RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 IGKV2D-26A0A0A0MRZ7 120 aa11.17□□□□□ -0.62
SCN8A-206ENST00000550891 ZNRF2Q8NHG8 242 aa11.17□□□□□ -0.62
SCN8A-206ENST00000550891 IGHV3-38A0A0C4DH36 116 aa11.17□□□□□ -0.62
SCN8A-206ENST00000550891 SIVA1O15304 175 aa11.17□□□□□ -0.62
SCN8A-206ENST00000550891 CSNK1G2-AS1Q8NCQ2 148 aa11.17□□□□□ -0.62
SCN8A-206ENST00000550891 ZMAT5Q9UDW3 170 aaKnown RBP11.17□□□□□ -0.62
SCN8A-206ENST00000550891 C2orf91Q6ZV80 131 aa11.16□□□□□ -0.62
SCN8A-206ENST00000550891 K7EQD1 137 aa11.15□□□□□ -0.62
SCN8A-206ENST00000550891 TRBV7-3A0A075B6L6 115 aa11.15□□□□□ -0.62
SCN8A-206ENST00000550891 TRBV10-1A0A0K0K1A3 114 aa11.15□□□□□ -0.62
SCN8A-206ENST00000550891 TMEM170BQ5T4T1 132 aa11.15□□□□□ -0.62
SCN8A-206ENST00000550891 Q9UF83 564 aa11.15□□□□□ -0.62
SCN8A-206ENST00000550891 TRGV4A0A0C4DH28 118 aa11.15□□□□□ -0.63
SCN8A-206ENST00000550891 BVES-AS1Q5T3Y7 98 aa11.15□□□□□ -0.63
SCN8A-206ENST00000550891 LURAP1LQ8IV03 231 aa11.14□□□□□ -0.63
SCN8A-206ENST00000550891 TTTY13Q9BZ97 58 aa11.14□□□□□ -0.63
SCN8A-206ENST00000550891 NACAE9PAV3 2078 aa11.14□□□□□ -0.63
SCN8A-206ENST00000550891 ZNF25P17030 456 aaPredicted RBP11.14□□□□□ -0.63
SCN8A-206ENST00000550891 HSD52Q0P140 79 aa11.14□□□□□ -0.63
SCN8A-206ENST00000550891 DGAT2L7PQ6IED9 249 aa11.14□□□□□ -0.63
SCN8A-206ENST00000550891 SPATA3Q8NHX4 192 aa11.14□□□□□ -0.63
SCN8A-206ENST00000550891 OPRPNQ99935 248 aaPredicted RBP11.14□□□□□ -0.63
SCN8A-206ENST00000550891 CIDEAO60543 219 aa11.13□□□□□ -0.63
SCN8A-206ENST00000550891 C11orf86A6NJI1 115 aa11.13□□□□□ -0.63
SCN8A-206ENST00000550891 APOC4P55056 127 aa11.13□□□□□ -0.63
SCN8A-206ENST00000550891 OVOL2Q9BRP0 275 aa11.12□□□□□ -0.63
SCN8A-206ENST00000550891 SLC25A29Q8N8R3 303 aa11.12□□□□□ -0.63
SCN8A-206ENST00000550891 PYGO1Q9Y3Y4 419 aa11.12□□□□□ -0.63
SCN8A-206ENST00000550891 IGLV4-3A0A075B6K6 122 aa11.11□□□□□ -0.63
SCN8A-206ENST00000550891 GAGE12JA6NER3 117 aa11.11□□□□□ -0.63
SCN8A-206ENST00000550891 GAGE1Q13065 139 aa11.11□□□□□ -0.63
SCN8A-206ENST00000550891 GAGE4Q13068 117 aa11.11□□□□□ -0.63
SCN8A-206ENST00000550891 GAGE5Q13069 117 aa11.11□□□□□ -0.63
SCN8A-206ENST00000550891 GAGE13Q4V321 117 aa11.11□□□□□ -0.63
SCN8A-206ENST00000550891 PRADC1Q9BSG0 188 aa11.11□□□□□ -0.63
SCN8A-206ENST00000550891 CHAC1Q9BUX1 264 aa11.11□□□□□ -0.63
SCN8A-206ENST00000550891 SPANXA1Q9NS26 97 aa11.11□□□□□ -0.63
SCN8A-206ENST00000550891 TEP1Q99973 2627 aaKnown RBP11.11□□□□□ -0.63
SCN8A-206ENST00000550891 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.11□□□□□ -0.63
SCN8A-206ENST00000550891 PLAC8L1A1L4L8 177 aa11.11□□□□□ -0.63
SCN8A-206ENST00000550891 IGKV2-29A2NJV5 120 aaPredicted RBP11.11□□□□□ -0.63
SCN8A-206ENST00000550891 E9PLD3 99 aa11.11□□□□□ -0.63
SCN8A-206ENST00000550891 TRBV25-1A0A075B6N4 114 aa11.11□□□□□ -0.63
SCN8A-206ENST00000550891 DEFB130BP0DP73 79 aa11.11□□□□□ -0.63
SCN8A-206ENST00000550891 DEFB130AP0DP74 79 aa11.11□□□□□ -0.63
SCN8A-206ENST00000550891 DAZ4Q86SG3 579 aaKnown RBP11.11□□□□□ -0.63
SCN8A-206ENST00000550891 DAZ3Q9NR90 486 aaKnown RBP11.11□□□□□ -0.63
SCN8A-206ENST00000550891 IGLV4-69A0A075B6H9 119 aa11.1□□□□□ -0.63
SCN8A-206ENST00000550891 SEC11AP67812 179 aa11.1□□□□□ -0.63
SCN8A-206ENST00000550891 C3orf56Q8N813 242 aa11.1□□□□□ -0.63
SCN8A-206ENST00000550891 A6NDN8 102 aa11.1□□□□□ -0.63
SCN8A-206ENST00000550891 SMIM9A6NGZ8 99 aa11.1□□□□□ -0.63
SCN8A-206ENST00000550891 ORAOV1Q8WV07 137 aa11.1□□□□□ -0.63
SCN8A-206ENST00000550891 HIGD1BQ9P298 99 aa11.1□□□□□ -0.63
SCN8A-206ENST00000550891 WFDC9Q8NEX5 89 aa11.09□□□□□ -0.63
SCN8A-206ENST00000550891 CHCHD7Q9BUK0 85 aa11.09□□□□□ -0.63
SCN8A-206ENST00000550891 CEMP1Q6PRD7 247 aaPredicted RBP11.09□□□□□ -0.63
SCN8A-206ENST00000550891 SCGB1D4Q6XE38 83 aa11.09□□□□□ -0.63
SCN8A-206ENST00000550891 KIR2DL5BQ8NHK3 375 aa11.09□□□□□ -0.63
SCN8A-206ENST00000550891 MYMXA0A1B0GTQ4 84 aa11.08□□□□□ -0.64
SCN8A-206ENST00000550891 GCSHP23434 173 aa11.08□□□□□ -0.64
SCN8A-206ENST00000550891 SMAGPQ0VAQ4 97 aa11.08□□□□□ -0.64
SCN8A-206ENST00000550891 ZNF815PA8K554 130 aa11.08□□□□□ -0.64
SCN8A-206ENST00000550891 CRYBA4P53673 196 aa11.08□□□□□ -0.64
SCN8A-206ENST00000550891 DEFB135Q30KP9 77 aa11.08□□□□□ -0.64
SCN8A-206ENST00000550891 TRBV6-4A0A1B0GX49 114 aa11.08□□□□□ -0.64
SCN8A-206ENST00000550891 NPSP0C0P6 89 aa11.08□□□□□ -0.64
SCN8A-206ENST00000550891 PTTG1IPP53801 180 aa11.08□□□□□ -0.64
SCN8A-206ENST00000550891 MAPKAPK5-AS1Q8N8E1 139 aa11.07□□□□□ -0.64
SCN8A-206ENST00000550891 UBE2D4Q9Y2X8 147 aa11.07□□□□□ -0.64
SCN8A-206ENST00000550891 RNASE13Q5GAN3 156 aaKnown RBP11.07□□□□□ -0.64
SCN8A-206ENST00000550891 A0A0J9YXV3 536 aa11.06□□□□□ -0.64
SCN8A-206ENST00000550891 UBE2L6O14933 153 aa11.06□□□□□ -0.64
SCN8A-206ENST00000550891 NFE4Q86UQ8 179 aa11.06□□□□□ -0.64
SCN8A-206ENST00000550891 HIST1H4GQ99525 98 aa11.06□□□□□ -0.64
SCN8A-206ENST00000550891 TENM1Q9UKZ4 2725 aa11.06□□□□□ -0.64
SCN8A-206ENST00000550891 LGALS3P17931 250 aaKnown RBP11.06□□□□□ -0.64
SCN8A-206ENST00000550891 UBE2D3P61077 147 aa11.06□□□□□ -0.64
SCN8A-206ENST00000550891 UBE2D2P62837 147 aa11.06□□□□□ -0.64
SCN8A-206ENST00000550891 KRTAP24-1Q3LI83 254 aa11.06□□□□□ -0.64
SCN8A-206ENST00000550891 AMMECR1LQ6DCA0 310 aa11.05□□□□□ -0.64
SCN8A-206ENST00000550891 COX11Q9Y6N1 276 aa11.05□□□□□ -0.64
SCN8A-206ENST00000550891 GEMIN7Q9H840 131 aaKnown RBP11.04□□□□□ -0.64
SCN8A-206ENST00000550891 AMELXQ99217 191 aa11.04□□□□□ -0.64
SCN8A-206ENST00000550891 X6R8D5 127 aa11.04□□□□□ -0.64
SCN8A-206ENST00000550891 Q6ZUT4 128 aa11.04□□□□□ -0.64
SCN8A-206ENST00000550891 VWFP04275 2813 aa11.03□□□□□ -0.64
SCN8A-206ENST00000550891 TMEM243Q9BU79 118 aa11.03□□□□□ -0.64
SCN8A-206ENST00000550891 VAMP3Q15836 100 aa11.03□□□□□ -0.64
SCN8A-206ENST00000550891 Q6ZVH6 145 aa11.03□□□□□ -0.64
SCN8A-206ENST00000550891 FHL2Q14192 279 aa11.02□□□□□ -0.65
SCN8A-206ENST00000550891 TMEM101Q96IK0 257 aa11.02□□□□□ -0.65
SCN8A-206ENST00000550891 TIMM21Q9BVV7 248 aa11.02□□□□□ -0.65
SCN8A-206ENST00000550891 IGHV3-64A0A075B6Q5 118 aa11.02□□□□□ -0.65
SCN8A-206ENST00000550891 LOC100131303A0A0U1RQF7 123 aa11.02□□□□□ -0.65
SCN8A-206ENST00000550891 J3QQQ9 107 aa11.02□□□□□ -0.65
SCN8A-206ENST00000550891 ZNF22P17026 224 aaPredicted RBP11.02□□□□□ -0.65
SCN8A-206ENST00000550891 SRSF9Q13242 221 aaKnown RBP eCLIP11.02□□□□□ -0.65
SCN8A-206ENST00000550891 TAL2Q16559 108 aa11.02□□□□□ -0.65
SCN8A-206ENST00000550891 FAM222AQ5U5X8 452 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms