RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 RBX1P62877 108 aa7.37□□□□□ -1.23
PTCH1-222ENST00000551425 CENPWQ5EE01 88 aa7.37□□□□□ -1.23
PTCH1-222ENST00000551425 UQCC3Q6UW78 93 aa7.37□□□□□ -1.23
PTCH1-222ENST00000551425 STPG4Q8N801 248 aa7.37□□□□□ -1.23
PTCH1-222ENST00000551425 SFRP2Q96HF1 295 aa7.37□□□□□ -1.23
PTCH1-222ENST00000551425 MLST8Q9BVC4 326 aa7.37□□□□□ -1.23
PTCH1-222ENST00000551425 BIN3Q9NQY0 253 aa7.37□□□□□ -1.23
PTCH1-222ENST00000551425 ZNF727A8MUV8 499 aa7.36□□□□□ -1.23
PTCH1-222ENST00000551425 C9JQL5 133 aa7.36□□□□□ -1.23
PTCH1-222ENST00000551425 Q6ZRP5 223 aa7.36□□□□□ -1.23
PTCH1-222ENST00000551425 COMMD7Q86VX2 200 aa7.36□□□□□ -1.23
PTCH1-222ENST00000551425 SMIM7Q9BQ49 75 aa7.36□□□□□ -1.23
PTCH1-222ENST00000551425 IGLV10-54A0A075B6I4 117 aa7.35□□□□□ -1.23
PTCH1-222ENST00000551425 TRAV8-4A0A0B4J246 113 aa7.35□□□□□ -1.23
PTCH1-222ENST00000551425 H3BVH4 76 aa7.35□□□□□ -1.23
PTCH1-222ENST00000551425 P01737 135 aa7.35□□□□□ -1.23
PTCH1-222ENST00000551425 GZMBP10144 247 aa7.35□□□□□ -1.23
PTCH1-222ENST00000551425 CRIP1P50238 77 aa7.35□□□□□ -1.23
PTCH1-222ENST00000551425 DNLZQ5SXM8 178 aa7.35□□□□□ -1.23
PTCH1-222ENST00000551425 FAM162BQ5T6X4 162 aa7.35□□□□□ -1.23
PTCH1-222ENST00000551425 PRSS3P2Q8NHM4 247 aa7.35□□□□□ -1.23
PTCH1-222ENST00000551425 TRBV20OR9-2A0A075B6H5 130 aa7.34□□□□□ -1.23
PTCH1-222ENST00000551425 IGKV2-24A0A0C4DH68 120 aa7.34□□□□□ -1.23
PTCH1-222ENST00000551425 SH2D1AO60880 128 aa7.34□□□□□ -1.23
PTCH1-222ENST00000551425 ARMS2P0C7Q2 107 aa7.34□□□□□ -1.23
PTCH1-222ENST00000551425 REG3AQ06141 175 aa7.34□□□□□ -1.23
PTCH1-222ENST00000551425 TMEM241Q24JQ0 296 aa7.34□□□□□ -1.23
PTCH1-222ENST00000551425 PRR27Q6MZM9 219 aa7.34□□□□□ -1.23
PTCH1-222ENST00000551425 NTM-AS1Q6ZSK4 140 aa7.34□□□□□ -1.23
PTCH1-222ENST00000551425 ZNF664Q8N3J9 261 aa7.34□□□□□ -1.23
PTCH1-222ENST00000551425 OCC1Q8TAD7 63 aa7.34□□□□□ -1.23
PTCH1-222ENST00000551425 PSORS1C2Q9UIG4 136 aa7.34□□□□□ -1.23
PTCH1-222ENST00000551425 RPS10P46783 165 aaKnown RBP7.33□□□□□ -1.24
PTCH1-222ENST00000551425 TMEM97Q5BJF2 176 aa7.33□□□□□ -1.24
PTCH1-222ENST00000551425 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.33□□□□□ -1.24
PTCH1-222ENST00000551425 NEXN-AS1Q8NBZ9 246 aa7.33□□□□□ -1.24
PTCH1-222ENST00000551425 NAT8Q9UHE5 227 aa7.33□□□□□ -1.24
PTCH1-222ENST00000551425 TMEM218A2RU14 115 aa7.32□□□□□ -1.24
PTCH1-222ENST00000551425 B4DEV8 164 aa7.32□□□□□ -1.24
PTCH1-222ENST00000551425 GAGE6Q13070 117 aa7.32□□□□□ -1.24
PTCH1-222ENST00000551425 A0A096LNI7 61 aa7.31□□□□□ -1.24
PTCH1-222ENST00000551425 TRAV26-2A0A0B4J265 109 aa7.31□□□□□ -1.24
PTCH1-222ENST00000551425 C19orf71A6NCJ1 209 aa7.31□□□□□ -1.24
PTCH1-222ENST00000551425 KRBOX1C9JBD0 128 aa7.31□□□□□ -1.24
PTCH1-222ENST00000551425 K7EN84 100 aa7.31□□□□□ -1.24
PTCH1-222ENST00000551425 RAB4BP61018 213 aa7.31□□□□□ -1.24
PTCH1-222ENST00000551425 LINC01559Q495D7 138 aa7.31□□□□□ -1.24
PTCH1-222ENST00000551425 LINC01551Q86U37 167 aa7.31□□□□□ -1.24
PTCH1-222ENST00000551425 C15orf56Q8N910 161 aa7.31□□□□□ -1.24
PTCH1-222ENST00000551425 LINC00474Q9P2X8 69 aa7.31□□□□□ -1.24
PTCH1-222ENST00000551425 PHLDA3Q9Y5J5 127 aa7.31□□□□□ -1.24
PTCH1-222ENST00000551425 F8W036 122 aa7.3□□□□□ -1.24
PTCH1-222ENST00000551425 M0R036 132 aa7.3□□□□□ -1.24
PTCH1-222ENST00000551425 M0R381 172 aa7.3□□□□□ -1.24
PTCH1-222ENST00000551425 RPS20P60866 119 aaKnown RBP7.3□□□□□ -1.24
PTCH1-222ENST00000551425 RPL23P62829 140 aaKnown RBP7.3□□□□□ -1.24
PTCH1-222ENST00000551425 NDUFA5Q16718 116 aa7.3□□□□□ -1.24
PTCH1-222ENST00000551425 FAM231DQ6ZW35 169 aa7.3□□□□□ -1.24
PTCH1-222ENST00000551425 ZFP82Q8N141 532 aa7.3□□□□□ -1.24
PTCH1-222ENST00000551425 C20orf203Q8NBC4 194 aa7.3□□□□□ -1.24
PTCH1-222ENST00000551425 NUDT10Q8NFP7 164 aa7.3□□□□□ -1.24
PTCH1-222ENST00000551425 NUDT11Q96G61 164 aa7.3□□□□□ -1.24
PTCH1-222ENST00000551425 TRBV25-1A0A075B6N4 114 aa7.29□□□□□ -1.24
PTCH1-222ENST00000551425 XKRY2A2RUG3 117 aa7.29□□□□□ -1.24
PTCH1-222ENST00000551425 GATCO43716 136 aaKnown RBP7.29□□□□□ -1.24
PTCH1-222ENST00000551425 CXCL1P09341 107 aa7.29□□□□□ -1.24
PTCH1-222ENST00000551425 CACNG7P62955 275 aa7.29□□□□□ -1.24
PTCH1-222ENST00000551425 PNRC1Q12796 327 aaPredicted RBP7.29□□□□□ -1.24
PTCH1-222ENST00000551425 ADIRFQ15847 76 aa7.29□□□□□ -1.24
PTCH1-222ENST00000551425 PRR4Q16378 134 aa7.29□□□□□ -1.24
PTCH1-222ENST00000551425 IQCJQ1A5X6 159 aa7.29□□□□□ -1.24
PTCH1-222ENST00000551425 CFAP161Q6P656 301 aa7.29□□□□□ -1.24
PTCH1-222ENST00000551425 OR2D3Q8NGH3 330 aa7.29□□□□□ -1.24
PTCH1-222ENST00000551425 SEC11CQ9BY50 192 aa7.29□□□□□ -1.24
PTCH1-222ENST00000551425 RNASE7Q9H1E1 156 aaKnown RBP7.29□□□□□ -1.24
PTCH1-222ENST00000551425 TMSB15BA0A087X1C1 80 aa7.28□□□□□ -1.24
PTCH1-222ENST00000551425 GRIFINA4D1Z8 144 aa7.28□□□□□ -1.24
PTCH1-222ENST00000551425 PRR26Q8N8Z3 221 aa7.28□□□□□ -1.24
PTCH1-222ENST00000551425 ISOC2Q96AB3 205 aa7.28□□□□□ -1.24
PTCH1-222ENST00000551425 RPP21Q9H633 154 aaKnown RBP7.28□□□□□ -1.24
PTCH1-222ENST00000551425 OSTCQ9NRP0 149 aa7.28□□□□□ -1.24
PTCH1-222ENST00000551425 A0A1B0GUV1 79 aa7.27□□□□□ -1.25
PTCH1-222ENST00000551425 ZNF56Q15929 161 aa7.27□□□□□ -1.25
PTCH1-222ENST00000551425 GFRA4Q9GZZ7 299 aa7.27□□□□□ -1.25
PTCH1-222ENST00000551425 IGLV4-60A0A075B6I1 120 aa7.26□□□□□ -1.25
PTCH1-222ENST00000551425 IGHV1-24A0A0C4DH33 117 aa7.26□□□□□ -1.25
PTCH1-222ENST00000551425 A8MWL6 223 aa7.26□□□□□ -1.25
PTCH1-222ENST00000551425 ADCYAP1P18509 176 aa7.26□□□□□ -1.25
PTCH1-222ENST00000551425 HIGD2BQ4VC39 106 aa7.26□□□□□ -1.25
PTCH1-222ENST00000551425 CT83Q5H943 113 aa7.26□□□□□ -1.25
PTCH1-222ENST00000551425 SLC7A5P1Q8MH63 180 aa7.26□□□□□ -1.25
PTCH1-222ENST00000551425 CRCT1Q9UGL9 99 aa7.26□□□□□ -1.25
PTCH1-222ENST00000551425 PKIGQ9Y2B9 76 aa7.26□□□□□ -1.25
PTCH1-222ENST00000551425 GVQW2A0A096LPI5 108 aaPredicted RBP7.25□□□□□ -1.25
PTCH1-222ENST00000551425 PPP1R2P9O14990 202 aa7.25□□□□□ -1.25
PTCH1-222ENST00000551425 C10orf91Q5T1B1 145 aa7.25□□□□□ -1.25
PTCH1-222ENST00000551425 LCE2DQ5TA82 110 aaPredicted RBP7.25□□□□□ -1.25
PTCH1-222ENST00000551425 ANAPC16Q96DE5 110 aa7.25□□□□□ -1.25
PTCH1-222ENST00000551425 SSBP4Q9BWG4 385 aaPredicted RBP7.25□□□□□ -1.25
PTCH1-222ENST00000551425 CARHSP1Q9Y2V2 147 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms