RNA–Protein interactions for RNA: ENST00000542338.1

NPIPB4-216, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 387 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-216ENST00000542338 FAM231AP0DMU4 169 aa6.58□□□□□ -1.36
NPIPB4-216ENST00000542338 FAM231CP0DMU5 169 aa6.58□□□□□ -1.36
NPIPB4-216ENST00000542338 ESDP10768 282 aa6.58□□□□□ -1.36
NPIPB4-216ENST00000542338 SMAGPQ0VAQ4 97 aa6.58□□□□□ -1.36
NPIPB4-216ENST00000542338 COTL1Q14019 142 aa6.58□□□□□ -1.36
NPIPB4-216ENST00000542338 IQCJQ1A5X6 159 aa6.58□□□□□ -1.36
NPIPB4-216ENST00000542338 CASC10Q5T4H9 136 aa6.58□□□□□ -1.36
NPIPB4-216ENST00000542338 RNASEKQ6P5S7 137 aaKnown RBP6.58□□□□□ -1.36
NPIPB4-216ENST00000542338 NEGR1Q7Z3B1 354 aa6.58□□□□□ -1.36
NPIPB4-216ENST00000542338 TMEM18Q96B42 140 aa6.58□□□□□ -1.36
NPIPB4-216ENST00000542338 GTSF1LQ9H1H1 148 aa6.58□□□□□ -1.36
NPIPB4-216ENST00000542338 STAB2Q8WWQ8 2551 aa6.58□□□□□ -1.36
NPIPB4-216ENST00000542338 IGLV2-18A0A075B6J9 118 aa6.57□□□□□ -1.36
NPIPB4-216ENST00000542338 A0A0J9YY99 117 aa6.57□□□□□ -1.36
NPIPB4-216ENST00000542338 SERF1AO75920 110 aa6.57□□□□□ -1.36
NPIPB4-216ENST00000542338 PHLDA1Q8WV24 401 aaPredicted RBP6.57□□□□□ -1.36
NPIPB4-216ENST00000542338 TMA7Q9Y2S6 64 aaKnown RBP6.57□□□□□ -1.36
NPIPB4-216ENST00000542338 HUWE1Q7Z6Z7 4374 aaKnown RBP6.56□□□□□ -1.36
NPIPB4-216ENST00000542338 NUPR2A6NF83 97 aa6.56□□□□□ -1.36
NPIPB4-216ENST00000542338 C5orf52A6NGY3 159 aa6.56□□□□□ -1.36
NPIPB4-216ENST00000542338 NUDT3O95989 172 aa6.56□□□□□ -1.36
NPIPB4-216ENST00000542338 LINC00694P0DN24 101 aa6.56□□□□□ -1.36
NPIPB4-216ENST00000542338 S100A2P29034 98 aa6.56□□□□□ -1.36
NPIPB4-216ENST00000542338 TCTAP57738 103 aa6.56□□□□□ -1.36
NPIPB4-216ENST00000542338 TIRAPP58753 221 aa6.56□□□□□ -1.36
NPIPB4-216ENST00000542338 PACRGQ96M98 296 aaPredicted RBP6.56□□□□□ -1.36
NPIPB4-216ENST00000542338 KLK5Q9Y337 293 aaPredicted RBP6.56□□□□□ -1.36
NPIPB4-216ENST00000542338 TRBV25-1A0A075B6N4 114 aa6.55□□□□□ -1.36
NPIPB4-216ENST00000542338 A0A096LPF7 62 aa6.55□□□□□ -1.36
NPIPB4-216ENST00000542338 LOC100131303A0A0U1RQF7 123 aa6.55□□□□□ -1.36
NPIPB4-216ENST00000542338 H7C423 109 aa6.55□□□□□ -1.36
NPIPB4-216ENST00000542338 TSHBP01222 138 aa6.55□□□□□ -1.36
NPIPB4-216ENST00000542338 HBDP02042 147 aa6.55□□□□□ -1.36
NPIPB4-216ENST00000542338 PKIAP61925 76 aa6.55□□□□□ -1.36
NPIPB4-216ENST00000542338 SNRPEP62304 92 aaKnown RBP6.55□□□□□ -1.36
NPIPB4-216ENST00000542338 CEMP1Q6PRD7 247 aaPredicted RBP6.55□□□□□ -1.36
NPIPB4-216ENST00000542338 Q9UF83 564 aa6.55□□□□□ -1.36
NPIPB4-216ENST00000542338 DNAH7Q8WXX0 4024 aa6.54□□□□□ -1.36
NPIPB4-216ENST00000542338 IGHV1-24A0A0C4DH33 117 aa6.54□□□□□ -1.36
NPIPB4-216ENST00000542338 AMTP48728 403 aa6.54□□□□□ -1.36
NPIPB4-216ENST00000542338 URB1-AS1Q96HZ7 61 aa6.54□□□□□ -1.36
NPIPB4-216ENST00000542338 CYSLTR1Q9Y271 337 aa6.54□□□□□ -1.36
NPIPB4-216ENST00000542338 NACAE9PAV3 2078 aa6.54□□□□□ -1.36
NPIPB4-216ENST00000542338 TRBV6-8A0A0A6YYG3 113 aa6.53□□□□□ -1.36
NPIPB4-216ENST00000542338 IGHV3-38A0A0C4DH36 116 aa6.53□□□□□ -1.36
NPIPB4-216ENST00000542338 IGLL5B9A064 214 aa6.53□□□□□ -1.36
NPIPB4-216ENST00000542338 ATP5LO75964 103 aa6.53□□□□□ -1.36
NPIPB4-216ENST00000542338 LEPROTL1O95214 131 aa6.53□□□□□ -1.36
NPIPB4-216ENST00000542338 BTF3P20290 206 aaKnown RBP6.53□□□□□ -1.36
NPIPB4-216ENST00000542338 PAPPA-AS1Q5QFB9 102 aa6.53□□□□□ -1.36
NPIPB4-216ENST00000542338 ZFAND6Q6FIF0 208 aa6.53□□□□□ -1.36
NPIPB4-216ENST00000542338 C20orf203Q8NBC4 194 aa6.53□□□□□ -1.36
NPIPB4-216ENST00000542338 TMEM243Q9BU79 118 aa6.53□□□□□ -1.36
NPIPB4-216ENST00000542338 HSPB8Q9UJY1 196 aa6.53□□□□□ -1.36
NPIPB4-216ENST00000542338 TRAV8-6A0A0B4J262 113 aa6.52□□□□□ -1.37
NPIPB4-216ENST00000542338 LCE6AA0A183 80 aa6.52□□□□□ -1.37
NPIPB4-216ENST00000542338 UBE2L6O14933 153 aa6.52□□□□□ -1.37
NPIPB4-216ENST00000542338 NUPR1O60356 82 aa6.52□□□□□ -1.37
NPIPB4-216ENST00000542338 NPSP0C0P6 89 aa6.52□□□□□ -1.37
NPIPB4-216ENST00000542338 LELP1Q5T871 98 aa6.52□□□□□ -1.37
NPIPB4-216ENST00000542338 LYPD5Q6UWN5 251 aa6.52□□□□□ -1.37
NPIPB4-216ENST00000542338 C2orf66Q6UXQ4 117 aa6.52□□□□□ -1.37
NPIPB4-216ENST00000542338 HIST3H2BBQ8N257 126 aa6.52□□□□□ -1.37
NPIPB4-216ENST00000542338 TOMM6Q96B49 74 aa6.52□□□□□ -1.37
NPIPB4-216ENST00000542338 TMEM141Q96I45 108 aa6.52□□□□□ -1.37
NPIPB4-216ENST00000542338 ZNF25P17030 456 aaPredicted RBP6.51□□□□□ -1.37
NPIPB4-216ENST00000542338 CCL18P55774 89 aa6.51□□□□□ -1.37
NPIPB4-216ENST00000542338 LINC00310P59036 64 aa6.51□□□□□ -1.37
NPIPB4-216ENST00000542338 DGAT2L7PQ6IED9 249 aa6.51□□□□□ -1.37
NPIPB4-216ENST00000542338 NTM-AS1Q6ZSK4 140 aa6.51□□□□□ -1.37
NPIPB4-216ENST00000542338 ERASQ7Z444 233 aa6.51□□□□□ -1.37
NPIPB4-216ENST00000542338 FAM19A2Q8N3H0 131 aa6.51□□□□□ -1.37
NPIPB4-216ENST00000542338 TMEM101Q96IK0 257 aa6.51□□□□□ -1.37
NPIPB4-216ENST00000542338 SCGB3A1Q96QR1 104 aa6.51□□□□□ -1.37
NPIPB4-216ENST00000542338 CHCHD5Q9BSY4 110 aa6.51□□□□□ -1.37
NPIPB4-216ENST00000542338 CHCHD7Q9BUK0 85 aa6.51□□□□□ -1.37
NPIPB4-216ENST00000542338 TIMM21Q9BVV7 248 aa6.51□□□□□ -1.37
NPIPB4-216ENST00000542338 PYGO1Q9Y3Y4 419 aa6.51□□□□□ -1.37
NPIPB4-216ENST00000542338 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.5□□□□□ -1.37
NPIPB4-216ENST00000542338 FAM229AH3BQW9 127 aa6.5□□□□□ -1.37
NPIPB4-216ENST00000542338 PDZD11Q5EBL8 140 aa6.5□□□□□ -1.37
NPIPB4-216ENST00000542338 AMMECR1LQ6DCA0 310 aa6.5□□□□□ -1.37
NPIPB4-216ENST00000542338 MRPL52Q86TS9 123 aaKnown RBP6.5□□□□□ -1.37
NPIPB4-216ENST00000542338 TIMM17AQ99595 171 aa6.5□□□□□ -1.37
NPIPB4-216ENST00000542338 SPANXA1Q9NS26 97 aa6.5□□□□□ -1.37
NPIPB4-216ENST00000542338 CSDC2Q9Y534 153 aaKnown RBP6.5□□□□□ -1.37
NPIPB4-216ENST00000542338 A0A1B0GUV1 79 aa6.49□□□□□ -1.37
NPIPB4-216ENST00000542338 FABP4P15090 132 aa6.49□□□□□ -1.37
NPIPB4-216ENST00000542338 AKR1D1P51857 326 aa6.49□□□□□ -1.37
NPIPB4-216ENST00000542338 PMCHL1Q16048 86 aa6.49□□□□□ -1.37
NPIPB4-216ENST00000542338 Q6ZN92 141 aa6.49□□□□□ -1.37
NPIPB4-216ENST00000542338 HIST1H2BLQ99880 126 aa6.49□□□□□ -1.37
NPIPB4-216ENST00000542338 MAP1LC3CQ9BXW4 147 aa6.49□□□□□ -1.37
NPIPB4-216ENST00000542338 TENM2Q9NT68 2774 aa6.48□□□□□ -1.37
NPIPB4-216ENST00000542338 A0A087WX48 190 aa6.48□□□□□ -1.37
NPIPB4-216ENST00000542338 A0A096LNJ9 63 aa6.48□□□□□ -1.37
NPIPB4-216ENST00000542338 TMEM262E9PQX1 116 aa6.48□□□□□ -1.37
NPIPB4-216ENST00000542338 FGF6P10767 208 aa6.48□□□□□ -1.37
NPIPB4-216ENST00000542338 ESRGQ1W209 222 aa6.48□□□□□ -1.37
NPIPB4-216ENST00000542338 DEFB104AQ8WTQ1 72 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms