RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 NUDT3O95989 172 aa11.3□□□□□ -0.6
TRAF3-204ENST00000539721 FABP4P15090 132 aa11.3□□□□□ -0.6
TRAF3-204ENST00000539721 HIST1H2BLQ99880 126 aa11.3□□□□□ -0.6
TRAF3-204ENST00000539721 TRAV10A0A0B4J240 114 aa11.29□□□□□ -0.6
TRAF3-204ENST00000539721 HBDP02042 147 aa11.29□□□□□ -0.6
TRAF3-204ENST00000539721 COTL1Q14019 142 aa11.29□□□□□ -0.6
TRAF3-204ENST00000539721 COL7A1Q02388 2944 aa11.29□□□□□ -0.6
TRAF3-204ENST00000539721 A0A096LNJ9 63 aa11.28□□□□□ -0.6
TRAF3-204ENST00000539721 BTF3P20290 206 aaKnown RBP11.28□□□□□ -0.6
TRAF3-204ENST00000539721 ICOSQ9Y6W8 199 aa11.28□□□□□ -0.6
TRAF3-204ENST00000539721 ATP6V0E2Q8NHE4 81 aa11.27□□□□□ -0.61
TRAF3-204ENST00000539721 PACRGQ96M98 296 aaPredicted RBP11.27□□□□□ -0.61
TRAF3-204ENST00000539721 A0A096LPF7 62 aa11.26□□□□□ -0.61
TRAF3-204ENST00000539721 LOC105371267A0A1B0GV96 52 aa11.26□□□□□ -0.61
TRAF3-204ENST00000539721 MRPL23Q16540 153 aaKnown RBP11.26□□□□□ -0.61
TRAF3-204ENST00000539721 H3BNG1 76 aa11.26□□□□□ -0.61
TRAF3-204ENST00000539721 LEPROTL1O95214 131 aa11.26□□□□□ -0.61
TRAF3-204ENST00000539721 G0S2P27469 103 aa11.26□□□□□ -0.61
TRAF3-204ENST00000539721 C2orf66Q6UXQ4 117 aa11.25□□□□□ -0.61
TRAF3-204ENST00000539721 NTM-AS1Q6ZSK4 140 aa11.24□□□□□ -0.61
TRAF3-204ENST00000539721 GTSF1LQ9H1H1 148 aa11.24□□□□□ -0.61
TRAF3-204ENST00000539721 CYSLTR1Q9Y271 337 aa11.24□□□□□ -0.61
TRAF3-204ENST00000539721 TMEM97Q5BJF2 176 aa11.23□□□□□ -0.61
TRAF3-204ENST00000539721 SH2D6Q7Z4S9 175 aa11.23□□□□□ -0.61
TRAF3-204ENST00000539721 C20orf203Q8NBC4 194 aa11.23□□□□□ -0.61
TRAF3-204ENST00000539721 OR10D4PQ8NGN7 298 aa11.23□□□□□ -0.61
TRAF3-204ENST00000539721 TOMM6Q96B49 74 aa11.23□□□□□ -0.61
TRAF3-204ENST00000539721 CHCHD7Q9BUK0 85 aa11.23□□□□□ -0.61
TRAF3-204ENST00000539721 HSPB8Q9UJY1 196 aa11.23□□□□□ -0.61
TRAF3-204ENST00000539721 RPL39P62891 51 aaKnown RBP11.23□□□□□ -0.61
TRAF3-204ENST00000539721 LINC00173Q6ZV60 143 aa11.23□□□□□ -0.61
TRAF3-204ENST00000539721 AKR1D1P51857 326 aa11.22□□□□□ -0.61
TRAF3-204ENST00000539721 TRBV25-1A0A075B6N4 114 aa11.21□□□□□ -0.61
TRAF3-204ENST00000539721 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.21□□□□□ -0.61
TRAF3-204ENST00000539721 TRBV6-8A0A0A6YYG3 113 aa11.21□□□□□ -0.61
TRAF3-204ENST00000539721 IGKV2-29A2NJV5 120 aaPredicted RBP11.21□□□□□ -0.61
TRAF3-204ENST00000539721 LINC01549A6NIU2 74 aa11.21□□□□□ -0.61
TRAF3-204ENST00000539721 STAB2Q8WWQ8 2551 aa11.21□□□□□ -0.61
TRAF3-204ENST00000539721 SCGB3A1Q96QR1 104 aa11.21□□□□□ -0.62
TRAF3-204ENST00000539721 TMEM243Q9BU79 118 aa11.21□□□□□ -0.62
TRAF3-204ENST00000539721 ATP5LO75964 103 aa11.19□□□□□ -0.62
TRAF3-204ENST00000539721 KRTDAPP60985 99 aa11.19□□□□□ -0.62
TRAF3-204ENST00000539721 IFI27L1Q96BM0 104 aa11.19□□□□□ -0.62
TRAF3-204ENST00000539721 UBE2L6O14933 153 aa11.18□□□□□ -0.62
TRAF3-204ENST00000539721 ERASQ7Z444 233 aa11.18□□□□□ -0.62
TRAF3-204ENST00000539721 C15orf53Q8NAA6 179 aa11.18□□□□□ -0.62
TRAF3-204ENST00000539721 MAP1LC3CQ9BXW4 147 aa11.18□□□□□ -0.62
TRAF3-204ENST00000539721 IGLL5B9A064 214 aa11.18□□□□□ -0.62
TRAF3-204ENST00000539721 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.18□□□□□ -0.62
TRAF3-204ENST00000539721 C3orf79P0CE67 100 aa11.18□□□□□ -0.62
TRAF3-204ENST00000539721 CHCHD5Q9BSY4 110 aa11.17□□□□□ -0.62
TRAF3-204ENST00000539721 FBN3Q75N90 2809 aa11.17□□□□□ -0.62
TRAF3-204ENST00000539721 IGIPA6NJ69 53 aa11.16□□□□□ -0.62
TRAF3-204ENST00000539721 H0Y8G0 127 aa11.16□□□□□ -0.62
TRAF3-204ENST00000539721 LYPD5Q6UWN5 251 aa11.16□□□□□ -0.62
TRAF3-204ENST00000539721 TIMM17AQ99595 171 aa11.16□□□□□ -0.62
TRAF3-204ENST00000539721 UBE2D4Q9Y2X8 147 aa11.16□□□□□ -0.62
TRAF3-204ENST00000539721 Q6ZN92 141 aa11.16□□□□□ -0.62
TRAF3-204ENST00000539721 TMEM141Q96I45 108 aa11.16□□□□□ -0.62
TRAF3-204ENST00000539721 SPANXA1Q9NS26 97 aa11.16□□□□□ -0.62
TRAF3-204ENST00000539721 H7C423 109 aa11.15□□□□□ -0.62
TRAF3-204ENST00000539721 FGF6P10767 208 aa11.15□□□□□ -0.62
TRAF3-204ENST00000539721 SMAGPQ0VAQ4 97 aa11.15□□□□□ -0.62
TRAF3-204ENST00000539721 GAGE6Q13070 117 aa11.15□□□□□ -0.62
TRAF3-204ENST00000539721 LELP1Q5T871 98 aa11.15□□□□□ -0.62
TRAF3-204ENST00000539721 CEMP1Q6PRD7 247 aaPredicted RBP11.15□□□□□ -0.62
TRAF3-204ENST00000539721 PYGO1Q9Y3Y4 419 aa11.15□□□□□ -0.62
TRAF3-204ENST00000539721 SYS1-DBNDD2H3BUS1 97 aa11.14□□□□□ -0.63
TRAF3-204ENST00000539721 PRSS1P07477 247 aa11.14□□□□□ -0.63
TRAF3-204ENST00000539721 TIRAPP58753 221 aa11.14□□□□□ -0.63
TRAF3-204ENST00000539721 AMMECR1LQ6DCA0 310 aa11.14□□□□□ -0.63
TRAF3-204ENST00000539721 TIMM21Q9BVV7 248 aa11.14□□□□□ -0.63
TRAF3-204ENST00000539721 DGAT2L7PQ6IED9 249 aa11.13□□□□□ -0.63
TRAF3-204ENST00000539721 OPRPNQ99935 248 aaPredicted RBP11.13□□□□□ -0.63
TRAF3-204ENST00000539721 PET117Q6UWS5 81 aa11.13□□□□□ -0.63
TRAF3-204ENST00000539721 MRPL52Q86TS9 123 aaKnown RBP11.13□□□□□ -0.63
TRAF3-204ENST00000539721 BAALCQ8WXS3 180 aa11.13□□□□□ -0.63
TRAF3-204ENST00000539721 IGLV4-3A0A075B6K6 122 aa11.12□□□□□ -0.63
TRAF3-204ENST00000539721 NUPR2A6NF83 97 aa11.12□□□□□ -0.63
TRAF3-204ENST00000539721 ESRGQ1W209 222 aa11.12□□□□□ -0.63
TRAF3-204ENST00000539721 TMEM101Q96IK0 257 aa11.12□□□□□ -0.63
TRAF3-204ENST00000539721 TMEM262E9PQX1 116 aa11.11□□□□□ -0.63
TRAF3-204ENST00000539721 SCGB1D1O95968 90 aa11.11□□□□□ -0.63
TRAF3-204ENST00000539721 NPSP0C0P6 89 aa11.11□□□□□ -0.63
TRAF3-204ENST00000539721 SPATA12Q7Z6I5 190 aa11.11□□□□□ -0.63
TRAF3-204ENST00000539721 TRAV8-6A0A0B4J262 113 aa11.11□□□□□ -0.63
TRAF3-204ENST00000539721 ZNF25P17030 456 aaPredicted RBP11.11□□□□□ -0.63
TRAF3-204ENST00000539721 JOSD1Q15040 202 aaPredicted RBP11.11□□□□□ -0.63
TRAF3-204ENST00000539721 PAPPA-AS1Q5QFB9 102 aa11.11□□□□□ -0.63
TRAF3-204ENST00000539721 Q6ZUT4 128 aa11.11□□□□□ -0.63
TRAF3-204ENST00000539721 OR5A1Q8NGJ0 315 aa11.11□□□□□ -0.63
TRAF3-204ENST00000539721 KLK5Q9Y337 293 aaPredicted RBP11.11□□□□□ -0.63
TRAF3-204ENST00000539721 CSDC2Q9Y534 153 aaKnown RBP11.11□□□□□ -0.63
TRAF3-204ENST00000539721 C20orf202A1L168 122 aa11.1□□□□□ -0.63
TRAF3-204ENST00000539721 MRPS36P82909 103 aaKnown RBP11.1□□□□□ -0.63
TRAF3-204ENST00000539721 ZC2HC1BQ5TFG8 222 aa11.1□□□□□ -0.63
TRAF3-204ENST00000539721 PMVKQ15126 192 aa11.09□□□□□ -0.63
TRAF3-204ENST00000539721 RNASE13Q5GAN3 156 aaKnown RBP11.09□□□□□ -0.63
TRAF3-204ENST00000539721 PYY3Q5JQD4 70 aa11.09□□□□□ -0.63
TRAF3-204ENST00000539721 Q8N976 141 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms