RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 A0A1W2PPM0 123 aa13.55□□□□□ -0.24
LRP1-204ENST00000553277 RBMY1BA6NDE4 496 aaKnown RBP13.55□□□□□ -0.24
LRP1-204ENST00000553277 RBMY1EA6NEQ0 496 aaKnown RBP13.55□□□□□ -0.24
LRP1-204ENST00000553277 I3L3M4 83 aa13.55□□□□□ -0.24
LRP1-204ENST00000553277 RBMY1DP0C7P1 496 aaKnown RBP13.55□□□□□ -0.24
LRP1-204ENST00000553277 HERVK_113P61574 105 aa13.55□□□□□ -0.24
LRP1-204ENST00000553277 OR5A1Q8NGJ0 315 aa13.55□□□□□ -0.24
LRP1-204ENST00000553277 PHLDA1Q8WV24 401 aaPredicted RBP13.55□□□□□ -0.24
LRP1-204ENST00000553277 A8MWV9 139 aa13.54□□□□□ -0.24
LRP1-204ENST00000553277 RBMY1A1P0DJD3 496 aaKnown RBP13.54□□□□□ -0.24
LRP1-204ENST00000553277 RBMY1CP0DJD4 496 aa13.54□□□□□ -0.24
LRP1-204ENST00000553277 RBMY1FQ15415 496 aaKnown RBP13.54□□□□□ -0.24
LRP1-204ENST00000553277 PRADC1Q9BSG0 188 aa13.54□□□□□ -0.24
LRP1-204ENST00000553277 TRBV7-3A0A075B6L6 115 aa13.53□□□□□ -0.24
LRP1-204ENST00000553277 C11orf86A6NJI1 115 aa13.53□□□□□ -0.24
LRP1-204ENST00000553277 OXLD1Q5BKU9 147 aa13.53□□□□□ -0.24
LRP1-204ENST00000553277 CBY1Q9Y3M2 126 aa13.53□□□□□ -0.24
LRP1-204ENST00000553277 CMYA5Q8N3K9 4069 aa13.53□□□□□ -0.24
LRP1-204ENST00000553277 M0R2P5 195 aa13.53□□□□□ -0.24
LRP1-204ENST00000553277 FABP2P12104 132 aa13.53□□□□□ -0.24
LRP1-204ENST00000553277 ZNF415Q09FC8 603 aa13.53□□□□□ -0.24
LRP1-204ENST00000553277 STHQ8IWL8 128 aa13.53□□□□□ -0.24
LRP1-204ENST00000553277 A0A1B0GWB2 263 aa13.52□□□□□ -0.25
LRP1-204ENST00000553277 GAGE12BA1L429 117 aa13.52□□□□□ -0.25
LRP1-204ENST00000553277 SAMD5Q5TGI4 173 aa13.52□□□□□ -0.25
LRP1-204ENST00000553277 NFE4Q86UQ8 179 aa13.52□□□□□ -0.25
LRP1-204ENST00000553277 C20orf203Q8NBC4 194 aa13.52□□□□□ -0.25
LRP1-204ENST00000553277 CRYBA4P53673 196 aa13.51□□□□□ -0.25
LRP1-204ENST00000553277 RPL39P62891 51 aaKnown RBP13.51□□□□□ -0.25
LRP1-204ENST00000553277 HIST1H4GQ99525 98 aa13.51□□□□□ -0.25
LRP1-204ENST00000553277 SPXQ9BT56 116 aa13.51□□□□□ -0.25
LRP1-204ENST00000553277 WFDC10AQ9H1F0 79 aa13.51□□□□□ -0.25
LRP1-204ENST00000553277 PYGO1Q9Y3Y4 419 aa13.5□□□□□ -0.25
LRP1-204ENST00000553277 MGAM2Q2M2H8 2515 aa13.5□□□□□ -0.25
LRP1-204ENST00000553277 P0DMU3 169 aa13.5□□□□□ -0.25
LRP1-204ENST00000553277 FAM231AP0DMU4 169 aa13.5□□□□□ -0.25
LRP1-204ENST00000553277 FAM231CP0DMU5 169 aa13.5□□□□□ -0.25
LRP1-204ENST00000553277 RNASE8Q8TDE3 154 aaKnown RBP13.5□□□□□ -0.25
LRP1-204ENST00000553277 RAB37Q96AX2 223 aa13.5□□□□□ -0.25
LRP1-204ENST00000553277 RHODO00212 210 aa13.49□□□□□ -0.25
LRP1-204ENST00000553277 NBEAL1Q6ZS30 2694 aa13.49□□□□□ -0.25
LRP1-204ENST00000553277 INSP01308 110 aa13.48□□□□□ -0.25
LRP1-204ENST00000553277 GIG44P09565 113 aaPredicted RBP13.48□□□□□ -0.25
LRP1-204ENST00000553277 KRTAP10-11P60412 298 aa13.48□□□□□ -0.25
LRP1-204ENST00000553277 NHP2Q9NX24 153 aaKnown RBP13.48□□□□□ -0.25
LRP1-204ENST00000553277 SPCS1Q9Y6A9 102 aa13.48□□□□□ -0.25
LRP1-204ENST00000553277 ZNF815PA8K554 130 aa13.47□□□□□ -0.25
LRP1-204ENST00000553277 C12orf74Q32Q52 190 aa13.47□□□□□ -0.25
LRP1-204ENST00000553277 DNAJC30Q96LL9 226 aa13.47□□□□□ -0.25
LRP1-204ENST00000553277 NOTCH1P46531 2555 aa13.47□□□□□ -0.25
LRP1-204ENST00000553277 RBX1P62877 108 aa13.47□□□□□ -0.25
LRP1-204ENST00000553277 OCIAD2Q56VL3 154 aa13.46□□□□□ -0.26
LRP1-204ENST00000553277 C11orf72Q8NBR9 251 aa13.46□□□□□ -0.26
LRP1-204ENST00000553277 TMEM238LA0A1B0GVL6 79 aa13.45□□□□□ -0.26
LRP1-204ENST00000553277 A6NJY4 79 aa13.45□□□□□ -0.26
LRP1-204ENST00000553277 ZNRF2Q8NHG8 242 aa13.45□□□□□ -0.26
LRP1-204ENST00000553277 SPANXB1Q9NS25 103 aaPredicted RBP13.45□□□□□ -0.26
LRP1-204ENST00000553277 IGLL5B9A064 214 aa13.44□□□□□ -0.26
LRP1-204ENST00000553277 G3V4G9 280 aa13.44□□□□□ -0.26
LRP1-204ENST00000553277 A8MZ25 164 aa13.44□□□□□ -0.26
LRP1-204ENST00000553277 KPRPQ5T749 579 aaPredicted RBP13.44□□□□□ -0.26
LRP1-204ENST00000553277 CFAP126Q5VTH2 177 aa13.44□□□□□ -0.26
LRP1-204ENST00000553277 LINC01587Q99440 93 aa13.44□□□□□ -0.26
LRP1-204ENST00000553277 TNFRSF18Q9Y5U5 241 aa13.44□□□□□ -0.26
LRP1-204ENST00000553277 K7ERJ3 54 aa13.43□□□□□ -0.26
LRP1-204ENST00000553277 K7ERU9 68 aa13.43□□□□□ -0.26
LRP1-204ENST00000553277 RS1O15537 224 aa13.43□□□□□ -0.26
LRP1-204ENST00000553277 SCGB1D4Q6XE38 83 aa13.43□□□□□ -0.26
LRP1-204ENST00000553277 CSNK1G2-AS1Q8NCQ2 148 aa13.43□□□□□ -0.26
LRP1-204ENST00000553277 KIR2DL5BQ8NHK3 375 aa13.43□□□□□ -0.26
LRP1-204ENST00000553277 C1QTNF4Q9BXJ3 329 aa13.43□□□□□ -0.26
LRP1-204ENST00000553277 IGLV4-3A0A075B6K6 122 aa13.42□□□□□ -0.26
LRP1-204ENST00000553277 IGHV3-53P01767 116 aa13.42□□□□□ -0.26
LRP1-204ENST00000553277 AMELXQ99217 191 aa13.42□□□□□ -0.26
LRP1-204ENST00000553277 VCX2Q9H322 139 aa13.42□□□□□ -0.26
LRP1-204ENST00000553277 XCL2Q9UBD3 114 aa13.42□□□□□ -0.26
LRP1-204ENST00000553277 DNAH3Q8TD57 4116 aa13.42□□□□□ -0.26
LRP1-204ENST00000553277 A0A0J9YY99 117 aa13.41□□□□□ -0.26
LRP1-204ENST00000553277 TMEM223A0PJW6 202 aa13.41□□□□□ -0.26
LRP1-204ENST00000553277 LEPROTO15243 131 aa13.41□□□□□ -0.26
LRP1-204ENST00000553277 TMEM170BQ5T4T1 132 aa13.41□□□□□ -0.26
LRP1-204ENST00000553277 NAA38Q9BRA0 125 aaKnown RBP13.41□□□□□ -0.26
LRP1-204ENST00000553277 HTN1P15515 57 aa13.4□□□□□ -0.26
LRP1-204ENST00000553277 RPL35AP18077 110 aaKnown RBP13.4□□□□□ -0.26
LRP1-204ENST00000553277 RRN3P1Q2M238 152 aa13.4□□□□□ -0.26
LRP1-204ENST00000553277 C1orf158Q8N1D5 194 aa13.4□□□□□ -0.26
LRP1-204ENST00000553277 ZNF479Q96JC4 524 aa13.4□□□□□ -0.26
LRP1-204ENST00000553277 SPANXA1Q9NS26 97 aa13.4□□□□□ -0.26
LRP1-204ENST00000553277 J3QQQ9 107 aa13.4□□□□□ -0.26
LRP1-204ENST00000553277 SLC25A29Q8N8R3 303 aa13.4□□□□□ -0.26
LRP1-204ENST00000553277 IGHV4-30-4P0DP06 118 aa13.39□□□□□ -0.27
LRP1-204ENST00000553277 UBE2D1P51668 147 aa13.39□□□□□ -0.27
LRP1-204ENST00000553277 IL17DQ8TAD2 202 aa13.39□□□□□ -0.27
LRP1-204ENST00000553277 PLEKHB2Q96CS7 222 aa13.39□□□□□ -0.27
LRP1-204ENST00000553277 SRSF9Q13242 221 aaKnown RBP eCLIP13.38□□□□□ -0.27
LRP1-204ENST00000553277 ZNF22P17026 224 aaPredicted RBP13.37□□□□□ -0.27
LRP1-204ENST00000553277 LGALS3P17931 250 aaKnown RBP13.37□□□□□ -0.27
LRP1-204ENST00000553277 EMP1P54849 157 aa13.37□□□□□ -0.27
LRP1-204ENST00000553277 MRPS36P82909 103 aaKnown RBP13.37□□□□□ -0.27
LRP1-204ENST00000553277 APOC4P55056 127 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms