RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 GAGE4Q13068 117 aa12.43□□□□□ -0.42
PSEN1-212ENST00000555254 GAGE5Q13069 117 aa12.43□□□□□ -0.42
PSEN1-212ENST00000555254 GAGE13Q4V321 117 aa12.43□□□□□ -0.42
PSEN1-212ENST00000555254 F5H768 121 aa12.42□□□□□ -0.42
PSEN1-212ENST00000555254 PAX4O43316 350 aa12.42□□□□□ -0.42
PSEN1-212ENST00000555254 HTN3P15516 51 aa12.42□□□□□ -0.42
PSEN1-212ENST00000555254 BTF3P20290 206 aaKnown RBP12.42□□□□□ -0.42
PSEN1-212ENST00000555254 CASC10Q5T4H9 136 aa12.42□□□□□ -0.42
PSEN1-212ENST00000555254 LINC01549A6NIU2 74 aa12.41□□□□□ -0.42
PSEN1-212ENST00000555254 CRYBA4P53673 196 aa12.41□□□□□ -0.42
PSEN1-212ENST00000555254 COTL1Q14019 142 aa12.41□□□□□ -0.42
PSEN1-212ENST00000555254 C12orf74Q32Q52 190 aa12.41□□□□□ -0.42
PSEN1-212ENST00000555254 DAZ4Q86SG3 579 aaKnown RBP12.41□□□□□ -0.42
PSEN1-212ENST00000555254 C11orf45Q8TAV5 145 aa12.41□□□□□ -0.42
PSEN1-212ENST00000555254 DAZ3Q9NR90 486 aaKnown RBP12.41□□□□□ -0.42
PSEN1-212ENST00000555254 KRTDAPP60985 99 aa12.39□□□□□ -0.43
PSEN1-212ENST00000555254 PHLDA1Q8WV24 401 aaPredicted RBP12.39□□□□□ -0.43
PSEN1-212ENST00000555254 ATP5LO75964 103 aa12.38□□□□□ -0.43
PSEN1-212ENST00000555254 TSHBP01222 138 aa12.38□□□□□ -0.43
PSEN1-212ENST00000555254 GYPEP15421 78 aa12.38□□□□□ -0.43
PSEN1-212ENST00000555254 UBE2D3P61077 147 aa12.38□□□□□ -0.43
PSEN1-212ENST00000555254 UBE2D2P62837 147 aa12.38□□□□□ -0.43
PSEN1-212ENST00000555254 MAP1LC3CQ9BXW4 147 aa12.38□□□□□ -0.43
PSEN1-212ENST00000555254 Q9UF83 564 aa12.38□□□□□ -0.43
PSEN1-212ENST00000555254 CYSLTR1Q9Y271 337 aa12.38□□□□□ -0.43
PSEN1-212ENST00000555254 DNAH7Q8WXX0 4024 aa12.38□□□□□ -0.43
PSEN1-212ENST00000555254 HYDINQ4G0P3 5121 aa12.37□□□□□ -0.43
PSEN1-212ENST00000555254 IGHV3-38A0A0C4DH36 116 aa12.37□□□□□ -0.43
PSEN1-212ENST00000555254 TMEM97Q5BJF2 176 aa12.37□□□□□ -0.43
PSEN1-212ENST00000555254 NACAE9PAV3 2078 aa12.37□□□□□ -0.43
PSEN1-212ENST00000555254 LOC100131303A0A0U1RQF7 123 aa12.36□□□□□ -0.43
PSEN1-212ENST00000555254 C2orf66Q6UXQ4 117 aa12.36□□□□□ -0.43
PSEN1-212ENST00000555254 DEFB104AQ8WTQ1 72 aa12.36□□□□□ -0.43
PSEN1-212ENST00000555254 TOMM6Q96B49 74 aa12.36□□□□□ -0.43
PSEN1-212ENST00000555254 SCGB3A1Q96QR1 104 aa12.36□□□□□ -0.43
PSEN1-212ENST00000555254 A0A096LNJ9 63 aa12.35□□□□□ -0.43
PSEN1-212ENST00000555254 A0A0J9YY99 117 aa12.35□□□□□ -0.43
PSEN1-212ENST00000555254 NANOS2P60321 138 aaKnown RBP12.35□□□□□ -0.43
PSEN1-212ENST00000555254 SH2D6Q7Z4S9 175 aa12.35□□□□□ -0.43
PSEN1-212ENST00000555254 IFI27L1Q96BM0 104 aa12.35□□□□□ -0.43
PSEN1-212ENST00000555254 TRAV26-1A0A087WT03 109 aa12.34□□□□□ -0.43
PSEN1-212ENST00000555254 SCGB1D1O95968 90 aa12.34□□□□□ -0.43
PSEN1-212ENST00000555254 SMAGPQ0VAQ4 97 aa12.34□□□□□ -0.43
PSEN1-212ENST00000555254 ATP6V0E2Q8NHE4 81 aa12.34□□□□□ -0.43
PSEN1-212ENST00000555254 C20orf202A1L168 122 aa12.33□□□□□ -0.44
PSEN1-212ENST00000555254 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.33□□□□□ -0.44
PSEN1-212ENST00000555254 C3orf79P0CE67 100 aa12.33□□□□□ -0.44
PSEN1-212ENST00000555254 MRPL23Q16540 153 aaKnown RBP12.33□□□□□ -0.44
PSEN1-212ENST00000555254 Q6ZTC4 211 aa12.33□□□□□ -0.44
PSEN1-212ENST00000555254 C20orf203Q8NBC4 194 aa12.33□□□□□ -0.44
PSEN1-212ENST00000555254 ICOSQ9Y6W8 199 aa12.33□□□□□ -0.44
PSEN1-212ENST00000555254 SACSQ9NZJ4 4579 aa12.33□□□□□ -0.44
PSEN1-212ENST00000555254 PRSS1P07477 247 aa12.32□□□□□ -0.44
PSEN1-212ENST00000555254 PET117Q6UWS5 81 aa12.32□□□□□ -0.44
PSEN1-212ENST00000555254 Q6ZN92 141 aa12.32□□□□□ -0.44
PSEN1-212ENST00000555254 LINC00173Q6ZV60 143 aa12.32□□□□□ -0.44
PSEN1-212ENST00000555254 GTSF1LQ9H1H1 148 aa12.32□□□□□ -0.44
PSEN1-212ENST00000555254 DEFB131BA0A096LNP1 70 aa12.31□□□□□ -0.44
PSEN1-212ENST00000555254 JOSD1Q15040 202 aaPredicted RBP12.31□□□□□ -0.44
PSEN1-212ENST00000555254 ERASQ7Z444 233 aa12.31□□□□□ -0.44
PSEN1-212ENST00000555254 TMEM141Q96I45 108 aa12.31□□□□□ -0.44
PSEN1-212ENST00000555254 VSIG2Q96IQ7 327 aa12.31□□□□□ -0.44
PSEN1-212ENST00000555254 TRBV25-1A0A075B6N4 114 aa12.3□□□□□ -0.44
PSEN1-212ENST00000555254 TRAV10A0A0B4J240 114 aa12.3□□□□□ -0.44
PSEN1-212ENST00000555254 H0Y8G0 127 aa12.3□□□□□ -0.44
PSEN1-212ENST00000555254 H3BNG1 76 aa12.3□□□□□ -0.44
PSEN1-212ENST00000555254 SYS1-DBNDD2H3BUS1 97 aa12.3□□□□□ -0.44
PSEN1-212ENST00000555254 SMIM6P0DI80 62 aa12.3□□□□□ -0.44
PSEN1-212ENST00000555254 LINC00694P0DN24 101 aa12.3□□□□□ -0.44
PSEN1-212ENST00000555254 TMEM243Q9BU79 118 aa12.3□□□□□ -0.44
PSEN1-212ENST00000555254 PCLOQ9Y6V0 5065 aa12.3□□□□□ -0.44
PSEN1-212ENST00000555254 DNAH1Q9P2D7 4330 aa12.29□□□□□ -0.44
PSEN1-212ENST00000555254 UBE2L6O14933 153 aa12.29□□□□□ -0.44
PSEN1-212ENST00000555254 PAPPA-AS1Q5QFB9 102 aa12.29□□□□□ -0.44
PSEN1-212ENST00000555254 CEMP1Q6PRD7 247 aaPredicted RBP12.29□□□□□ -0.44
PSEN1-212ENST00000555254 CHCHD7Q9BUK0 85 aa12.29□□□□□ -0.44
PSEN1-212ENST00000555254 RPL39P62891 51 aaKnown RBP12.28□□□□□ -0.44
PSEN1-212ENST00000555254 DGAT2L7PQ6IED9 249 aa12.28□□□□□ -0.44
PSEN1-212ENST00000555254 TIMM17AQ99595 171 aa12.28□□□□□ -0.44
PSEN1-212ENST00000555254 NUPR2A6NF83 97 aa12.27□□□□□ -0.45
PSEN1-212ENST00000555254 PYY3Q5JQD4 70 aa12.27□□□□□ -0.45
PSEN1-212ENST00000555254 SPATA12Q7Z6I5 190 aa12.27□□□□□ -0.45
PSEN1-212ENST00000555254 SPANXA1Q9NS26 97 aa12.27□□□□□ -0.45
PSEN1-212ENST00000555254 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.26□□□□□ -0.45
PSEN1-212ENST00000555254 TRBV6-8A0A0A6YYG3 113 aa12.26□□□□□ -0.45
PSEN1-212ENST00000555254 IGKV2-29A2NJV5 120 aaPredicted RBP12.26□□□□□ -0.45
PSEN1-212ENST00000555254 H7C423 109 aa12.26□□□□□ -0.45
PSEN1-212ENST00000555254 AMMECR1LQ6DCA0 310 aa12.26□□□□□ -0.45
PSEN1-212ENST00000555254 KLK5Q9Y337 293 aaPredicted RBP12.26□□□□□ -0.45
PSEN1-212ENST00000555254 PYGO1Q9Y3Y4 419 aa12.26□□□□□ -0.45
PSEN1-212ENST00000555254 A0A096LPF7 62 aa12.25□□□□□ -0.45
PSEN1-212ENST00000555254 IGIPA6NJ69 53 aa12.25□□□□□ -0.45
PSEN1-212ENST00000555254 NPSP0C0P6 89 aa12.25□□□□□ -0.45
PSEN1-212ENST00000555254 NTM-AS1Q6ZSK4 140 aa12.25□□□□□ -0.45
PSEN1-212ENST00000555254 CHCHD5Q9BSY4 110 aa12.25□□□□□ -0.45
PSEN1-212ENST00000555254 TIMM21Q9BVV7 248 aa12.25□□□□□ -0.45
PSEN1-212ENST00000555254 TMEM101Q96IK0 257 aa12.24□□□□□ -0.45
PSEN1-212ENST00000555254 VCX2Q9H322 139 aa12.24□□□□□ -0.45
PSEN1-212ENST00000555254 STARD9Q9P2P6 4700 aa12.24□□□□□ -0.45
PSEN1-212ENST00000555254 CSMD3Q7Z407 3707 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms