RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 NOP10Q9NPE3 64 aaKnown RBP9.18□□□□□ -0.94
VIPAS39-206ENST00000553888 MAST4O15021 2626 aa9.17□□□□□ -0.94
VIPAS39-206ENST00000553888 LGALS9BQ3B8N2 356 aa9.17□□□□□ -0.94
VIPAS39-206ENST00000553888 ORMDL2Q53FV1 153 aa9.17□□□□□ -0.94
VIPAS39-206ENST00000553888 C9orf66Q5T8R8 295 aa9.17□□□□□ -0.94
VIPAS39-206ENST00000553888 ZC2HC1BQ5TFG8 222 aa9.17□□□□□ -0.94
VIPAS39-206ENST00000553888 LGALS9CQ6DKI2 356 aa9.17□□□□□ -0.94
VIPAS39-206ENST00000553888 ZFP2Q6ZN57 461 aa9.17□□□□□ -0.94
VIPAS39-206ENST00000553888 IL17DQ8TAD2 202 aa9.17□□□□□ -0.94
VIPAS39-206ENST00000553888 TOMM6Q96B49 74 aa9.17□□□□□ -0.94
VIPAS39-206ENST00000553888 PLAC8L1A1L4L8 177 aa9.16□□□□□ -0.94
VIPAS39-206ENST00000553888 A8MWV9 139 aa9.16□□□□□ -0.94
VIPAS39-206ENST00000553888 PPP1R17O96001 155 aa9.16□□□□□ -0.94
VIPAS39-206ENST00000553888 GTSCR1Q86UQ5 136 aa9.16□□□□□ -0.94
VIPAS39-206ENST00000553888 SCGB3A1Q96QR1 104 aa9.16□□□□□ -0.94
VIPAS39-206ENST00000553888 VCYO14598 125 aa9.16□□□□□ -0.94
VIPAS39-206ENST00000553888 RS1O15537 224 aa9.16□□□□□ -0.94
VIPAS39-206ENST00000553888 Q6ZN92 141 aa9.16□□□□□ -0.94
VIPAS39-206ENST00000553888 TP53TG1Q9Y2A0 90 aa9.16□□□□□ -0.94
VIPAS39-206ENST00000553888 TRBV6-5A0A0K0K1A5 114 aa9.15□□□□□ -0.94
VIPAS39-206ENST00000553888 TRBV27A0A0K0K1C4 114 aa9.15□□□□□ -0.94
VIPAS39-206ENST00000553888 EMP1P54849 157 aa9.15□□□□□ -0.94
VIPAS39-206ENST00000553888 TMEM263Q8WUH6 116 aaKnown RBP9.15□□□□□ -0.94
VIPAS39-206ENST00000553888 UQCR10Q9UDW1 63 aa9.15□□□□□ -0.94
VIPAS39-206ENST00000553888 TSHBP01222 138 aa9.15□□□□□ -0.95
VIPAS39-206ENST00000553888 KIR2DL4Q99706 377 aa9.15□□□□□ -0.95
VIPAS39-206ENST00000553888 MRPL35Q9NZE8 188 aaKnown RBP9.15□□□□□ -0.95
VIPAS39-206ENST00000553888 IGHV3-38A0A0C4DH36 116 aa9.14□□□□□ -0.95
VIPAS39-206ENST00000553888 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.14□□□□□ -0.95
VIPAS39-206ENST00000553888 ATP5LO75964 103 aa9.14□□□□□ -0.95
VIPAS39-206ENST00000553888 PRIMA1Q86XR5 153 aa9.14□□□□□ -0.95
VIPAS39-206ENST00000553888 ZNF561-AS1K7EIQ3 104 aa9.14□□□□□ -0.95
VIPAS39-206ENST00000553888 OPRPNQ99935 248 aaPredicted RBP9.14□□□□□ -0.95
VIPAS39-206ENST00000553888 INSL3P51460 131 aa9.13□□□□□ -0.95
VIPAS39-206ENST00000553888 NEXN-AS1Q8NBZ9 246 aa9.13□□□□□ -0.95
VIPAS39-206ENST00000553888 PHLDA1Q8WV24 401 aaPredicted RBP9.13□□□□□ -0.95
VIPAS39-206ENST00000553888 ANK2Q01484 3957 aa9.13□□□□□ -0.95
VIPAS39-206ENST00000553888 GAGE7O76087 117 aa9.13□□□□□ -0.95
VIPAS39-206ENST00000553888 GAGE12FP0CL80 117 aa9.13□□□□□ -0.95
VIPAS39-206ENST00000553888 GAGE12GP0CL81 117 aa9.13□□□□□ -0.95
VIPAS39-206ENST00000553888 GAGE12IP0CL82 117 aa9.13□□□□□ -0.95
VIPAS39-206ENST00000553888 BAALCQ8WXS3 180 aa9.13□□□□□ -0.95
VIPAS39-206ENST00000553888 HNRNPA3P51991 378 aaKnown RBP9.12□□□□□ -0.95
VIPAS39-206ENST00000553888 C12orf54Q6X4T0 127 aa9.12□□□□□ -0.95
VIPAS39-206ENST00000553888 RRN3P1Q2M238 152 aa9.12□□□□□ -0.95
VIPAS39-206ENST00000553888 C1QTNF4Q9BXJ3 329 aa9.12□□□□□ -0.95
VIPAS39-206ENST00000553888 TTTY13Q9BZ97 58 aa9.12□□□□□ -0.95
VIPAS39-206ENST00000553888 CYSLTR1Q9Y271 337 aa9.12□□□□□ -0.95
VIPAS39-206ENST00000553888 HHLA3Q9XRX5 114 aa9.11□□□□□ -0.95
VIPAS39-206ENST00000553888 COL6A5A8TX70 2615 aa9.11□□□□□ -0.95
VIPAS39-206ENST00000553888 IGKV2D-26A0A0A0MRZ7 120 aa9.11□□□□□ -0.95
VIPAS39-206ENST00000553888 I3L3M4 83 aa9.11□□□□□ -0.95
VIPAS39-206ENST00000553888 K7EMI3 77 aa9.11□□□□□ -0.95
VIPAS39-206ENST00000553888 PIK3CD-AS1Q5SR53 167 aa9.11□□□□□ -0.95
VIPAS39-206ENST00000553888 C16orf74Q96GX8 76 aa9.11□□□□□ -0.95
VIPAS39-206ENST00000553888 ZMAT4Q9H898 229 aa9.11□□□□□ -0.95
VIPAS39-206ENST00000553888 A0A087WX48 190 aa9.11□□□□□ -0.95
VIPAS39-206ENST00000553888 H7C1H1 209 aa9.11□□□□□ -0.95
VIPAS39-206ENST00000553888 IGKCP01834 107 aa9.11□□□□□ -0.95
VIPAS39-206ENST00000553888 IGIPA6NJ69 53 aa9.1□□□□□ -0.95
VIPAS39-206ENST00000553888 NMUP48645 174 aa9.1□□□□□ -0.95
VIPAS39-206ENST00000553888 CEMP1Q6PRD7 247 aaPredicted RBP9.1□□□□□ -0.95
VIPAS39-206ENST00000553888 PCP2Q8IVA1 136 aa9.1□□□□□ -0.95
VIPAS39-206ENST00000553888 WFDC9Q8NEX5 89 aa9.1□□□□□ -0.95
VIPAS39-206ENST00000553888 PRSS29PA6NIE9 313 aa9.09□□□□□ -0.95
VIPAS39-206ENST00000553888 RHODO00212 210 aa9.09□□□□□ -0.95
VIPAS39-206ENST00000553888 DEFB4AO15263 64 aa9.09□□□□□ -0.95
VIPAS39-206ENST00000553888 DPM2O94777 84 aa9.09□□□□□ -0.95
VIPAS39-206ENST00000553888 DEFB135Q30KP9 77 aa9.09□□□□□ -0.95
VIPAS39-206ENST00000553888 TRGV2A0A075B6R0 118 aa9.09□□□□□ -0.95
VIPAS39-206ENST00000553888 HINT1P49773 126 aaPredicted RBP9.09□□□□□ -0.95
VIPAS39-206ENST00000553888 KIR2DL5BQ8NHK3 375 aa9.09□□□□□ -0.95
VIPAS39-206ENST00000553888 EDA2RQ9HAV5 297 aa9.09□□□□□ -0.95
VIPAS39-206ENST00000553888 DAZ2Q13117 558 aaKnown RBP9.08□□□□□ -0.96
VIPAS39-206ENST00000553888 SLC25A34Q6PIV7 304 aa9.08□□□□□ -0.96
VIPAS39-206ENST00000553888 GTF2H5Q6ZYL4 71 aa9.08□□□□□ -0.96
VIPAS39-206ENST00000553888 ERG28Q9UKR5 140 aa9.08□□□□□ -0.96
VIPAS39-206ENST00000553888 LOC100131303A0A0U1RQF7 123 aa9.08□□□□□ -0.96
VIPAS39-206ENST00000553888 C3orf56Q8N813 242 aa9.08□□□□□ -0.96
VIPAS39-206ENST00000553888 ZNRF2Q8NHG8 242 aa9.08□□□□□ -0.96
VIPAS39-206ENST00000553888 X6R8D5 127 aa9.08□□□□□ -0.96
VIPAS39-206ENST00000553888 COX8AP10176 69 aa9.08□□□□□ -0.96
VIPAS39-206ENST00000553888 FGF6P10767 208 aa9.08□□□□□ -0.96
VIPAS39-206ENST00000553888 RNASE13Q5GAN3 156 aaKnown RBP9.08□□□□□ -0.96
VIPAS39-206ENST00000553888 AMMECR1LQ6DCA0 310 aa9.08□□□□□ -0.96
VIPAS39-206ENST00000553888 SLC25A29Q8N8R3 303 aa9.08□□□□□ -0.96
VIPAS39-206ENST00000553888 C20orf203Q8NBC4 194 aa9.08□□□□□ -0.96
VIPAS39-206ENST00000553888 TRAV4A0A0B4J268 109 aa9.07□□□□□ -0.96
VIPAS39-206ENST00000553888 DEFB130BP0DP73 79 aa9.07□□□□□ -0.96
VIPAS39-206ENST00000553888 DEFB130AP0DP74 79 aa9.07□□□□□ -0.96
VIPAS39-206ENST00000553888 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.07□□□□□ -0.96
VIPAS39-206ENST00000553888 IGKV2-29A2NJV5 120 aaPredicted RBP9.07□□□□□ -0.96
VIPAS39-206ENST00000553888 F8VRH5 84 aa9.07□□□□□ -0.96
VIPAS39-206ENST00000553888 TRAV12-1A0A0B4J245 112 aa9.06□□□□□ -0.96
VIPAS39-206ENST00000553888 HSD52Q0P140 79 aa9.06□□□□□ -0.96
VIPAS39-206ENST00000553888 RHOHQ15669 191 aa9.06□□□□□ -0.96
VIPAS39-206ENST00000553888 GAGE12HA6NDE8 117 aa9.06□□□□□ -0.96
VIPAS39-206ENST00000553888 KRTAP10-11P60412 298 aa9.06□□□□□ -0.96
VIPAS39-206ENST00000553888 C2orf91Q6ZV80 131 aa9.06□□□□□ -0.96
VIPAS39-206ENST00000553888 GAGE12JA6NER3 117 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms