RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 LEPROTO15243 131 aa3.18□□□□□ -1.9
CCDC59-204ENST00000550589 IGHV3-53P01767 116 aa3.18□□□□□ -1.9
CCDC59-204ENST00000550589 CD28P10747 220 aa3.18□□□□□ -1.9
CCDC59-204ENST00000550589 RPL39P62891 51 aaKnown RBP3.18□□□□□ -1.9
CCDC59-204ENST00000550589 RPL36AP83881 106 aaKnown RBP3.18□□□□□ -1.9
CCDC59-204ENST00000550589 FHL3Q13643 280 aa3.18□□□□□ -1.9
CCDC59-204ENST00000550589 BEAN1Q3B7T3 259 aa3.18□□□□□ -1.9
CCDC59-204ENST00000550589 UFSP1Q6NVU6 142 aa3.18□□□□□ -1.9
CCDC59-204ENST00000550589 NEGR1Q7Z3B1 354 aa3.18□□□□□ -1.9
CCDC59-204ENST00000550589 MAPKAPK5-AS1Q8N8E1 139 aa3.18□□□□□ -1.9
CCDC59-204ENST00000550589 RPL36ALQ969Q0 106 aaKnown RBP3.18□□□□□ -1.9
CCDC59-204ENST00000550589 CREBBPQ92793 2442 aa3.18□□□□□ -1.9
CCDC59-204ENST00000550589 ASH1LQ9NR48 2969 aaKnown RBP3.18□□□□□ -1.9
CCDC59-204ENST00000550589 VPS13CQ709C8 3753 aa3.18□□□□□ -1.9
CCDC59-204ENST00000550589 TRBV7-3A0A075B6L6 115 aa3.17□□□□□ -1.9
CCDC59-204ENST00000550589 A0A1B0GWB2 263 aa3.17□□□□□ -1.9
CCDC59-204ENST00000550589 IGLL5B9A064 214 aa3.17□□□□□ -1.9
CCDC59-204ENST00000550589 TSHBP01222 138 aa3.17□□□□□ -1.9
CCDC59-204ENST00000550589 DAZ2Q13117 558 aaKnown RBP3.17□□□□□ -1.9
CCDC59-204ENST00000550589 CIRBPQ14011 172 aaKnown RBP3.17□□□□□ -1.9
CCDC59-204ENST00000550589 CFAP126Q5VTH2 177 aa3.17□□□□□ -1.9
CCDC59-204ENST00000550589 DAZ4Q86SG3 579 aaKnown RBP3.17□□□□□ -1.9
CCDC59-204ENST00000550589 SLC25A29Q8N8R3 303 aa3.17□□□□□ -1.9
CCDC59-204ENST00000550589 WFDC11Q8NEX6 87 aa3.17□□□□□ -1.9
CCDC59-204ENST00000550589 TMEM263Q8WUH6 116 aaKnown RBP3.17□□□□□ -1.9
CCDC59-204ENST00000550589 TTTY13Q9BZ97 58 aa3.17□□□□□ -1.9
CCDC59-204ENST00000550589 GEMIN7Q9H840 131 aaKnown RBP3.17□□□□□ -1.9
CCDC59-204ENST00000550589 DAZ3Q9NR90 486 aaKnown RBP3.17□□□□□ -1.9
CCDC59-204ENST00000550589 YAE1D1Q9NRH1 226 aa3.17□□□□□ -1.9
CCDC59-204ENST00000550589 USP9XQ93008 2570 aaPredicted RBP3.17□□□□□ -1.9
CCDC59-204ENST00000550589 ZNF462Q96JM2 2506 aa3.17□□□□□ -1.9
CCDC59-204ENST00000550589 PRRC2AP48634 2157 aaKnown RBP3.17□□□□□ -1.9
CCDC59-204ENST00000550589 TINCRA0A1B0GVN0 87 aa3.17□□□□□ -1.9
CCDC59-204ENST00000550589 RS1O15537 224 aa3.17□□□□□ -1.9
CCDC59-204ENST00000550589 SAP30O75446 220 aa3.17□□□□□ -1.9
CCDC59-204ENST00000550589 AZU1P20160 251 aa3.17□□□□□ -1.9
CCDC59-204ENST00000550589 MRPS36P82909 103 aaKnown RBP3.17□□□□□ -1.9
CCDC59-204ENST00000550589 RRN3P1Q2M238 152 aa3.17□□□□□ -1.9
CCDC59-204ENST00000550589 MORN3Q6PF18 240 aaPredicted RBP3.17□□□□□ -1.9
CCDC59-204ENST00000550589 C16orf74Q96GX8 76 aa3.17□□□□□ -1.9
CCDC59-204ENST00000550589 TIMM21Q9BVV7 248 aa3.17□□□□□ -1.9
CCDC59-204ENST00000550589 IGSF10Q6WRI0 2623 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 USP9YO00507 2555 aaPredicted RBP3.16□□□□□ -1.9
CCDC59-204ENST00000550589 IGLV4-3A0A075B6K6 122 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 IGHV3OR16-12A0A075B7B8 117 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 IGHV3-73A0A0B4J1V6 119 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 A0A0J9YY99 117 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 TMEM223A0PJW6 202 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 SCGB1C2P0DMR2 95 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 P0DMU3 169 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 FAM231AP0DMU4 169 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 FAM231CP0DMU5 169 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 HERVK_113P63121 156 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 C18orf65Q6ZTR6 163 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 ZNRF2Q8NHG8 242 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 LINC01006Q8NI28 216 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 PHLDA1Q8WV24 401 aaPredicted RBP3.16□□□□□ -1.9
CCDC59-204ENST00000550589 AMELXQ99217 191 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 XCL2Q9UBD3 114 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 CSDC2Q9Y534 153 aaKnown RBP3.16□□□□□ -1.9
CCDC59-204ENST00000550589 ZFHX3Q15911 3703 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 ANKRD17O75179 2603 aaKnown RBP3.16□□□□□ -1.9
CCDC59-204ENST00000550589 TRGV1A0A0A0MS02 117 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 TRAV4A0A0B4J268 109 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 IGHV1-58A0A0C4DH39 117 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 H7C423 109 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 UBE2L6O14933 153 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 NDUFA7O95182 113 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 COX6CP09669 75 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 RBMY1A1P0DJD3 496 aaKnown RBP3.16□□□□□ -1.9
CCDC59-204ENST00000550589 RBMY1CP0DJD4 496 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 EMP1P54849 157 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 HILS1P60008 231 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 RBMY1FQ15415 496 aaKnown RBP3.16□□□□□ -1.9
CCDC59-204ENST00000550589 C11orf72Q8NBR9 251 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 RNASE8Q8TDE3 154 aaKnown RBP3.16□□□□□ -1.9
CCDC59-204ENST00000550589 TMEM101Q96IK0 257 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 CITED2Q99967 270 aaPredicted RBP3.16□□□□□ -1.9
CCDC59-204ENST00000550589 PRO1854Q9UHT4 67 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 CFAP46Q8IYW2 2715 aa3.16□□□□□ -1.9
CCDC59-204ENST00000550589 TRGV2A0A075B6R0 118 aa3.15□□□□□ -1.91
CCDC59-204ENST00000550589 LOC107984156A0A0G2JMH3 177 aa3.15□□□□□ -1.91
CCDC59-204ENST00000550589 K7EQD1 137 aa3.15□□□□□ -1.91
CCDC59-204ENST00000550589 K7ERJ3 54 aa3.15□□□□□ -1.91
CCDC59-204ENST00000550589 APOMO95445 188 aa3.15□□□□□ -1.91
CCDC59-204ENST00000550589 GYPEP15421 78 aa3.15□□□□□ -1.91
CCDC59-204ENST00000550589 ZNF22P17026 224 aaPredicted RBP3.15□□□□□ -1.91
CCDC59-204ENST00000550589 INSL3P51460 131 aa3.15□□□□□ -1.91
CCDC59-204ENST00000550589 UBE2D1P51668 147 aa3.15□□□□□ -1.91
CCDC59-204ENST00000550589 TIRAPP58753 221 aa3.15□□□□□ -1.91
CCDC59-204ENST00000550589 RBX1P62877 108 aa3.15□□□□□ -1.91
CCDC59-204ENST00000550589 ODF3L2Q3SX64 289 aa3.15□□□□□ -1.91
CCDC59-204ENST00000550589 NDUFA11Q86Y39 141 aa3.15□□□□□ -1.91
CCDC59-204ENST00000550589 ARL17AQ8IVW1 177 aa3.15□□□□□ -1.91
CCDC59-204ENST00000550589 C10orf126Q8N4M7 172 aa3.15□□□□□ -1.91
CCDC59-204ENST00000550589 UBE2D4Q9Y2X8 147 aa3.15□□□□□ -1.91
CCDC59-204ENST00000550589 LRRK2Q5S007 2527 aa3.15□□□□□ -1.91
CCDC59-204ENST00000550589 A0A0B4J2C4 111 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 A0A0J9YXV3 536 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 TRBV6-4A0A1B0GX49 114 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms