RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 RAB14P61106 215 aa11.82□□□□□ -0.52
SHMT2-206ENST00000553529 REG3AQ06141 175 aa11.82□□□□□ -0.52
SHMT2-206ENST00000553529 TEX261Q6UWH6 196 aa11.82□□□□□ -0.52
SHMT2-206ENST00000553529 LINC01551Q86U37 167 aa11.82□□□□□ -0.52
SHMT2-206ENST00000553529 LINC00528Q8N1L1 170 aa11.82□□□□□ -0.52
SHMT2-206ENST00000553529 FAM210AQ96ND0 272 aa11.82□□□□□ -0.52
SHMT2-206ENST00000553529 TMEM243Q9BU79 118 aa11.82□□□□□ -0.52
SHMT2-206ENST00000553529 FAM231DQ6ZW35 169 aa11.81□□□□□ -0.52
SHMT2-206ENST00000553529 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-206ENST00000553529 SMIM7Q9BQ49 75 aa11.81□□□□□ -0.52
SHMT2-206ENST00000553529 HERC1Q15751 4861 aa11.81□□□□□ -0.52
SHMT2-206ENST00000553529 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-206ENST00000553529 IGKV2-29A2NJV5 120 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-206ENST00000553529 PANO1I0J062 215 aa11.8□□□□□ -0.52
SHMT2-206ENST00000553529 MIAQ16674 131 aa11.8□□□□□ -0.52
SHMT2-206ENST00000553529 TMEM97Q5BJF2 176 aa11.8□□□□□ -0.52
SHMT2-206ENST00000553529 WDR73Q6P4I2 378 aa11.8□□□□□ -0.52
SHMT2-206ENST00000553529 IGKV3OR2-268A0A0C4DH90 116 aa11.79□□□□□ -0.52
SHMT2-206ENST00000553529 AMTP48728 403 aa11.79□□□□□ -0.52
SHMT2-206ENST00000553529 FLG2Q5D862 2391 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-206ENST00000553529 ZNF727A8MUV8 499 aa11.78□□□□□ -0.52
SHMT2-206ENST00000553529 FAM229AH3BQW9 127 aa11.78□□□□□ -0.52
SHMT2-206ENST00000553529 RPS10P46783 165 aaKnown RBP11.78□□□□□ -0.52
SHMT2-206ENST00000553529 CIRBP-AS1Q8TBR5 109 aa11.78□□□□□ -0.52
SHMT2-206ENST00000553529 RNF185Q96GF1 192 aa11.78□□□□□ -0.52
SHMT2-206ENST00000553529 SMKR1H3BMG3 65 aa11.77□□□□□ -0.53
SHMT2-206ENST00000553529 COTL1Q14019 142 aa11.77□□□□□ -0.53
SHMT2-206ENST00000553529 HIGD1CA8MV81 97 aa11.76□□□□□ -0.53
SHMT2-206ENST00000553529 SLPIP03973 132 aa11.76□□□□□ -0.53
SHMT2-206ENST00000553529 KRTAP10-4P60372 401 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-206ENST00000553529 IFITM2Q01629 132 aa11.76□□□□□ -0.53
SHMT2-206ENST00000553529 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-206ENST00000553529 V9GYV3 84 aa11.76□□□□□ -0.53
SHMT2-206ENST00000553529 SRRM2Q9UQ35 2752 aaKnown RBP11.76□□□□□ -0.53
SHMT2-206ENST00000553529 A8MWL6 223 aa11.75□□□□□ -0.53
SHMT2-206ENST00000553529 NCR2O95944 276 aa11.75□□□□□ -0.53
SHMT2-206ENST00000553529 PKIAP61925 76 aa11.75□□□□□ -0.53
SHMT2-206ENST00000553529 AMN1Q8IY45 258 aa11.75□□□□□ -0.53
SHMT2-206ENST00000553529 CHAC1Q9BUX1 264 aa11.75□□□□□ -0.53
SHMT2-206ENST00000553529 FAM231BA6NCW3 169 aa11.74□□□□□ -0.53
SHMT2-206ENST00000553529 SDHAF1A6NFY7 115 aa11.74□□□□□ -0.53
SHMT2-206ENST00000553529 UBE2L6O14933 153 aa11.74□□□□□ -0.53
SHMT2-206ENST00000553529 TSKUQ8WUA8 353 aa11.74□□□□□ -0.53
SHMT2-206ENST00000553529 A0A1B0GUV1 79 aa11.73□□□□□ -0.53
SHMT2-206ENST00000553529 RPL23P62829 140 aaKnown RBP11.73□□□□□ -0.53
SHMT2-206ENST00000553529 CT83Q5H943 113 aa11.73□□□□□ -0.53
SHMT2-206ENST00000553529 ISOC2Q96AB3 205 aa11.73□□□□□ -0.53
SHMT2-206ENST00000553529 TMEM242Q9NWH2 141 aa11.73□□□□□ -0.53
SHMT2-206ENST00000553529 TSHBP01222 138 aa11.72□□□□□ -0.53
SHMT2-206ENST00000553529 OSTCQ9NRP0 149 aa11.72□□□□□ -0.53
SHMT2-206ENST00000553529 GAGE12HA6NDE8 117 aa11.71□□□□□ -0.53
SHMT2-206ENST00000553529 RAB4AP20338 218 aa11.71□□□□□ -0.53
SHMT2-206ENST00000553529 C14orf177Q52M58 125 aa11.71□□□□□ -0.53
SHMT2-206ENST00000553529 RNASEKQ6P5S7 137 aaKnown RBP11.71□□□□□ -0.53
SHMT2-206ENST00000553529 NUP35Q8NFH5 326 aa11.71□□□□□ -0.53
SHMT2-206ENST00000553529 A0A1B0GUT8 65 aa11.7□□□□□ -0.54
SHMT2-206ENST00000553529 hDV102S1A0JD36 115 aa11.7□□□□□ -0.54
SHMT2-206ENST00000553529 APCSP02743 223 aa11.7□□□□□ -0.54
SHMT2-206ENST00000553529 CHTF8P0CG12 524 aa11.7□□□□□ -0.54
SHMT2-206ENST00000553529 FGF6P10767 208 aa11.7□□□□□ -0.54
SHMT2-206ENST00000553529 ADIRFQ15847 76 aa11.7□□□□□ -0.54
SHMT2-206ENST00000553529 SMIM15Q7Z3B0 74 aa11.7□□□□□ -0.54
SHMT2-206ENST00000553529 C15orf56Q8N910 161 aa11.7□□□□□ -0.54
SHMT2-206ENST00000553529 HIGD2BQ4VC39 106 aa11.69□□□□□ -0.54
SHMT2-206ENST00000553529 CLLU1Q5K131 121 aa11.69□□□□□ -0.54
SHMT2-206ENST00000553529 C9orf163Q8N9P6 203 aa11.69□□□□□ -0.54
SHMT2-206ENST00000553529 PMCHP20382 165 aa11.68□□□□□ -0.54
SHMT2-206ENST00000553529 HNRNPA3P51991 378 aaKnown RBP11.68□□□□□ -0.54
SHMT2-206ENST00000553529 TMEM241Q24JQ0 296 aa11.68□□□□□ -0.54
SHMT2-206ENST00000553529 TMEM191AQ9H0A3 160 aa11.68□□□□□ -0.54
SHMT2-206ENST00000553529 TRBV6-5A0A0K0K1A5 114 aa11.67□□□□□ -0.54
SHMT2-206ENST00000553529 I3L3M4 83 aa11.67□□□□□ -0.54
SHMT2-206ENST00000553529 AMMECR1LQ6DCA0 310 aa11.67□□□□□ -0.54
SHMT2-206ENST00000553529 SDIM1Q6ZPB5 146 aa11.67□□□□□ -0.54
SHMT2-206ENST00000553529 BORCS7Q96B45 105 aa11.67□□□□□ -0.54
SHMT2-206ENST00000553529 LRP1Q07954 4544 aaKnown RBP11.67□□□□□ -0.54
SHMT2-206ENST00000553529 TRAV8-4A0A0B4J246 113 aa11.66□□□□□ -0.54
SHMT2-206ENST00000553529 PLA2G1BP04054 148 aaKnown RBP11.66□□□□□ -0.54
SHMT2-206ENST00000553529 ESDP10768 282 aa11.66□□□□□ -0.54
SHMT2-206ENST00000553529 NRACQ8N912 160 aa11.66□□□□□ -0.54
SHMT2-206ENST00000553529 CHCHD10Q8WYQ3 142 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-206ENST00000553529 LINC00526Q96FQ7 95 aa11.66□□□□□ -0.54
SHMT2-206ENST00000553529 ST20Q9HBF5 79 aa11.66□□□□□ -0.54
SHMT2-206ENST00000553529 PKHD1L1Q86WI1 4243 aa11.66□□□□□ -0.54
SHMT2-206ENST00000553529 NDUFS6O75380 124 aaKnown RBP11.65□□□□□ -0.54
SHMT2-206ENST00000553529 POLR2KP53803 58 aaKnown RBP11.65□□□□□ -0.54
SHMT2-206ENST00000553529 RNASE13Q5GAN3 156 aaKnown RBP11.65□□□□□ -0.54
SHMT2-206ENST00000553529 NDUFA5Q16718 116 aa11.64□□□□□ -0.55
SHMT2-206ENST00000553529 DGAT2L7PQ6IED9 249 aa11.64□□□□□ -0.55
SHMT2-206ENST00000553529 NAT8Q9UHE5 227 aa11.64□□□□□ -0.55
SHMT2-206ENST00000553529 XCL1P47992 114 aa11.63□□□□□ -0.55
SHMT2-206ENST00000553529 CAMPP49913 170 aa11.63□□□□□ -0.55
SHMT2-206ENST00000553529 CNBPP62633 177 aaKnown RBP11.63□□□□□ -0.55
SHMT2-206ENST00000553529 FOXI1Q12951 378 aa11.63□□□□□ -0.55
SHMT2-206ENST00000553529 MRPL51Q4U2R6 128 aaKnown RBP11.63□□□□□ -0.55
SHMT2-206ENST00000553529 SMIM27A0A1W2PRY6 76 aa11.62□□□□□ -0.55
SHMT2-206ENST00000553529 RIGQ13278 110 aa11.62□□□□□ -0.55
SHMT2-206ENST00000553529 MRPL54Q6P161 138 aaKnown RBP11.62□□□□□ -0.55
SHMT2-206ENST00000553529 FAT3Q8TDW7 4589 aa11.62□□□□□ -0.55
SHMT2-206ENST00000553529 FAM74A3Q4VXF1 159 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms