RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 GAGE6Q13070 117 aa12.24□□□□□ -0.45
COPS3-212ENST00000539941 CSNK1G2-AS1Q8NCQ2 148 aa12.24□□□□□ -0.45
COPS3-212ENST00000539941 PGPEP1Q9NXJ5 209 aa12.24□□□□□ -0.45
COPS3-212ENST00000539941 VWFP04275 2813 aa12.24□□□□□ -0.45
COPS3-212ENST00000539941 H3BMG7 143 aa12.23□□□□□ -0.45
COPS3-212ENST00000539941 SPINK8P0C7L1 97 aa12.23□□□□□ -0.45
COPS3-212ENST00000539941 IFI27P40305 119 aaPredicted RBP12.23□□□□□ -0.45
COPS3-212ENST00000539941 TCTAP57738 103 aa12.23□□□□□ -0.45
COPS3-212ENST00000539941 TMEM263Q8WUH6 116 aaKnown RBP12.23□□□□□ -0.45
COPS3-212ENST00000539941 NXT2Q9NPJ8 142 aaKnown RBP12.23□□□□□ -0.45
COPS3-212ENST00000539941 NOTCH3Q9UM47 2321 aa12.23□□□□□ -0.45
COPS3-212ENST00000539941 CMYA5Q8N3K9 4069 aa12.23□□□□□ -0.45
COPS3-212ENST00000539941 IGHV3OR16-12A0A075B7B8 117 aa12.22□□□□□ -0.45
COPS3-212ENST00000539941 A0A096LNJ9 63 aa12.22□□□□□ -0.45
COPS3-212ENST00000539941 LOC389332A0A1B0GUA5 103 aa12.22□□□□□ -0.45
COPS3-212ENST00000539941 GAS8-AS1O95177 125 aa12.22□□□□□ -0.45
COPS3-212ENST00000539941 ETDBQ3ZM63 59 aa12.22□□□□□ -0.45
COPS3-212ENST00000539941 LYRM7Q5U5X0 104 aa12.22□□□□□ -0.45
COPS3-212ENST00000539941 IL17DQ8TAD2 202 aa12.22□□□□□ -0.45
COPS3-212ENST00000539941 JPT2Q9H910 190 aa12.22□□□□□ -0.45
COPS3-212ENST00000539941 PRO0461Q9UI25 63 aa12.22□□□□□ -0.45
COPS3-212ENST00000539941 MGAM2Q2M2H8 2515 aa12.22□□□□□ -0.45
COPS3-212ENST00000539941 TRAV26-2A0A0B4J265 109 aa12.22□□□□□ -0.45
COPS3-212ENST00000539941 LINC01546A6NGU7 62 aa12.22□□□□□ -0.45
COPS3-212ENST00000539941 A8MWV9 139 aa12.22□□□□□ -0.45
COPS3-212ENST00000539941 APOMO95445 188 aa12.22□□□□□ -0.45
COPS3-212ENST00000539941 CRYGDP07320 174 aa12.22□□□□□ -0.45
COPS3-212ENST00000539941 GATA1P15976 413 aaPredicted RBP12.22□□□□□ -0.45
COPS3-212ENST00000539941 PCP2Q8IVA1 136 aa12.22□□□□□ -0.45
COPS3-212ENST00000539941 C20orf78Q9BR46 151 aa12.22□□□□□ -0.45
COPS3-212ENST00000539941 ZMAT4Q9H898 229 aa12.22□□□□□ -0.45
COPS3-212ENST00000539941 ATP5LO75964 103 aa12.21□□□□□ -0.45
COPS3-212ENST00000539941 PRM2P04554 102 aa12.21□□□□□ -0.45
COPS3-212ENST00000539941 FOXI1Q12951 378 aa12.21□□□□□ -0.45
COPS3-212ENST00000539941 RRN3P1Q2M238 152 aa12.21□□□□□ -0.45
COPS3-212ENST00000539941 NHP2Q9NX24 153 aaKnown RBP12.21□□□□□ -0.45
COPS3-212ENST00000539941 A0A087WWL8 130 aa12.2□□□□□ -0.46
COPS3-212ENST00000539941 Q8N8P6 123 aa12.2□□□□□ -0.46
COPS3-212ENST00000539941 KIR2DL5BQ8NHK3 375 aa12.2□□□□□ -0.46
COPS3-212ENST00000539941 RASL10AQ92737 203 aa12.2□□□□□ -0.46
COPS3-212ENST00000539941 C16orf74Q96GX8 76 aa12.2□□□□□ -0.46
COPS3-212ENST00000539941 A0A1B0GWB2 263 aa12.19□□□□□ -0.46
COPS3-212ENST00000539941 TMEM262E9PQX1 116 aa12.19□□□□□ -0.46
COPS3-212ENST00000539941 F5H697 171 aa12.19□□□□□ -0.46
COPS3-212ENST00000539941 C12orf74Q32Q52 190 aa12.19□□□□□ -0.46
COPS3-212ENST00000539941 FAM74A4Q5TZK3 123 aa12.19□□□□□ -0.46
COPS3-212ENST00000539941 SUMO4Q6EEV6 95 aa12.19□□□□□ -0.46
COPS3-212ENST00000539941 IGLV2-18A0A075B6J9 118 aa12.18□□□□□ -0.46
COPS3-212ENST00000539941 APOC4P55056 127 aa12.18□□□□□ -0.46
COPS3-212ENST00000539941 SUMO2P61956 95 aaKnown RBP12.18□□□□□ -0.46
COPS3-212ENST00000539941 RPL32P62910 135 aaKnown RBP12.18□□□□□ -0.46
COPS3-212ENST00000539941 ANAPC13Q9BS18 74 aa12.18□□□□□ -0.46
COPS3-212ENST00000539941 SMIM2Q9BVW6 85 aa12.18□□□□□ -0.46
COPS3-212ENST00000539941 EDA2RQ9HAV5 297 aa12.18□□□□□ -0.46
COPS3-212ENST00000539941 TRBV25-1A0A075B6N4 114 aa12.17□□□□□ -0.46
COPS3-212ENST00000539941 RHODO00212 210 aa12.17□□□□□ -0.46
COPS3-212ENST00000539941 DAZ2Q13117 558 aaKnown RBP12.17□□□□□ -0.46
COPS3-212ENST00000539941 ZNF56Q15929 161 aa12.17□□□□□ -0.46
COPS3-212ENST00000539941 Q6ZUT4 128 aa12.17□□□□□ -0.46
COPS3-212ENST00000539941 SH2D6Q7Z4S9 175 aa12.17□□□□□ -0.46
COPS3-212ENST00000539941 CDIP1Q9H305 208 aa12.17□□□□□ -0.46
COPS3-212ENST00000539941 K7EMI3 77 aa12.16□□□□□ -0.46
COPS3-212ENST00000539941 IGKCP01834 107 aa12.16□□□□□ -0.46
COPS3-212ENST00000539941 EGFEM1PQ0D2K5 195 aa12.16□□□□□ -0.46
COPS3-212ENST00000539941 PPDPFLQ8WWR9 84 aa12.16□□□□□ -0.46
COPS3-212ENST00000539941 RPL39LQ96EH5 51 aaKnown RBP12.16□□□□□ -0.46
COPS3-212ENST00000539941 TRBV6-5A0A0K0K1A5 114 aa12.16□□□□□ -0.46
COPS3-212ENST00000539941 H7C1H1 209 aa12.16□□□□□ -0.46
COPS3-212ENST00000539941 DPM2O94777 84 aa12.16□□□□□ -0.46
COPS3-212ENST00000539941 CFAP126Q5VTH2 177 aa12.16□□□□□ -0.46
COPS3-212ENST00000539941 M0QY20 66 aa12.15□□□□□ -0.46
COPS3-212ENST00000539941 RS1O15537 224 aa12.15□□□□□ -0.46
COPS3-212ENST00000539941 ZFAND6Q6FIF0 208 aa12.15□□□□□ -0.46
COPS3-212ENST00000539941 MEGF8Q7Z7M0 2845 aa12.14□□□□□ -0.47
COPS3-212ENST00000539941 SMIM9A6NGZ8 99 aa12.14□□□□□ -0.47
COPS3-212ENST00000539941 K7ERJ3 54 aa12.14□□□□□ -0.47
COPS3-212ENST00000539941 ODF1Q14990 250 aa12.14□□□□□ -0.47
COPS3-212ENST00000539941 OXLD1Q5BKU9 147 aa12.14□□□□□ -0.47
COPS3-212ENST00000539941 ZFP2Q6ZN57 461 aa12.14□□□□□ -0.47
COPS3-212ENST00000539941 RNF183Q96D59 192 aa12.14□□□□□ -0.47
COPS3-212ENST00000539941 PLAC8L1A1L4L8 177 aa12.13□□□□□ -0.47
COPS3-212ENST00000539941 FCER1GP30273 86 aa12.13□□□□□ -0.47
COPS3-212ENST00000539941 C18orf15Q96N68 181 aa12.13□□□□□ -0.47
COPS3-212ENST00000539941 OVOL2Q9BRP0 275 aa12.13□□□□□ -0.47
COPS3-212ENST00000539941 HHLA3Q9XRX5 114 aa12.13□□□□□ -0.47
COPS3-212ENST00000539941 TRGV1A0A0A0MS02 117 aa12.13□□□□□ -0.47
COPS3-212ENST00000539941 LAGE3Q14657 143 aa12.13□□□□□ -0.47
COPS3-212ENST00000539941 POLR2KP53803 58 aaKnown RBP12.12□□□□□ -0.47
COPS3-212ENST00000539941 DKK2Q9UBU2 259 aa12.12□□□□□ -0.47
COPS3-212ENST00000539941 ORMDL2Q53FV1 153 aa12.11□□□□□ -0.47
COPS3-212ENST00000539941 NOP10Q9NPE3 64 aaKnown RBP12.11□□□□□ -0.47
COPS3-212ENST00000539941 NACAE9PAV3 2078 aa12.11□□□□□ -0.47
COPS3-212ENST00000539941 TRAV4A0A0B4J268 109 aa12.1□□□□□ -0.47
COPS3-212ENST00000539941 M0QXV9 152 aa12.1□□□□□ -0.47
COPS3-212ENST00000539941 VCYO14598 125 aa12.1□□□□□ -0.47
COPS3-212ENST00000539941 IGHV4-30-4P0DP06 118 aa12.1□□□□□ -0.47
COPS3-212ENST00000539941 HIST1H4GQ99525 98 aa12.1□□□□□ -0.47
COPS3-212ENST00000539941 SS18L2Q9UHA2 77 aa12.1□□□□□ -0.47
COPS3-212ENST00000539941 SDHAF1A6NFY7 115 aa12.1□□□□□ -0.47
COPS3-212ENST00000539941 A8MZ25 164 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms