RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 C19orf71A6NCJ1 209 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 F8WDY8 70 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 H3BP45 60 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 CTDSP2O14595 271 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 NUPR1O60356 82 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 CIB2O75838 187 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 RAB3DO95716 219 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 PYYP10082 97 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 ANXA3P12429 323 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 CSN1S1P47710 185 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 ZNF80P51504 273 aaPredicted RBP1.2□□□□□ -2.22
PTCH1-223ENST00000551623 TAS2R19P59542 299 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 RAB4BP61018 213 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 GNGT1P63211 74 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 RPL18AQ02543 176 aaKnown RBP1.2□□□□□ -2.22
PTCH1-223ENST00000551623 MXD1Q05195 221 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 TMEM128Q5BJH2 165 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 KRTAP13-1Q8IUC0 172 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.2□□□□□ -2.22
PTCH1-223ENST00000551623 CHCHD10Q8WYQ3 142 aaPredicted RBP1.2□□□□□ -2.22
PTCH1-223ENST00000551623 C2orf48Q96LS8 159 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 GPN1Q9HCN4 374 aaPredicted RBP1.2□□□□□ -2.22
PTCH1-223ENST00000551623 TREM1Q9NP99 234 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 CCDC59Q9P031 241 aaKnown RBP1.2□□□□□ -2.22
PTCH1-223ENST00000551623 RABL2AQ9UBK7 228 aaPredicted RBP1.2□□□□□ -2.22
PTCH1-223ENST00000551623 NAGKQ9UJ70 344 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 PSG8Q9UQ74 426 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 IGLV4-69A0A075B6H9 119 aa1.19□□□□□ -2.22
PTCH1-223ENST00000551623 IGLV8-61A0A075B6I0 122 aa1.19□□□□□ -2.22
PTCH1-223ENST00000551623 F6UZH7 168 aa1.19□□□□□ -2.22
PTCH1-223ENST00000551623 MT1FP04733 61 aa1.19□□□□□ -2.22
PTCH1-223ENST00000551623 BCL2P10415 239 aa1.19□□□□□ -2.22
PTCH1-223ENST00000551623 RPL28P46779 137 aaKnown RBP1.19□□□□□ -2.22
PTCH1-223ENST00000551623 MRPS10P82664 201 aaKnown RBP1.19□□□□□ -2.22
PTCH1-223ENST00000551623 LGALSLQ3ZCW2 172 aaPredicted RBP1.19□□□□□ -2.22
PTCH1-223ENST00000551623 FAM74A4Q5TZK3 123 aa1.19□□□□□ -2.22
PTCH1-223ENST00000551623 MIC13Q5XKP0 118 aa1.19□□□□□ -2.22
PTCH1-223ENST00000551623 EIF5AL1Q6IS14 154 aaKnown RBP1.19□□□□□ -2.22
PTCH1-223ENST00000551623 NRARPQ7Z6K4 114 aa1.19□□□□□ -2.22
PTCH1-223ENST00000551623 PRNTQ86SH4 94 aa1.19□□□□□ -2.22
PTCH1-223ENST00000551623 DAND5Q8N907 189 aa1.19□□□□□ -2.22
PTCH1-223ENST00000551623 C15orf40Q8WUR7 153 aa1.19□□□□□ -2.22
PTCH1-223ENST00000551623 SMIM4Q8WVI0 70 aa1.19□□□□□ -2.22
PTCH1-223ENST00000551623 ISOC2Q96AB3 205 aa1.19□□□□□ -2.22
PTCH1-223ENST00000551623 PRRT1Q99946 306 aa1.19□□□□□ -2.22
PTCH1-223ENST00000551623 DERL1Q9BUN8 251 aa1.19□□□□□ -2.22
PTCH1-223ENST00000551623 OTORQ9NRC9 128 aa1.19□□□□□ -2.22
PTCH1-223ENST00000551623 ANAPC11Q9NYG5 84 aa1.19□□□□□ -2.22
PTCH1-223ENST00000551623 PSENENQ9NZ42 101 aa1.19□□□□□ -2.22
PTCH1-223ENST00000551623 MRPL35Q9NZE8 188 aaKnown RBP1.19□□□□□ -2.22
PTCH1-223ENST00000551623 EXTL2Q9UBQ6 330 aa1.19□□□□□ -2.22
PTCH1-223ENST00000551623 SYNE2Q8WXH0 6885 aaKnown RBP1.19□□□□□ -2.22
PTCH1-223ENST00000551623 SMIM31A0A1B0GVY4 71 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 FAM168BA1KXE4 195 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 C7orf66A4D0T2 115 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 KRBOX1C9JBD0 128 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 G3V3Q6 166 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 M0QXV9 152 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 BCE1O60756 84 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 SPINK1P00995 79 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 GCGP01275 180 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 CXCL1P09341 107 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 ARMS2P0C7Q2 107 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 METTL15P1P0C7V9 234 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 VPREB1P12018 145 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 ZNF25P17030 456 aaPredicted RBP1.18□□□□□ -2.22
PTCH1-223ENST00000551623 FGF7P21781 194 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 SULT1A2P50226 295 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 GABARAPL2P60520 117 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 RRAS2P62070 204 aaPredicted RBP1.18□□□□□ -2.22
PTCH1-223ENST00000551623 RANP62826 216 aaKnown RBP1.18□□□□□ -2.22
PTCH1-223ENST00000551623 SCGB2B2Q4G0G5 96 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 PCOTHQ58A44 107 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 SAPCD1Q5SSQ6 148 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 CD164L2Q6UWJ8 174 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 SNX29P2Q8IUI4 249 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 ZFP82Q8N141 532 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 FAM19A2Q8N3H0 131 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 OR5A1Q8NGJ0 315 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 AP3S1Q92572 193 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 SCGB3A2Q96PL1 93 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 IMMP2LQ96T52 175 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 NDFIP1Q9BT67 221 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 TMEM243Q9BU79 118 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 KRTAP2-1Q9BYU5 128 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 UQCC1Q9NVA1 299 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 BLOC1S6Q9UL45 172 aa1.18□□□□□ -2.22
PTCH1-223ENST00000551623 PAIP2BQ9ULR5 123 aaKnown RBP1.18□□□□□ -2.22
PTCH1-223ENST00000551623 NEBP20929 6669 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 IGKV2D-26A0A0A0MRZ7 120 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 LINC00959A0A1B0GUT2 108 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 ANKRD20A5PA0PJZ0 165 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 FABP5P3A8MUU1 101 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 DISC1C4P0D8 188 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 H3BVH4 76 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 M0QY20 66 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 CCL25O15444 150 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 SSSCA1O60232 199 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 TCRAP04437 139 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 OR5AL1P0C617 328 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms