSEN1-213ENST00000555386 C9orf85Q96MD7 179 aa7.05□□□□□ -1.28
PSEN1-213ENST00000555386 C11orf68Q9H3H3 251 aaKnown RBP7.05□□□□□ -1.28
PSEN1-213ENST00000555386 HIGD1BQ9P298 99 aa7.05□□□□□ -1.28
PSEN1-213ENST00000555386 TP73-AS1Q9UF72 201 aa7.05□□□□□ -1.28
PSEN1-213ENST00000555386 NACAE9PAV3 2078 aa7.05□□□□□ -1.28
PSEN1-213ENST00000555386 PLECQ15149 4684 aaKnown RBP7.05□□□□□ -1.28
PSEN1-213ENST00000555386 TAX1BP3O14907 124 aa7.04□□□□□ -1.28
PSEN1-213ENST00000555386 MGPP08493 103 aa7.04□□□□□ -1.28
PSEN1-213ENST00000555386 LINC00315P59091 139 aa7.04□□□□□ -1.28
PSEN1-213ENST00000555386 UBE2V1Q13404 147 aa7.04□□□□□ -1.28
PSEN1-213ENST00000555386 FAM222AQ5U5X8 452 aa7.04□□□□□ -1.28
PSEN1-213ENST00000555386 TENM2Q9NT68 2774 aa7.04□□□□□ -1.28
PSEN1-213ENST00000555386 IGHV1OR15-1A0A075B7D0 117 aa7.04□□□□□ -1.28
PSEN1-213ENST00000555386 IGHV3-16A0A0C4DH30 117 aa7.04□□□□□ -1.28
PSEN1-213ENST00000555386 A6NDN8 102 aa7.04□□□□□ -1.28
PSEN1-213ENST00000555386 H7C1H1 209 aa7.04□□□□□ -1.28
PSEN1-213ENST00000555386 NMUP48645 174 aa7.04□□□□□ -1.28
PSEN1-213ENST00000555386 NOP10Q9NPE3 64 aaKnown RBP7.04□□□□□ -1.28
PSEN1-213ENST00000555386 DYNC2H1Q8NCM8 4307 aaKnown RBP7.03□□□□□ -1.28
PSEN1-213ENST00000555386 TRGV11A0A075B6L2 103 aa7.03□□□□□ -1.28
PSEN1-213ENST00000555386 TRBV6-5A0A0K0K1A5 114 aa7.03□□□□□ -1.28
PSEN1-213ENST00000555386 F8VRH5 84 aa7.03□□□□□ -1.28
PSEN1-213ENST00000555386 FAM229AH3BQW9 127 aa7.03□□□□□ -1.28
PSEN1-213ENST00000555386 SPART-AS1P0CW21 52 aa7.03□□□□□ -1.28
PSEN1-213ENST00000555386 DEFB130BP0DP73 79 aa7.03□□□□□ -1.28
PSEN1-213ENST00000555386 DEFB130AP0DP74 79 aa7.03□□□□□ -1.28
PSEN1-213ENST00000555386 HTN3P15516 51 aa7.03□□□□□ -1.28
PSEN1-213ENST00000555386 RPL39LQ96EH5 51 aaKnown RBP7.03□□□□□ -1.28
PSEN1-213ENST00000555386 C16orf74Q96GX8 76 aa7.03□□□□□ -1.28
PSEN1-213ENST00000555386 SCGB3A1Q96QR1 104 aa7.03□□□□□ -1.28
PSEN1-213ENST00000555386 MRPL35Q9NZE8 188 aaKnown RBP7.03□□□□□ -1.28
PSEN1-213ENST00000555386 VCYO14598 125 aa7.02□□□□□ -1.29
PSEN1-213ENST00000555386 PTTG1IPP53801 180 aa7.02□□□□□ -1.29
PSEN1-213ENST00000555386 POLR2KP53803 58 aaKnown RBP7.02□□□□□ -1.29
PSEN1-213ENST00000555386 ZC2HC1BQ5TFG8 222 aa7.02□□□□□ -1.29
PSEN1-213ENST00000555386 C2orf66Q6UXQ4 117 aa7.02□□□□□ -1.29
PSEN1-213ENST00000555386 Q6ZTC4 211 aa7.02□□□□□ -1.29
PSEN1-213ENST00000555386 ERASQ7Z444 233 aa7.02□□□□□ -1.29
PSEN1-213ENST00000555386 NEXN-AS1Q8NBZ9 246 aa7.02□□□□□ -1.29
PSEN1-213ENST00000555386 TMEM263Q8WUH6 116 aaKnown RBP7.02□□□□□ -1.29
PSEN1-213ENST00000555386 H3BRM9 83 aa7.01□□□□□ -1.29
PSEN1-213ENST00000555386 DAD1P61803 113 aa7.01□□□□□ -1.29
PSEN1-213ENST00000555386 C12orf74Q32Q52 190 aa7.01□□□□□ -1.29
PSEN1-213ENST00000555386 SUMO4Q6EEV6 95 aa7.01□□□□□ -1.29
PSEN1-213ENST00000555386 PCP2Q8IVA1 136 aa7.01□□□□□ -1.29
PSEN1-213ENST00000555386 RNASE8Q8TDE3 154 aaKnown RBP7.01□□□□□ -1.29
PSEN1-213ENST00000555386 PHLDA1Q8WV24 401 aaPredicted RBP7.01□□□□□ -1.29
PSEN1-213ENST00000555386 KIR2DL4Q99706 377 aa7.01□□□□□ -1.29
PSEN1-213ENST00000555386 CYSLTR1Q9Y271 337 aa7.01□□□□□ -1.29
PSEN1-213ENST00000555386 MUC4Q99102 2169 aa7.01□□□□□ -1.29
PSEN1-213ENST00000555386 TRBV27A0A0K0K1C4 114 aa7□□□□□ -1.29
PSEN1-213ENST00000555386 GAGE12BA1L429 117 aa7□□□□□ -1.29
PSEN1-213ENST00000555386 PLAC8L1A1L4L8 177 aa7□□□□□ -1.29
PSEN1-213ENST00000555386 C3orf84H3BNL1 204 aa7□□□□□ -1.29
PSEN1-213ENST00000555386 CCL25O15444 150 aa7□□□□□ -1.29
PSEN1-213ENST00000555386 GAGE7O76087 117 aa7□□□□□ -1.29
PSEN1-213ENST00000555386 GAGE12FP0CL80 117 aa7□□□□□ -1.29
PSEN1-213ENST00000555386 GAGE12GP0CL81 117 aa7□□□□□ -1.29
PSEN1-213ENST00000555386 GAGE12IP0CL82 117 aa7□□□□□ -1.29
PSEN1-213ENST00000555386 VAMP3Q15836 100 aa7□□□□□ -1.29
PSEN1-213ENST00000555386 TAL2Q16559 108 aa7□□□□□ -1.29
PSEN1-213ENST00000555386 PAPPA-AS1Q5QFB9 102 aa7□□□□□ -1.29
PSEN1-213ENST00000555386 PIK3CD-AS1Q5SR53 167 aa7□□□□□ -1.29
PSEN1-213ENST00000555386 CASC10Q5T4H9 136 aa7□□□□□ -1.29
PSEN1-213ENST00000555386 TMEM141Q96I45 108 aa7□□□□□ -1.29
PSEN1-213ENST00000555386 MDFICQ9P1T7 246 aa7□□□□□ -1.29
PSEN1-213ENST00000555386 CHTOPQ9Y3Y2 248 aaKnown RBP7□□□□□ -1.29
PSEN1-213ENST00000555386 IGKV2D-26A0A0A0MRZ7 120 aa6.99□□□□□ -1.29
PSEN1-213ENST00000555386 TRGV1A0A0A0MS02 117 aa6.99□□□□□ -1.29
PSEN1-213ENST00000555386 ZNF415Q09FC8 603 aa6.99□□□□□ -1.29
PSEN1-213ENST00000555386 BAALCQ8WXS3 180 aa6.99□□□□□ -1.29
PSEN1-213ENST00000555386 PTH2Q96A98 100 aa6.99□□□□□ -1.29
PSEN1-213ENST00000555386 TIMM17AQ99595 171 aa6.99□□□□□ -1.29
PSEN1-213ENST00000555386 LINC00467Q9BRT7 94 aa6.99□□□□□ -1.29
PSEN1-213ENST00000555386 MRPL16Q9NX20 251 aaKnown RBP6.99□□□□□ -1.29
PSEN1-213ENST00000555386 TRBV25-1A0A075B6N4 114 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 DEFB131BA0A096LNP1 70 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 F5H697 171 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 CRYGDP07320 174 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 RHOHQ15669 191 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 ZFP2Q6ZN57 461 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 Q6ZTI0 123 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 Q6ZVH6 145 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 C11orf72Q8NBR9 251 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 LYSTQ99698 3801 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 CHAC1Q9BUX1 264 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 TRGV2A0A075B6R0 118 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 A0A087WWL8 130 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 SDHAF1A6NFY7 115 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 C9orf118A6NHY6 69 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 IGIPA6NJ69 53 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 LYRM9A8MSI8 78 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 IGLL5B9A064 214 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms