RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 TIMM17AQ99595 171 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 HOPXQ9BPY8 73 aaPredicted RBP0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 BCL7BQ9BQE9 202 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 SLIRPQ9GZT3 109 aaKnown RBP0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 ARV1Q9H2C2 271 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 CACFD1Q9UGQ2 172 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 TIMM9Q9Y5J7 89 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 IGHV3OR16-9A0A0B4J2B5 98 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 A0A0G2JND7 137 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 H0YAA0 97 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 NME4O00746 187 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 GYG2O15488 501 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 LINC00869P0C866 280 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 RNASE3P12724 160 aaKnown RBP0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 MT1GP13640 62 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 NKX2-5P52952 324 aaPredicted RBP0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 NDUFV3P56181 108 aaKnown RBP0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 DEFA1P59665 94 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 UBE2G2P60604 165 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 RAB4BP61018 213 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 SELENOTP62341 195 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 MT1XP80297 61 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 MAPRE2Q15555 327 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 AARDQ4LEZ3 155 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 UNQ6190/PRO20217Q6UXQ8 127 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 LINC00305Q7Z4B0 112 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 SMIM19Q96E16 107 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 CCDC90BQ9GZT6 254 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 ARL6Q9H0F7 186 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 C11orf1Q9H5F2 150 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 C6orf48Q9UBA6 75 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 RABL2AQ9UBK7 228 aaPredicted RBP0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 RAB22AQ9UL26 194 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 RABL2BQ9UNT1 228 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 ALG5Q9Y673 324 aa0.79□□□□□ -2.28
TRAV1-1-201ENST00000542354 TRBV19A0A075B6N1 114 aa0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 A0A1W2PNM2 257 aa0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 RAB19A4D1S5 217 aa0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 SNTNA6NMZ2 147 aa0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 H3BMQ9 156 aa0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 MAPK3P27361 379 aaPredicted RBP0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 RPS11P62280 158 aaKnown RBP eCLIP0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 RAB11AP62491 216 aa0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 RPL32P62910 135 aaKnown RBP0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 C2orf76Q3KRA6 126 aa0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 CDNFQ49AH0 187 aa0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 LINC00483Q53H64 154 aa0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 C1orf195Q5TG92 126 aa0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 C12orf73Q69YU5 71 aa0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 RNASEKQ6P5S7 137 aaKnown RBP0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 PATE2Q6UY27 113 aa0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 CYP2G1PQ6ZSU1 146 aa0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 PACRGLQ8N7B6 248 aa0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 DNAJC9Q8WXX5 260 aa0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 SFRP2Q96HF1 295 aa0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 PLGRKTQ9HBL7 147 aa0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 RHBDL2Q9NX52 303 aa0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 EXTL2Q9UBQ6 330 aa0.78□□□□□ -2.28
TRAV1-1-201ENST00000542354 TRBV30A0A0K0K1B3 111 aa0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 ZNF727A8MUV8 499 aa0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 C1orf196B1AJZ1 125 aa0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 GNGT2O14610 69 aa0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 AKR1C1Q04828 323 aa0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 PDE6HQ13956 83 aa0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 ZNF56Q15929 161 aa0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 PHLDA2Q53GA4 152 aa0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 C9orf153Q5TBE3 101 aa0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 XAF1Q6GPH4 301 aa0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 HRCT1Q6UXD1 115 aa0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 PRNTQ86SH4 94 aa0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 C12orf45Q8N5I9 185 aaPredicted RBP0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 SPC24Q8NBT2 197 aa0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 FAM3DQ96BQ1 224 aa0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 TMEM101Q96IK0 257 aa0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 ALKBH7Q9BT30 221 aaPredicted RBP0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 TMEM126AQ9H061 195 aa0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 XAGE1AQ9HD64 81 aa0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 LGALS13Q9UHV8 139 aa0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 ARL2-SNX15V9GYD0 113 aa0.77□□□□□ -2.29
TRAV1-1-201ENST00000542354 CIB2O75838 187 aa0.76□□□□□ -2.29
TRAV1-1-201ENST00000542354 UPK1BO75841 260 aa0.76□□□□□ -2.29
TRAV1-1-201ENST00000542354 HSMCR30P0CW71 290 aa0.76□□□□□ -2.29
TRAV1-1-201ENST00000542354 GNG2P59768 71 aa0.76□□□□□ -2.29
TRAV1-1-201ENST00000542354 GNG11P61952 73 aa0.76□□□□□ -2.29
TRAV1-1-201ENST00000542354 MXD1Q05195 221 aa0.76□□□□□ -2.29
TRAV1-1-201ENST00000542354 C10orf113Q5VZT2 155 aa0.76□□□□□ -2.29
TRAV1-1-201ENST00000542354 SOSTDC1Q6X4U4 206 aa0.76□□□□□ -2.29
TRAV1-1-201ENST00000542354 C5orf38Q86SI9 138 aa0.76□□□□□ -2.29
TRAV1-1-201ENST00000542354 LINC00469Q8N7U9 141 aa0.76□□□□□ -2.29
TRAV1-1-201ENST00000542354 NKAPP1Q8N9T2 125 aa0.76□□□□□ -2.29
TRAV1-1-201ENST00000542354 TERB2Q8NHR7 220 aa0.76□□□□□ -2.29
TRAV1-1-201ENST00000542354 ORAOV1Q8WV07 137 aa0.76□□□□□ -2.29
TRAV1-1-201ENST00000542354 DUSP21Q9H596 190 aa0.76□□□□□ -2.29
TRAV1-1-201ENST00000542354 PAIP2BQ9ULR5 123 aaKnown RBP0.76□□□□□ -2.29
TRAV1-1-201ENST00000542354 GPR132Q9UNW8 380 aa0.76□□□□□ -2.29
TRAV1-1-201ENST00000542354 TMEM238C9JI98 176 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 F6UZH7 168 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 K7EQM0 130 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 M0R381 172 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms