RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 TLN2Q9Y4G6 2542 aa10.58□□□□□ -0.72
COLCA1-204ENST00000540738 KPRPQ5T749 579 aaPredicted RBP10.58□□□□□ -0.72
COLCA1-204ENST00000540738 ADAMTS20P59510 1910 aa10.58□□□□□ -0.72
COLCA1-204ENST00000540738 RS1O15537 224 aa10.57□□□□□ -0.72
COLCA1-204ENST00000540738 GAGE2AQ6NT46 116 aa10.57□□□□□ -0.72
COLCA1-204ENST00000540738 ZFAND2AQ8N6M9 145 aa10.57□□□□□ -0.72
COLCA1-204ENST00000540738 HIST1H4AP62805 103 aaKnown RBP10.57□□□□□ -0.72
COLCA1-204ENST00000540738 NAA38Q9BRA0 125 aaKnown RBP10.57□□□□□ -0.72
COLCA1-204ENST00000540738 PYY3Q5JQD4 70 aa10.56□□□□□ -0.72
COLCA1-204ENST00000540738 WFDC10AQ9H1F0 79 aa10.56□□□□□ -0.72
COLCA1-204ENST00000540738 CFAP126Q5VTH2 177 aa10.56□□□□□ -0.72
COLCA1-204ENST00000540738 H3BQ85 93 aa10.55□□□□□ -0.72
COLCA1-204ENST00000540738 GDF5OSQ5U4N7 250 aa10.55□□□□□ -0.72
COLCA1-204ENST00000540738 IGHV1-58A0A0C4DH39 117 aa10.55□□□□□ -0.72
COLCA1-204ENST00000540738 IGKV2-24A0A0C4DH68 120 aa10.55□□□□□ -0.72
COLCA1-204ENST00000540738 A0A0J9YWU9 116 aa10.55□□□□□ -0.72
COLCA1-204ENST00000540738 NHLRC4P0CG21 123 aaPredicted RBP10.55□□□□□ -0.72
COLCA1-204ENST00000540738 UFSP1Q6NVU6 142 aa10.55□□□□□ -0.72
COLCA1-204ENST00000540738 DEFB105AQ8NG35 78 aa10.55□□□□□ -0.72
COLCA1-204ENST00000540738 FRMD6-AS1P0C7T7 363 aa10.55□□□□□ -0.72
COLCA1-204ENST00000540738 B9D2Q9BPU9 175 aa10.55□□□□□ -0.72
COLCA1-204ENST00000540738 IGLC6P0CF74 106 aa10.54□□□□□ -0.72
COLCA1-204ENST00000540738 UBL5Q9BZL1 73 aa10.54□□□□□ -0.72
COLCA1-204ENST00000540738 COL4A2P08572 1712 aa10.54□□□□□ -0.72
COLCA1-204ENST00000540738 TRBV6-8A0A0A6YYG3 113 aa10.54□□□□□ -0.72
COLCA1-204ENST00000540738 MIAQ16674 131 aa10.54□□□□□ -0.72
COLCA1-204ENST00000540738 C7orf33Q8WU49 177 aa10.54□□□□□ -0.72
COLCA1-204ENST00000540738 CHCHD10Q8WYQ3 142 aaPredicted RBP10.54□□□□□ -0.72
COLCA1-204ENST00000540738 H0YGX0 51 aa10.53□□□□□ -0.72
COLCA1-204ENST00000540738 HIGD2BQ4VC39 106 aa10.53□□□□□ -0.72
COLCA1-204ENST00000540738 DCANP1Q8TF63 244 aa10.53□□□□□ -0.72
COLCA1-204ENST00000540738 WDR87Q6ZQQ6 2873 aa10.53□□□□□ -0.72
COLCA1-204ENST00000540738 EPG5Q9HCE0 2579 aa10.53□□□□□ -0.72
COLCA1-204ENST00000540738 BAALCQ8WXS3 180 aa10.53□□□□□ -0.72
COLCA1-204ENST00000540738 PLA2G2EQ9NZK7 142 aa10.53□□□□□ -0.72
COLCA1-204ENST00000540738 CEND1Q8N111 149 aa10.53□□□□□ -0.72
COLCA1-204ENST00000540738 U3KQK5 164 aa10.53□□□□□ -0.72
COLCA1-204ENST00000540738 USP9YO00507 2555 aaPredicted RBP10.52□□□□□ -0.72
COLCA1-204ENST00000540738 LOC105371267A0A1B0GV96 52 aa10.52□□□□□ -0.72
COLCA1-204ENST00000540738 IGLV2-18A0A075B6J9 118 aa10.52□□□□□ -0.73
COLCA1-204ENST00000540738 FUSP35637 526 aaKnown RBP eCLIP10.52□□□□□ -0.73
COLCA1-204ENST00000540738 LELP1Q5T871 98 aa10.52□□□□□ -0.73
COLCA1-204ENST00000540738 OPRPNQ99935 248 aaPredicted RBP10.52□□□□□ -0.73
COLCA1-204ENST00000540738 EML5Q05BV3 1969 aa10.52□□□□□ -0.73
COLCA1-204ENST00000540738 NEXN-AS1Q8NBZ9 246 aa10.52□□□□□ -0.73
COLCA1-204ENST00000540738 ORMDL1Q9P0S3 153 aa10.52□□□□□ -0.73
COLCA1-204ENST00000540738 Q6ZUT4 128 aa10.51□□□□□ -0.73
COLCA1-204ENST00000540738 C11orf86A6NJI1 115 aa10.51□□□□□ -0.73
COLCA1-204ENST00000540738 MLST8Q9BVC4 326 aa10.51□□□□□ -0.73
COLCA1-204ENST00000540738 ARHGAP32A7KAX9 2087 aa10.51□□□□□ -0.73
COLCA1-204ENST00000540738 PROK1P58294 105 aa10.51□□□□□ -0.73
COLCA1-204ENST00000540738 NANOS2P60321 138 aaKnown RBP10.51□□□□□ -0.73
COLCA1-204ENST00000540738 IGLC3P0DOY3 106 aa10.51□□□□□ -0.73
COLCA1-204ENST00000540738 ODF3L2Q3SX64 289 aa10.51□□□□□ -0.73
COLCA1-204ENST00000540738 KLLNB2CW77 178 aa10.5□□□□□ -0.73
COLCA1-204ENST00000540738 IGHV4-4A0A075B6R2 117 aa10.5□□□□□ -0.73
COLCA1-204ENST00000540738 PKD1L2Q7Z442 2459 aa10.5□□□□□ -0.73
COLCA1-204ENST00000540738 DIRC1Q969H9 104 aa10.49□□□□□ -0.73
COLCA1-204ENST00000540738 CARD19Q96LW7 228 aa10.49□□□□□ -0.73
COLCA1-204ENST00000540738 CFC1BP0CG36 223 aa10.49□□□□□ -0.73
COLCA1-204ENST00000540738 CFC1P0CG37 223 aa10.49□□□□□ -0.73
COLCA1-204ENST00000540738 M0R2N4 97 aa10.49□□□□□ -0.73
COLCA1-204ENST00000540738 CRYBA4P53673 196 aa10.49□□□□□ -0.73
COLCA1-204ENST00000540738 PIK3CD-AS1Q5SR53 167 aa10.49□□□□□ -0.73
COLCA1-204ENST00000540738 MRGPRG-AS1Q2M3A8 158 aa10.48□□□□□ -0.73
COLCA1-204ENST00000540738 DOPEY1Q5JWR5 2465 aa10.48□□□□□ -0.73
COLCA1-204ENST00000540738 TINCRA0A1B0GVN0 87 aa10.48□□□□□ -0.73
COLCA1-204ENST00000540738 TDRG1Q3Y452 100 aa10.47□□□□□ -0.73
COLCA1-204ENST00000540738 LINC00322Q6ZN03 302 aaPredicted RBP10.47□□□□□ -0.73
COLCA1-204ENST00000540738 NCR3O14931 201 aa10.47□□□□□ -0.73
COLCA1-204ENST00000540738 FN1P02751 2386 aaKnown RBP10.47□□□□□ -0.73
COLCA1-204ENST00000540738 SYCNQ0VAF6 134 aa10.47□□□□□ -0.73
COLCA1-204ENST00000540738 LINC00467Q9BRT7 94 aa10.46□□□□□ -0.73
COLCA1-204ENST00000540738 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.46□□□□□ -0.73
COLCA1-204ENST00000540738 M0QY20 66 aa10.46□□□□□ -0.73
COLCA1-204ENST00000540738 HAMPP81172 84 aa10.46□□□□□ -0.73
COLCA1-204ENST00000540738 PLXNB1O43157 2135 aa10.46□□□□□ -0.74
COLCA1-204ENST00000540738 IGLV2-8P01709 118 aa10.46□□□□□ -0.74
COLCA1-204ENST00000540738 MIR7-3HGQ8N6C7 128 aa10.46□□□□□ -0.74
COLCA1-204ENST00000540738 RAI1Q7Z5J4 1906 aaPredicted RBP10.45□□□□□ -0.74
COLCA1-204ENST00000540738 NDUFB1O75438 58 aa10.45□□□□□ -0.74
COLCA1-204ENST00000540738 E9PLD3 99 aa10.45□□□□□ -0.74
COLCA1-204ENST00000540738 A0A087WZ39 114 aa10.45□□□□□ -0.74
COLCA1-204ENST00000540738 OCIAD2Q56VL3 154 aa10.45□□□□□ -0.74
COLCA1-204ENST00000540738 CEMP1Q6PRD7 247 aaPredicted RBP10.45□□□□□ -0.74
COLCA1-204ENST00000540738 COA6Q5JTJ3 125 aaKnown RBP10.45□□□□□ -0.74
COLCA1-204ENST00000540738 A0A1B0GXF2 115 aa10.44□□□□□ -0.74
COLCA1-204ENST00000540738 Q8N2B8 174 aa10.44□□□□□ -0.74
COLCA1-204ENST00000540738 RBX1P62877 108 aa10.44□□□□□ -0.74
COLCA1-204ENST00000540738 hADV29S1A0JD25 119 aa10.44□□□□□ -0.74
COLCA1-204ENST00000540738 C9orf118A6NHY6 69 aa10.44□□□□□ -0.74
COLCA1-204ENST00000540738 MUSTN1Q8IVN3 82 aa10.43□□□□□ -0.74
COLCA1-204ENST00000540738 CITED1Q99966 193 aa10.43□□□□□ -0.74
COLCA1-204ENST00000540738 CLUHP3Q96NS8 147 aa10.43□□□□□ -0.74
COLCA1-204ENST00000540738 C9orf153Q5TBE3 101 aa10.43□□□□□ -0.74
COLCA1-204ENST00000540738 Q8N976 141 aa10.43□□□□□ -0.74
COLCA1-204ENST00000540738 C12orf74Q32Q52 190 aa10.42□□□□□ -0.74
COLCA1-204ENST00000540738 CHCHD7Q9BUK0 85 aa10.42□□□□□ -0.74
COLCA1-204ENST00000540738 TRBV6-5A0A0K0K1A5 114 aa10.42□□□□□ -0.74
COLCA1-204ENST00000540738 PCP2Q8IVA1 136 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms