RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 A0A1B0GVG6 124 aa10.24□□□□□ -0.77
COX6A1-203ENST00000550009 PLA2G1BP04054 148 aaKnown RBP10.24□□□□□ -0.77
COX6A1-203ENST00000550009 TRGC1P0CF51 173 aa10.24□□□□□ -0.77
COX6A1-203ENST00000550009 HNRNPA3P51991 378 aaKnown RBP10.24□□□□□ -0.77
COX6A1-203ENST00000550009 CEBPGP53567 150 aa10.24□□□□□ -0.77
COX6A1-203ENST00000550009 TMEM97Q5BJF2 176 aa10.24□□□□□ -0.77
COX6A1-203ENST00000550009 AKAP14Q86UN6 197 aa10.24□□□□□ -0.77
COX6A1-203ENST00000550009 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.24□□□□□ -0.77
COX6A1-203ENST00000550009 CNFNQ9BYD5 112 aa10.24□□□□□ -0.77
COX6A1-203ENST00000550009 XKRY2A2RUG3 117 aa10.23□□□□□ -0.77
COX6A1-203ENST00000550009 H7C1H1 209 aa10.23□□□□□ -0.77
COX6A1-203ENST00000550009 PGLYRP4Q96LB8 373 aa10.23□□□□□ -0.77
COX6A1-203ENST00000550009 IGKV3OR2-268A0A0C4DH90 116 aa10.22□□□□□ -0.77
COX6A1-203ENST00000550009 C14orf177Q52M58 125 aa10.22□□□□□ -0.77
COX6A1-203ENST00000550009 LYPD6BQ8NI32 183 aa10.22□□□□□ -0.77
COX6A1-203ENST00000550009 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.21□□□□□ -0.77
COX6A1-203ENST00000550009 IGKV2-29A2NJV5 120 aaPredicted RBP10.21□□□□□ -0.77
COX6A1-203ENST00000550009 AMTP48728 403 aa10.21□□□□□ -0.77
COX6A1-203ENST00000550009 PKIAP61925 76 aa10.21□□□□□ -0.77
COX6A1-203ENST00000550009 WDR73Q6P4I2 378 aa10.21□□□□□ -0.77
COX6A1-203ENST00000550009 C9orf163Q8N9P6 203 aa10.21□□□□□ -0.77
COX6A1-203ENST00000550009 BIN3Q9NQY0 253 aa10.21□□□□□ -0.77
COX6A1-203ENST00000550009 A0A1B0GUV1 79 aa10.2□□□□□ -0.78
COX6A1-203ENST00000550009 J3QL48 77 aa10.2□□□□□ -0.78
COX6A1-203ENST00000550009 GATCO43716 136 aaKnown RBP10.2□□□□□ -0.78
COX6A1-203ENST00000550009 CHTF8P0CG12 524 aa10.2□□□□□ -0.78
COX6A1-203ENST00000550009 SDIM1Q6ZPB5 146 aa10.2□□□□□ -0.78
COX6A1-203ENST00000550009 COTL1Q14019 142 aa10.19□□□□□ -0.78
COX6A1-203ENST00000550009 hDV102S1A0JD36 115 aa10.18□□□□□ -0.78
COX6A1-203ENST00000550009 KRTAP29-1A8MX34 341 aaPredicted RBP10.18□□□□□ -0.78
COX6A1-203ENST00000550009 BLOC1S1P78537 153 aa10.18□□□□□ -0.78
COX6A1-203ENST00000550009 C15orf56Q8N910 161 aa10.18□□□□□ -0.78
COX6A1-203ENST00000550009 HMCN2Q8NDA2 5059 aa10.17□□□□□ -0.78
COX6A1-203ENST00000550009 FAM231BA6NCW3 169 aa10.17□□□□□ -0.78
COX6A1-203ENST00000550009 GAGE12HA6NDE8 117 aa10.17□□□□□ -0.78
COX6A1-203ENST00000550009 TMEM250H0YL14 139 aa10.17□□□□□ -0.78
COX6A1-203ENST00000550009 UBE2L6O14933 153 aa10.17□□□□□ -0.78
COX6A1-203ENST00000550009 TAGLN2P37802 199 aaKnown RBP10.17□□□□□ -0.78
COX6A1-203ENST00000550009 DGAT2L7PQ6IED9 249 aa10.17□□□□□ -0.78
COX6A1-203ENST00000550009 SRP19P09132 144 aaKnown RBP10.16□□□□□ -0.78
COX6A1-203ENST00000550009 RPS10P46783 165 aaKnown RBP10.16□□□□□ -0.78
COX6A1-203ENST00000550009 FAM231DQ6ZW35 169 aa10.16□□□□□ -0.78
COX6A1-203ENST00000550009 RNF185Q96GF1 192 aa10.16□□□□□ -0.78
COX6A1-203ENST00000550009 SDHAF1A6NFY7 115 aa10.15□□□□□ -0.78
COX6A1-203ENST00000550009 C9JQL5 133 aa10.15□□□□□ -0.78
COX6A1-203ENST00000550009 HIGD2BQ4VC39 106 aa10.15□□□□□ -0.78
COX6A1-203ENST00000550009 LINC01551Q86U37 167 aa10.15□□□□□ -0.78
COX6A1-203ENST00000550009 SMIM7Q9BQ49 75 aa10.15□□□□□ -0.78
COX6A1-203ENST00000550009 EIF5A2Q9GZV4 153 aaKnown RBP10.15□□□□□ -0.78
COX6A1-203ENST00000550009 TRAV8-4A0A0B4J246 113 aa10.14□□□□□ -0.79
COX6A1-203ENST00000550009 A8MWL6 223 aa10.14□□□□□ -0.79
COX6A1-203ENST00000550009 SMKR1H3BMG3 65 aa10.14□□□□□ -0.79
COX6A1-203ENST00000550009 RPL37AP61513 92 aaKnown RBP10.14□□□□□ -0.79
COX6A1-203ENST00000550009 CNBPP62633 177 aaKnown RBP10.14□□□□□ -0.79
COX6A1-203ENST00000550009 HIGD1CA8MV81 97 aa10.13□□□□□ -0.79
COX6A1-203ENST00000550009 TSHBP01222 138 aa10.13□□□□□ -0.79
COX6A1-203ENST00000550009 FGF6P10767 208 aa10.13□□□□□ -0.79
COX6A1-203ENST00000550009 RNASEKQ6P5S7 137 aaKnown RBP10.13□□□□□ -0.79
COX6A1-203ENST00000550009 FAM210AQ96ND0 272 aa10.13□□□□□ -0.79
COX6A1-203ENST00000550009 TMEM242Q9NWH2 141 aa10.13□□□□□ -0.79
COX6A1-203ENST00000550009 NCR2O95944 276 aa10.12□□□□□ -0.79
COX6A1-203ENST00000550009 APCSP02743 223 aa10.12□□□□□ -0.79
COX6A1-203ENST00000550009 SRSF3P84103 164 aaKnown RBP10.12□□□□□ -0.79
COX6A1-203ENST00000550009 AMN1Q8IY45 258 aa10.12□□□□□ -0.79
COX6A1-203ENST00000550009 CLRN3Q8NCR9 226 aa10.12□□□□□ -0.79
COX6A1-203ENST00000550009 CHCHD10Q8WYQ3 142 aaPredicted RBP10.12□□□□□ -0.79
COX6A1-203ENST00000550009 LINC00526Q96FQ7 95 aa10.12□□□□□ -0.79
COX6A1-203ENST00000550009 TNXBP22105 4242 aa10.12□□□□□ -0.79
COX6A1-203ENST00000550009 ZNF727A8MUV8 499 aa10.11□□□□□ -0.79
COX6A1-203ENST00000550009 RAB4AP20338 218 aa10.11□□□□□ -0.79
COX6A1-203ENST00000550009 CIRBPQ14011 172 aaKnown RBP10.11□□□□□ -0.79
COX6A1-203ENST00000550009 V9GYV3 84 aa10.11□□□□□ -0.79
COX6A1-203ENST00000550009 PMCHP20382 165 aa10.1□□□□□ -0.79
COX6A1-203ENST00000550009 FOXI1Q12951 378 aa10.1□□□□□ -0.79
COX6A1-203ENST00000550009 CT83Q5H943 113 aa10.1□□□□□ -0.79
COX6A1-203ENST00000550009 AMMECR1LQ6DCA0 310 aa10.1□□□□□ -0.79
COX6A1-203ENST00000550009 SMIM15Q7Z3B0 74 aa10.1□□□□□ -0.79
COX6A1-203ENST00000550009 TSKUQ8WUA8 353 aa10.1□□□□□ -0.79
COX6A1-203ENST00000550009 IGHV3-64A0A075B6Q5 118 aa10.09□□□□□ -0.79
COX6A1-203ENST00000550009 A0A087WYN8 130 aa10.09□□□□□ -0.79
COX6A1-203ENST00000550009 TRBV6-5A0A0K0K1A5 114 aa10.09□□□□□ -0.79
COX6A1-203ENST00000550009 A0A1B0GUT8 65 aa10.09□□□□□ -0.79
COX6A1-203ENST00000550009 ESDP10768 282 aa10.09□□□□□ -0.79
COX6A1-203ENST00000550009 NUP35Q8NFH5 326 aa10.09□□□□□ -0.79
COX6A1-203ENST00000550009 PRSS3P2Q8NHM4 247 aa10.09□□□□□ -0.79
COX6A1-203ENST00000550009 I3L3M4 83 aa10.08□□□□□ -0.8
COX6A1-203ENST00000550009 POLR2KP53803 58 aaKnown RBP10.08□□□□□ -0.8
COX6A1-203ENST00000550009 COX6A2Q02221 97 aa10.08□□□□□ -0.8
COX6A1-203ENST00000550009 SPACA4Q8TDM5 124 aa10.08□□□□□ -0.8
COX6A1-203ENST00000550009 ISOC2Q96AB3 205 aa10.08□□□□□ -0.8
COX6A1-203ENST00000550009 TMEM191AQ9H0A3 160 aa10.08□□□□□ -0.8
COX6A1-203ENST00000550009 OSTCQ9NRP0 149 aa10.08□□□□□ -0.8
COX6A1-203ENST00000550009 XCL1P47992 114 aa10.07□□□□□ -0.8
COX6A1-203ENST00000550009 RPL23P62829 140 aaKnown RBP10.07□□□□□ -0.8
COX6A1-203ENST00000550009 RNASE13Q5GAN3 156 aaKnown RBP10.07□□□□□ -0.8
COX6A1-203ENST00000550009 ST20Q9HBF5 79 aa10.07□□□□□ -0.8
COX6A1-203ENST00000550009 AP5S1Q9NUS5 200 aa10.07□□□□□ -0.8
COX6A1-203ENST00000550009 LINC00959A0A1B0GUT2 108 aa10.06□□□□□ -0.8
COX6A1-203ENST00000550009 CCL25O15444 150 aa10.06□□□□□ -0.8
COX6A1-203ENST00000550009 NRACQ8N912 160 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms