RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 SELENOKQ9Y6D0 94 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 SPTA1P02549 2419 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 CACNA1BQ00975 2339 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 DCHS2Q6V1P9 2916 aa4.37□□□□□ -1.71
CHMP4A-210ENST00000552620 TRAV12-2A0A075B6T6 113 aa4.37□□□□□ -1.71
CHMP4A-210ENST00000552620 A0A0B4J2C4 111 aa4.37□□□□□ -1.71
CHMP4A-210ENST00000552620 LOC107984156A0A0G2JMH3 177 aa4.37□□□□□ -1.71
CHMP4A-210ENST00000552620 A8MWV9 139 aa4.37□□□□□ -1.71
CHMP4A-210ENST00000552620 INAFM1C9JVW0 142 aa4.37□□□□□ -1.71
CHMP4A-210ENST00000552620 M0R2P5 195 aa4.37□□□□□ -1.71
CHMP4A-210ENST00000552620 APOMO95445 188 aa4.37□□□□□ -1.71
CHMP4A-210ENST00000552620 TGFAP01135 160 aa4.37□□□□□ -1.71
CHMP4A-210ENST00000552620 AZU1P20160 251 aa4.37□□□□□ -1.71
CHMP4A-210ENST00000552620 SYNJ2BPP57105 145 aa4.37□□□□□ -1.71
CHMP4A-210ENST00000552620 SPINK13Q1W4C9 94 aa4.37□□□□□ -1.71
CHMP4A-210ENST00000552620 SH2D6Q7Z4S9 175 aa4.37□□□□□ -1.71
CHMP4A-210ENST00000552620 ARL17AQ8IVW1 177 aa4.37□□□□□ -1.71
CHMP4A-210ENST00000552620 PPDPFLQ8WWR9 84 aa4.37□□□□□ -1.71
CHMP4A-210ENST00000552620 DNAJC30Q96LL9 226 aa4.37□□□□□ -1.71
CHMP4A-210ENST00000552620 C1QTNF4Q9BXJ3 329 aa4.37□□□□□ -1.71
CHMP4A-210ENST00000552620 VPREB3Q9UKI3 123 aa4.37□□□□□ -1.71
CHMP4A-210ENST00000552620 SPTBN2O15020 2390 aa4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 HIVEP3Q5T1R4 2406 aa4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 COL6A6A6NMZ7 2263 aa4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 IGLV4-3A0A075B6K6 122 aa4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 TMEM262E9PQX1 116 aa4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 IGKV3-20P01619 116 aa4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 SCGB1C2P0DMR2 95 aa4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 ZNF22P17026 224 aaPredicted RBP4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 TSPEAR-AS2P59090 65 aa4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 MRPS36P82909 103 aaKnown RBP4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 GAGE2BQ13066 116 aa4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 GAGE2EQ4V326 116 aa4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 TCTEX1D4Q5JR98 221 aa4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 GAGE2AQ6NT46 116 aa4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 NTN5Q8WTR8 489 aaPredicted RBP4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 LINC01600Q96MT4 127 aa4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 DUX5Q96PT3 197 aa4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 GTSF1LQ9H1H1 148 aa4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 GAGE2DQ9UEU5 116 aa4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 ERG28Q9UKR5 140 aa4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 TNFRSF18Q9Y5U5 241 aa4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 SPTBN1Q01082 2364 aaKnown RBP4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 ASPMQ8IZT6 3477 aa4.36□□□□□ -1.71
CHMP4A-210ENST00000552620 HRNRQ86YZ3 2850 aaPredicted RBP4.35□□□□□ -1.71
CHMP4A-210ENST00000552620 A0A0J9YXV3 536 aa4.35□□□□□ -1.71
CHMP4A-210ENST00000552620 H3BMM0 161 aa4.35□□□□□ -1.71
CHMP4A-210ENST00000552620 IGHV3-33P01772 117 aa4.35□□□□□ -1.71
CHMP4A-210ENST00000552620 IGHV4-30-4P0DP06 118 aa4.35□□□□□ -1.71
CHMP4A-210ENST00000552620 EMP1P54849 157 aa4.35□□□□□ -1.71
CHMP4A-210ENST00000552620 ZNF415Q09FC8 603 aa4.35□□□□□ -1.71
CHMP4A-210ENST00000552620 TEN1Q86WV5 123 aa4.35□□□□□ -1.71
CHMP4A-210ENST00000552620 Q8N2B8 174 aa4.35□□□□□ -1.71
CHMP4A-210ENST00000552620 MTURNQ8N3F0 131 aa4.35□□□□□ -1.71
CHMP4A-210ENST00000552620 TMEM263Q8WUH6 116 aaKnown RBP4.35□□□□□ -1.71
CHMP4A-210ENST00000552620 ZNF702PQ9H963 129 aa4.35□□□□□ -1.71
CHMP4A-210ENST00000552620 YAE1D1Q9NRH1 226 aa4.35□□□□□ -1.71
CHMP4A-210ENST00000552620 SPANXA1Q9NS26 97 aa4.35□□□□□ -1.71
CHMP4A-210ENST00000552620 A0A096LNT2 108 aa4.34□□□□□ -1.71
CHMP4A-210ENST00000552620 IGHV1-58A0A0C4DH39 117 aa4.34□□□□□ -1.71
CHMP4A-210ENST00000552620 A0A0J9YXY3 114 aa4.34□□□□□ -1.71
CHMP4A-210ENST00000552620 TRBV30A0A0K0K1B3 111 aa4.34□□□□□ -1.71
CHMP4A-210ENST00000552620 TINCRA0A1B0GVN0 87 aa4.34□□□□□ -1.71
CHMP4A-210ENST00000552620 TIMM17BO60830 172 aa4.34□□□□□ -1.71
CHMP4A-210ENST00000552620 TCL1BO95988 128 aa4.34□□□□□ -1.71
CHMP4A-210ENST00000552620 CD28P10747 220 aa4.34□□□□□ -1.71
CHMP4A-210ENST00000552620 DEFB131AP59861 70 aa4.34□□□□□ -1.71
CHMP4A-210ENST00000552620 C10orf99Q6UWK7 81 aa4.34□□□□□ -1.71
CHMP4A-210ENST00000552620 MUSTN1Q8IVN3 82 aa4.34□□□□□ -1.71
CHMP4A-210ENST00000552620 PRR26Q8N8Z3 221 aa4.34□□□□□ -1.71
CHMP4A-210ENST00000552620 DUX3Q96PT4 197 aa4.34□□□□□ -1.71
CHMP4A-210ENST00000552620 OPRPNQ99935 248 aaPredicted RBP4.34□□□□□ -1.71
CHMP4A-210ENST00000552620 TIMM21Q9BVV7 248 aa4.34□□□□□ -1.71
CHMP4A-210ENST00000552620 SPANXDQ9BXN6 97 aa4.34□□□□□ -1.71
CHMP4A-210ENST00000552620 SPANXCQ9NY87 97 aa4.34□□□□□ -1.71
CHMP4A-210ENST00000552620 NBASA2RRP1 2371 aa4.33□□□□□ -1.72
CHMP4A-210ENST00000552620 TRAV25A0A0B4J276 109 aa4.33□□□□□ -1.72
CHMP4A-210ENST00000552620 A0A1B0GV72 72 aa4.33□□□□□ -1.72
CHMP4A-210ENST00000552620 KNCNA6PVL3 124 aa4.33□□□□□ -1.72
CHMP4A-210ENST00000552620 RS1O15537 224 aa4.33□□□□□ -1.72
CHMP4A-210ENST00000552620 IGHV3-53P01767 116 aa4.33□□□□□ -1.72
CHMP4A-210ENST00000552620 PRSS2P07478 247 aa4.33□□□□□ -1.72
CHMP4A-210ENST00000552620 IGHV3-30-3P0DP02 117 aa4.33□□□□□ -1.72
CHMP4A-210ENST00000552620 IFITM1P13164 125 aa4.33□□□□□ -1.72
CHMP4A-210ENST00000552620 INSL3P51460 131 aa4.33□□□□□ -1.72
CHMP4A-210ENST00000552620 SMAGPQ0VAQ4 97 aa4.33□□□□□ -1.72
CHMP4A-210ENST00000552620 ATXN8Q156A1 80 aa4.33□□□□□ -1.72
CHMP4A-210ENST00000552620 TEX29Q8N6K0 151 aa4.33□□□□□ -1.72
CHMP4A-210ENST00000552620 ZNF418Q8TF45 676 aaPredicted RBP4.33□□□□□ -1.72
CHMP4A-210ENST00000552620 LAMA5O15230 3695 aa4.33□□□□□ -1.72
CHMP4A-210ENST00000552620 ABCA2Q9BZC7 2435 aa4.33□□□□□ -1.72
CHMP4A-210ENST00000552620 DNAJC9-AS1A6NH13 148 aa4.32□□□□□ -1.72
CHMP4A-210ENST00000552620 SLC25A20O43772 301 aa4.32□□□□□ -1.72
CHMP4A-210ENST00000552620 INSP01308 110 aa4.32□□□□□ -1.72
CHMP4A-210ENST00000552620 RBMY1A1P0DJD3 496 aaKnown RBP4.32□□□□□ -1.72
CHMP4A-210ENST00000552620 RBMY1CP0DJD4 496 aa4.32□□□□□ -1.72
CHMP4A-210ENST00000552620 CMC4P56277 68 aaPredicted RBP4.32□□□□□ -1.72
CHMP4A-210ENST00000552620 RBMY1FQ15415 496 aaKnown RBP4.32□□□□□ -1.72
CHMP4A-210ENST00000552620 LRRC75A-AS1Q8N1F1 130 aa4.32□□□□□ -1.72
CHMP4A-210ENST00000552620 TMEM86BQ8N661 226 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms