RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 LINC00526Q96FQ7 95 aa5.77□□□□□ -1.49
C2CD3-220ENST00000544293 CDIP1Q9H305 208 aa5.77□□□□□ -1.49
C2CD3-220ENST00000544293 SSNA1O43805 119 aa5.76□□□□□ -1.49
C2CD3-220ENST00000544293 UPK1BO75841 260 aa5.76□□□□□ -1.49
C2CD3-220ENST00000544293 NKX2-5P52952 324 aaPredicted RBP5.76□□□□□ -1.49
C2CD3-220ENST00000544293 FOXI1Q12951 378 aa5.76□□□□□ -1.49
C2CD3-220ENST00000544293 PRR26Q8N8Z3 221 aa5.76□□□□□ -1.49
C2CD3-220ENST00000544293 TMEM243Q9BU79 118 aa5.76□□□□□ -1.49
C2CD3-220ENST00000544293 NKX6-2Q9C056 277 aaPredicted RBP5.76□□□□□ -1.49
C2CD3-220ENST00000544293 UBE2G1P62253 170 aa5.75□□□□□ -1.49
C2CD3-220ENST00000544293 SRSF3P84103 164 aaKnown RBP5.75□□□□□ -1.49
C2CD3-220ENST00000544293 SPANXN1Q5VSR9 72 aa5.75□□□□□ -1.49
C2CD3-220ENST00000544293 CFAP161Q6P656 301 aa5.75□□□□□ -1.49
C2CD3-220ENST00000544293 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.75□□□□□ -1.49
C2CD3-220ENST00000544293 CHCHD10Q8WYQ3 142 aaPredicted RBP5.75□□□□□ -1.49
C2CD3-220ENST00000544293 PGLYRP4Q96LB8 373 aa5.75□□□□□ -1.49
C2CD3-220ENST00000544293 IGLC6P0CF74 106 aa5.74□□□□□ -1.49
C2CD3-220ENST00000544293 FHITP49789 147 aa5.74□□□□□ -1.49
C2CD3-220ENST00000544293 C21orf62-AS1Q17RA5 79 aa5.74□□□□□ -1.49
C2CD3-220ENST00000544293 LINC00299Q6ZSB3 139 aa5.74□□□□□ -1.49
C2CD3-220ENST00000544293 PSORS1C2Q9UIG4 136 aa5.74□□□□□ -1.49
C2CD3-220ENST00000544293 IGKV3OR2-268A0A0C4DH90 116 aa5.73□□□□□ -1.49
C2CD3-220ENST00000544293 FAM231BA6NCW3 169 aa5.73□□□□□ -1.49
C2CD3-220ENST00000544293 SULT1A2P50226 295 aa5.73□□□□□ -1.49
C2CD3-220ENST00000544293 KRTAP11-1Q8IUC1 163 aa5.73□□□□□ -1.49
C2CD3-220ENST00000544293 PAGE4O60829 102 aa5.72□□□□□ -1.49
C2CD3-220ENST00000544293 KRTAP1-4P0C5Y4 121 aa5.72□□□□□ -1.49
C2CD3-220ENST00000544293 AKR1C3P42330 323 aa5.72□□□□□ -1.49
C2CD3-220ENST00000544293 PTTG1IPP53801 180 aa5.72□□□□□ -1.49
C2CD3-220ENST00000544293 RASL11AQ6T310 242 aa5.72□□□□□ -1.49
C2CD3-220ENST00000544293 BAGE2Q86Y30 109 aa5.72□□□□□ -1.49
C2CD3-220ENST00000544293 NIT2Q9NQR4 276 aa5.72□□□□□ -1.49
C2CD3-220ENST00000544293 CYTL1Q9NRR1 136 aa5.72□□□□□ -1.49
C2CD3-220ENST00000544293 LINC00474Q9P2X8 69 aa5.72□□□□□ -1.49
C2CD3-220ENST00000544293 MAP1LC3B2A6NCE7 125 aa5.71□□□□□ -1.5
C2CD3-220ENST00000544293 MGPP08493 103 aa5.71□□□□□ -1.5
C2CD3-220ENST00000544293 SMIM17P0DL12 118 aa5.71□□□□□ -1.5
C2CD3-220ENST00000544293 LCE1DQ5T752 114 aa5.71□□□□□ -1.5
C2CD3-220ENST00000544293 CST9LP1Q5W188 147 aa5.71□□□□□ -1.5
C2CD3-220ENST00000544293 Q6ZNX1 250 aa5.71□□□□□ -1.5
C2CD3-220ENST00000544293 ZNF664Q8N3J9 261 aa5.71□□□□□ -1.5
C2CD3-220ENST00000544293 AP1S3Q96PC3 154 aa5.71□□□□□ -1.5
C2CD3-220ENST00000544293 TCEAL7Q9BRU2 100 aa5.71□□□□□ -1.5
C2CD3-220ENST00000544293 MAP1LC3BQ9GZQ8 125 aa5.71□□□□□ -1.5
C2CD3-220ENST00000544293 NTF3P20783 257 aa5.7□□□□□ -1.5
C2CD3-220ENST00000544293 AMTP48728 403 aa5.7□□□□□ -1.5
C2CD3-220ENST00000544293 S100ZQ8WXG8 99 aa5.7□□□□□ -1.5
C2CD3-220ENST00000544293 MED28Q9H204 178 aa5.7□□□□□ -1.5
C2CD3-220ENST00000544293 ALG5Q9Y673 324 aa5.7□□□□□ -1.5
C2CD3-220ENST00000544293 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.69□□□□□ -1.5
C2CD3-220ENST00000544293 IGKV2-29A2NJV5 120 aaPredicted RBP5.69□□□□□ -1.5
C2CD3-220ENST00000544293 G3V3Q6 166 aa5.69□□□□□ -1.5
C2CD3-220ENST00000544293 GAGE2BQ13066 116 aa5.69□□□□□ -1.5
C2CD3-220ENST00000544293 COTL1Q14019 142 aa5.69□□□□□ -1.5
C2CD3-220ENST00000544293 TMUB2Q71RG4 321 aa5.69□□□□□ -1.5
C2CD3-220ENST00000544293 PHF5AQ7RTV0 110 aaKnown RBP5.69□□□□□ -1.5
C2CD3-220ENST00000544293 GATD1Q8NB37 220 aa5.69□□□□□ -1.5
C2CD3-220ENST00000544293 CARD19Q96LW7 228 aa5.69□□□□□ -1.5
C2CD3-220ENST00000544293 MUC17Q685J3 4493 aa5.69□□□□□ -1.5
C2CD3-220ENST00000544293 LINC00959A0A1B0GUT2 108 aa5.68□□□□□ -1.5
C2CD3-220ENST00000544293 C19orf71A6NCJ1 209 aa5.68□□□□□ -1.5
C2CD3-220ENST00000544293 ZNF561-AS1K7EIQ3 104 aa5.68□□□□□ -1.5
C2CD3-220ENST00000544293 UBE2L6O14933 153 aa5.68□□□□□ -1.5
C2CD3-220ENST00000544293 S100A9P06702 114 aaKnown RBP5.68□□□□□ -1.5
C2CD3-220ENST00000544293 FGF6P10767 208 aa5.68□□□□□ -1.5
C2CD3-220ENST00000544293 XCL1P47992 114 aa5.68□□□□□ -1.5
C2CD3-220ENST00000544293 SYCNQ0VAF6 134 aa5.68□□□□□ -1.5
C2CD3-220ENST00000544293 C9orf116Q5BN46 136 aaPredicted RBP5.68□□□□□ -1.5
C2CD3-220ENST00000544293 C1orf137Q5JT78 98 aa5.68□□□□□ -1.5
C2CD3-220ENST00000544293 AKR1C8PQ5T2L2 129 aa5.68□□□□□ -1.5
C2CD3-220ENST00000544293 FER1L6-AS1Q8NA97 138 aa5.68□□□□□ -1.5
C2CD3-220ENST00000544293 STOML3Q8TAV4 291 aa5.68□□□□□ -1.5
C2CD3-220ENST00000544293 MBD3L1Q8WWY6 194 aa5.68□□□□□ -1.5
C2CD3-220ENST00000544293 NDUFA13Q9P0J0 144 aa5.68□□□□□ -1.5
C2CD3-220ENST00000544293 TRAV26-2A0A0B4J265 109 aa5.67□□□□□ -1.5
C2CD3-220ENST00000544293 IGHV1-58A0A0C4DH39 117 aa5.67□□□□□ -1.5
C2CD3-220ENST00000544293 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.67□□□□□ -1.5
C2CD3-220ENST00000544293 CCL25O15444 150 aa5.67□□□□□ -1.5
C2CD3-220ENST00000544293 IGLV7-43P04211 117 aa5.67□□□□□ -1.5
C2CD3-220ENST00000544293 BCL2P10415 239 aa5.67□□□□□ -1.5
C2CD3-220ENST00000544293 FOXA3P55318 350 aaPredicted RBP5.67□□□□□ -1.5
C2CD3-220ENST00000544293 MEF2BQ02080 365 aaPredicted RBP5.67□□□□□ -1.5
C2CD3-220ENST00000544293 PRR4Q16378 134 aa5.67□□□□□ -1.5
C2CD3-220ENST00000544293 LYZL1Q6UWQ5 148 aa5.67□□□□□ -1.5
C2CD3-220ENST00000544293 KRTAP7-1Q8IUC3 87 aa5.67□□□□□ -1.5
C2CD3-220ENST00000544293 NUP35Q8NFH5 326 aa5.67□□□□□ -1.5
C2CD3-220ENST00000544293 OR5A1Q8NGJ0 315 aa5.67□□□□□ -1.5
C2CD3-220ENST00000544293 TPPP3Q9BW30 176 aa5.67□□□□□ -1.5
C2CD3-220ENST00000544293 IGLV4-69A0A075B6H9 119 aa5.66□□□□□ -1.5
C2CD3-220ENST00000544293 BORCS7-ASMTA0A0B4J1R7 106 aa5.66□□□□□ -1.5
C2CD3-220ENST00000544293 MT-ND6P03923 174 aa5.66□□□□□ -1.5
C2CD3-220ENST00000544293 RPL35P42766 123 aaKnown RBP5.66□□□□□ -1.5
C2CD3-220ENST00000544293 DEFA1P59665 94 aa5.66□□□□□ -1.5
C2CD3-220ENST00000544293 CACNG7P62955 275 aa5.66□□□□□ -1.5
C2CD3-220ENST00000544293 OR2D3Q8NGH3 330 aa5.66□□□□□ -1.5
C2CD3-220ENST00000544293 RPL39LQ96EH5 51 aaKnown RBP5.66□□□□□ -1.5
C2CD3-220ENST00000544293 LOC107984640A0A0U1RRK4 108 aa5.65□□□□□ -1.5
C2CD3-220ENST00000544293 H0Y9J4 135 aa5.65□□□□□ -1.5
C2CD3-220ENST00000544293 H7C423 109 aa5.65□□□□□ -1.5
C2CD3-220ENST00000544293 ESDP10768 282 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms