RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 GATCO43716 136 aaKnown RBP9.28□□□□□ -0.92
RTN3P1-201ENST00000536295 AMTP48728 403 aa9.28□□□□□ -0.92
RTN3P1-201ENST00000536295 COTL1Q14019 142 aa9.28□□□□□ -0.92
RTN3P1-201ENST00000536295 KRTAP26-1Q6PEX3 210 aa9.28□□□□□ -0.92
RTN3P1-201ENST00000536295 GATD1Q8NB37 220 aa9.28□□□□□ -0.92
RTN3P1-201ENST00000536295 CNFNQ9BYD5 112 aa9.28□□□□□ -0.92
RTN3P1-201ENST00000536295 FOXA3P55318 350 aaPredicted RBP9.27□□□□□ -0.93
RTN3P1-201ENST00000536295 SMIM15Q7Z3B0 74 aa9.27□□□□□ -0.93
RTN3P1-201ENST00000536295 CIRBP-AS1Q8TBR5 109 aa9.27□□□□□ -0.93
RTN3P1-201ENST00000536295 PGLYRP4Q96LB8 373 aa9.27□□□□□ -0.93
RTN3P1-201ENST00000536295 GFRA4Q9GZZ7 299 aa9.27□□□□□ -0.93
RTN3P1-201ENST00000536295 RPL39LQ96EH5 51 aaKnown RBP9.26□□□□□ -0.93
RTN3P1-201ENST00000536295 EIF5A2Q9GZV4 153 aaKnown RBP9.26□□□□□ -0.93
RTN3P1-201ENST00000536295 DMBT1Q9UGM3 2413 aaPredicted RBP9.25□□□□□ -0.93
RTN3P1-201ENST00000536295 A0A1B0GUV1 79 aa9.25□□□□□ -0.93
RTN3P1-201ENST00000536295 LYPD6BQ8NI32 183 aa9.25□□□□□ -0.93
RTN3P1-201ENST00000536295 TRAV8-4A0A0B4J246 113 aa9.24□□□□□ -0.93
RTN3P1-201ENST00000536295 IGKV3OR2-268A0A0C4DH90 116 aa9.24□□□□□ -0.93
RTN3P1-201ENST00000536295 A8MWL6 223 aa9.24□□□□□ -0.93
RTN3P1-201ENST00000536295 DGAT2L7PQ6IED9 249 aa9.24□□□□□ -0.93
RTN3P1-201ENST00000536295 FAM231DQ6ZW35 169 aa9.24□□□□□ -0.93
RTN3P1-201ENST00000536295 hDV102S1A0JD36 115 aa9.23□□□□□ -0.93
RTN3P1-201ENST00000536295 J3QL48 77 aa9.23□□□□□ -0.93
RTN3P1-201ENST00000536295 SMIM7Q9BQ49 75 aa9.23□□□□□ -0.93
RTN3P1-201ENST00000536295 C9orf163Q8N9P6 203 aa9.22□□□□□ -0.93
RTN3P1-201ENST00000536295 CLRN3Q8NCR9 226 aa9.22□□□□□ -0.93
RTN3P1-201ENST00000536295 BORCS7Q96B45 105 aa9.22□□□□□ -0.93
RTN3P1-201ENST00000536295 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.21□□□□□ -0.94
RTN3P1-201ENST00000536295 IGKV2-29A2NJV5 120 aaPredicted RBP9.21□□□□□ -0.94
RTN3P1-201ENST00000536295 SDHAF1A6NFY7 115 aa9.21□□□□□ -0.94
RTN3P1-201ENST00000536295 ZNF727A8MUV8 499 aa9.21□□□□□ -0.94
RTN3P1-201ENST00000536295 APCSP02743 223 aa9.21□□□□□ -0.94
RTN3P1-201ENST00000536295 CT83Q5H943 113 aa9.21□□□□□ -0.94
RTN3P1-201ENST00000536295 AMMECR1LQ6DCA0 310 aa9.21□□□□□ -0.94
RTN3P1-201ENST00000536295 RNASEKQ6P5S7 137 aaKnown RBP9.21□□□□□ -0.94
RTN3P1-201ENST00000536295 TEX261Q6UWH6 196 aa9.21□□□□□ -0.94
RTN3P1-201ENST00000536295 LINC01551Q86U37 167 aa9.21□□□□□ -0.94
RTN3P1-201ENST00000536295 FAM210AQ96ND0 272 aa9.21□□□□□ -0.94
RTN3P1-201ENST00000536295 A0A1B0GVG6 124 aa9.2□□□□□ -0.94
RTN3P1-201ENST00000536295 GAGE12HA6NDE8 117 aa9.2□□□□□ -0.94
RTN3P1-201ENST00000536295 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.2□□□□□ -0.94
RTN3P1-201ENST00000536295 HIGD1CA8MV81 97 aa9.19□□□□□ -0.94
RTN3P1-201ENST00000536295 GAS8-AS1O95177 125 aa9.19□□□□□ -0.94
RTN3P1-201ENST00000536295 NCR2O95944 276 aa9.19□□□□□ -0.94
RTN3P1-201ENST00000536295 SRP19P09132 144 aaKnown RBP9.19□□□□□ -0.94
RTN3P1-201ENST00000536295 PMCHP20382 165 aa9.19□□□□□ -0.94
RTN3P1-201ENST00000536295 KRTAP10-4P60372 401 aaPredicted RBP9.19□□□□□ -0.94
RTN3P1-201ENST00000536295 TSKUQ8WUA8 353 aa9.19□□□□□ -0.94
RTN3P1-201ENST00000536295 AP5S1Q9NUS5 200 aa9.19□□□□□ -0.94
RTN3P1-201ENST00000536295 A0A1B0GUT8 65 aa9.18□□□□□ -0.94
RTN3P1-201ENST00000536295 PANO1I0J062 215 aa9.18□□□□□ -0.94
RTN3P1-201ENST00000536295 I3L3M4 83 aa9.18□□□□□ -0.94
RTN3P1-201ENST00000536295 FGF6P10767 208 aa9.18□□□□□ -0.94
RTN3P1-201ENST00000536295 CNBPP62633 177 aaKnown RBP9.18□□□□□ -0.94
RTN3P1-201ENST00000536295 SDIM1Q6ZPB5 146 aa9.18□□□□□ -0.94
RTN3P1-201ENST00000536295 RPL37AP61513 92 aaKnown RBP9.17□□□□□ -0.94
RTN3P1-201ENST00000536295 ST20Q9HBF5 79 aa9.17□□□□□ -0.94
RTN3P1-201ENST00000536295 OSTCQ9NRP0 149 aa9.17□□□□□ -0.94
RTN3P1-201ENST00000536295 IGHV3-64A0A075B6Q5 118 aa9.16□□□□□ -0.94
RTN3P1-201ENST00000536295 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.16□□□□□ -0.94
RTN3P1-201ENST00000536295 TRBV6-5A0A0K0K1A5 114 aa9.16□□□□□ -0.94
RTN3P1-201ENST00000536295 H7C423 109 aa9.16□□□□□ -0.94
RTN3P1-201ENST00000536295 NDUFS6O75380 124 aaKnown RBP9.16□□□□□ -0.94
RTN3P1-201ENST00000536295 SLPIP03973 132 aa9.16□□□□□ -0.94
RTN3P1-201ENST00000536295 C15orf56Q8N910 161 aa9.16□□□□□ -0.94
RTN3P1-201ENST00000536295 CHCHD10Q8WYQ3 142 aaPredicted RBP9.16□□□□□ -0.94
RTN3P1-201ENST00000536295 RNF185Q96GF1 192 aa9.16□□□□□ -0.94
RTN3P1-201ENST00000536295 TMEM191AQ9H0A3 160 aa9.16□□□□□ -0.94
RTN3P1-201ENST00000536295 TMEM242Q9NWH2 141 aa9.16□□□□□ -0.94
RTN3P1-201ENST00000536295 FAM231BA6NCW3 169 aa9.15□□□□□ -0.94
RTN3P1-201ENST00000536295 KRTAP29-1A8MX34 341 aaPredicted RBP9.15□□□□□ -0.94
RTN3P1-201ENST00000536295 TSHBP01222 138 aa9.15□□□□□ -0.94
RTN3P1-201ENST00000536295 RAB4AP20338 218 aa9.15□□□□□ -0.94
RTN3P1-201ENST00000536295 RPS10P46783 165 aaKnown RBP9.15□□□□□ -0.94
RTN3P1-201ENST00000536295 HIGD2BQ4VC39 106 aa9.15□□□□□ -0.94
RTN3P1-201ENST00000536295 AMN1Q8IY45 258 aa9.15□□□□□ -0.94
RTN3P1-201ENST00000536295 DPH3Q96FX2 82 aa9.15□□□□□ -0.94
RTN3P1-201ENST00000536295 BTF3L4Q96K17 158 aa9.15□□□□□ -0.94
RTN3P1-201ENST00000536295 V9GYV3 84 aa9.15□□□□□ -0.94
RTN3P1-201ENST00000536295 SMKR1H3BMG3 65 aa9.14□□□□□ -0.95
RTN3P1-201ENST00000536295 CHTF8P0CG12 524 aa9.14□□□□□ -0.95
RTN3P1-201ENST00000536295 TMEM241Q24JQ0 296 aa9.14□□□□□ -0.95
RTN3P1-201ENST00000536295 CFAP161Q6P656 301 aa9.14□□□□□ -0.95
RTN3P1-201ENST00000536295 ISOC2Q96AB3 205 aa9.14□□□□□ -0.95
RTN3P1-201ENST00000536295 TMEM101Q96IK0 257 aa9.14□□□□□ -0.95
RTN3P1-201ENST00000536295 ZNF25P17030 456 aaPredicted RBP9.13□□□□□ -0.95
RTN3P1-201ENST00000536295 RPL23P62829 140 aaKnown RBP9.13□□□□□ -0.95
RTN3P1-201ENST00000536295 RIGQ13278 110 aa9.13□□□□□ -0.95
RTN3P1-201ENST00000536295 ADIRFQ15847 76 aa9.13□□□□□ -0.95
RTN3P1-201ENST00000536295 NUP35Q8NFH5 326 aa9.13□□□□□ -0.95
RTN3P1-201ENST00000536295 OR5A1Q8NGJ0 315 aa9.13□□□□□ -0.95
RTN3P1-201ENST00000536295 MRAP2Q96G30 205 aa9.13□□□□□ -0.95
RTN3P1-201ENST00000536295 C9JQL5 133 aa9.12□□□□□ -0.95
RTN3P1-201ENST00000536295 ESDP10768 282 aa9.12□□□□□ -0.95
RTN3P1-201ENST00000536295 XCL1P47992 114 aa9.12□□□□□ -0.95
RTN3P1-201ENST00000536295 FAM74A3Q4VXF1 159 aa9.12□□□□□ -0.95
RTN3P1-201ENST00000536295 CCL25O15444 150 aa9.11□□□□□ -0.95
RTN3P1-201ENST00000536295 POLR2KP53803 58 aaKnown RBP9.11□□□□□ -0.95
RTN3P1-201ENST00000536295 SRSF3P84103 164 aaKnown RBP9.11□□□□□ -0.95
RTN3P1-201ENST00000536295 FOXI1Q12951 378 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms