RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 PHLDA3Q9Y5J5 127 aa4.12□□□□□ -1.75
CHKA-208ENST00000533910 M0R381 172 aa4.11□□□□□ -1.75
CHKA-208ENST00000533910 GIG44P09565 113 aaPredicted RBP4.11□□□□□ -1.75
CHKA-208ENST00000533910 EVI2AP22794 236 aa4.11□□□□□ -1.75
CHKA-208ENST00000533910 FXYD7P58549 80 aa4.11□□□□□ -1.75
CHKA-208ENST00000533910 C11orf72Q8NBR9 251 aa4.11□□□□□ -1.75
CHKA-208ENST00000533910 OR10D4PQ8NGN7 298 aa4.11□□□□□ -1.75
CHKA-208ENST00000533910 MRAP2Q96G30 205 aa4.11□□□□□ -1.75
CHKA-208ENST00000533910 PRELID3AQ96N28 172 aa4.11□□□□□ -1.75
CHKA-208ENST00000533910 WFDC10AQ9H1F0 79 aa4.11□□□□□ -1.75
CHKA-208ENST00000533910 MAP1LC3AQ9H492 121 aa4.11□□□□□ -1.75
CHKA-208ENST00000533910 DPH3P1Q9H4G8 78 aa4.11□□□□□ -1.75
CHKA-208ENST00000533910 MDFICQ9P1T7 246 aa4.11□□□□□ -1.75
CHKA-208ENST00000533910 KIF25-AS1Q9Y6Z4 181 aa4.11□□□□□ -1.75
CHKA-208ENST00000533910 STAB1Q9NY15 2570 aa4.1□□□□□ -1.75
CHKA-208ENST00000533910 NACAE9PAV3 2078 aa4.1□□□□□ -1.75
CHKA-208ENST00000533910 LINC01546A6NGU7 62 aa4.1□□□□□ -1.75
CHKA-208ENST00000533910 SMKR1H3BMG3 65 aa4.1□□□□□ -1.75
CHKA-208ENST00000533910 NCR2O95944 276 aa4.1□□□□□ -1.75
CHKA-208ENST00000533910 NPYP01303 97 aa4.1□□□□□ -1.75
CHKA-208ENST00000533910 CKS2P33552 79 aa4.1□□□□□ -1.75
CHKA-208ENST00000533910 LINC00315P59091 139 aa4.1□□□□□ -1.75
CHKA-208ENST00000533910 PYY3Q5JQD4 70 aa4.1□□□□□ -1.75
CHKA-208ENST00000533910 MORN3Q6PF18 240 aaPredicted RBP4.1□□□□□ -1.75
CHKA-208ENST00000533910 C1orf158Q8N1D5 194 aa4.1□□□□□ -1.75
CHKA-208ENST00000533910 SAMD10Q9BYL1 202 aa4.1□□□□□ -1.75
CHKA-208ENST00000533910 PRO0628Q9UI54 55 aa4.1□□□□□ -1.75
CHKA-208ENST00000533910 TIMM8BQ9Y5J9 83 aaPredicted RBP4.1□□□□□ -1.75
CHKA-208ENST00000533910 FBN1P35555 2871 aaKnown RBP4.1□□□□□ -1.75
CHKA-208ENST00000533910 NOTCH3Q9UM47 2321 aa4.09□□□□□ -1.75
CHKA-208ENST00000533910 IGHV1-24A0A0C4DH33 117 aa4.09□□□□□ -1.75
CHKA-208ENST00000533910 GAS8-AS1O95177 125 aa4.09□□□□□ -1.75
CHKA-208ENST00000533910 JOSD1Q15040 202 aaPredicted RBP4.09□□□□□ -1.75
CHKA-208ENST00000533910 GTSCR1Q86UQ5 136 aa4.09□□□□□ -1.75
CHKA-208ENST00000533910 C14orf178Q8N769 122 aaPredicted RBP4.09□□□□□ -1.75
CHKA-208ENST00000533910 CSNK1G2-AS1Q8NCQ2 148 aa4.09□□□□□ -1.75
CHKA-208ENST00000533910 TMEM158Q8WZ71 300 aa4.09□□□□□ -1.75
CHKA-208ENST00000533910 C14orf144Q96I85 54 aa4.09□□□□□ -1.75
CHKA-208ENST00000533910 LINC01587Q99440 93 aa4.09□□□□□ -1.75
CHKA-208ENST00000533910 C1QTNF4Q9BXJ3 329 aa4.09□□□□□ -1.75
CHKA-208ENST00000533910 EDA2RQ9HAV5 297 aa4.09□□□□□ -1.75
CHKA-208ENST00000533910 XCL2Q9UBD3 114 aa4.09□□□□□ -1.75
CHKA-208ENST00000533910 IGLV2-18A0A075B6J9 118 aa4.08□□□□□ -1.76
CHKA-208ENST00000533910 A0A096LNJ9 63 aa4.08□□□□□ -1.76
CHKA-208ENST00000533910 TRAV26-2A0A0B4J265 109 aa4.08□□□□□ -1.76
CHKA-208ENST00000533910 M0R2P5 195 aa4.08□□□□□ -1.76
CHKA-208ENST00000533910 PPP1R17O96001 155 aa4.08□□□□□ -1.76
CHKA-208ENST00000533910 IGKV2-30P06310 120 aa4.08□□□□□ -1.76
CHKA-208ENST00000533910 CRYGDP07320 174 aa4.08□□□□□ -1.76
CHKA-208ENST00000533910 IFI27P40305 119 aaPredicted RBP4.08□□□□□ -1.76
CHKA-208ENST00000533910 XGP55808 180 aa4.08□□□□□ -1.76
CHKA-208ENST00000533910 UFSP1Q6NVU6 142 aa4.08□□□□□ -1.76
CHKA-208ENST00000533910 ZNF705AQ6ZN79 300 aaPredicted RBP4.08□□□□□ -1.76
CHKA-208ENST00000533910 FA2HQ7L5A8 372 aa4.08□□□□□ -1.76
CHKA-208ENST00000533910 SMIM20Q8N5G0 67 aa4.08□□□□□ -1.76
CHKA-208ENST00000533910 MAPKAPK5-AS1Q8N8E1 139 aa4.08□□□□□ -1.76
CHKA-208ENST00000533910 TMEM263Q8WUH6 116 aaKnown RBP4.08□□□□□ -1.76
CHKA-208ENST00000533910 RASL10AQ92737 203 aa4.08□□□□□ -1.76
CHKA-208ENST00000533910 SIGMAR1Q99720 223 aa4.08□□□□□ -1.76
CHKA-208ENST00000533910 VPS25Q9BRG1 176 aa4.08□□□□□ -1.76
CHKA-208ENST00000533910 NXT2Q9NPJ8 142 aaKnown RBP4.08□□□□□ -1.76
CHKA-208ENST00000533910 IGLV5-45A0A087WSX0 123 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 TRBV6-5A0A0K0K1A5 114 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 PLAC8L1A1L4L8 177 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 LYRM9A8MSI8 78 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 A8MWV9 139 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 OXTP01178 125 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 PRM2P04554 102 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 MGPP08493 103 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 SMIM17P0DL12 118 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 IGLL1P15814 213 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 RPL35AP18077 110 aaKnown RBP4.07□□□□□ -1.76
CHKA-208ENST00000533910 PMVKQ15126 192 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 ZNF876PQ49A33 203 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 C12orf54Q6X4T0 127 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 FAM19A2Q8N3H0 131 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 C3orf56Q8N813 242 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 Q8N8P6 123 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 OR13C6PQ8NH95 151 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 PHLDA1Q8WV24 401 aaPredicted RBP4.07□□□□□ -1.76
CHKA-208ENST00000533910 C16orf74Q96GX8 76 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 C20orf78Q9BR46 151 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 SMIM2Q9BVW6 85 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 JPT2Q9H910 190 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 COL6A5A8TX70 2615 aa4.07□□□□□ -1.76
CHKA-208ENST00000533910 LOC389332A0A1B0GUA5 103 aa4.06□□□□□ -1.76
CHKA-208ENST00000533910 K7EMI3 77 aa4.06□□□□□ -1.76
CHKA-208ENST00000533910 M0QY20 66 aa4.06□□□□□ -1.76
CHKA-208ENST00000533910 HBDP02042 147 aa4.06□□□□□ -1.76
CHKA-208ENST00000533910 C3orf79P0CE67 100 aa4.06□□□□□ -1.76
CHKA-208ENST00000533910 HTN1P15515 57 aa4.06□□□□□ -1.76
CHKA-208ENST00000533910 AZU1P20160 251 aa4.06□□□□□ -1.76
CHKA-208ENST00000533910 NANOS2P60321 138 aaKnown RBP4.06□□□□□ -1.76
CHKA-208ENST00000533910 EGFEM1PQ0D2K5 195 aa4.06□□□□□ -1.76
CHKA-208ENST00000533910 DAZ2Q13117 558 aaKnown RBP4.06□□□□□ -1.76
CHKA-208ENST00000533910 LAGE3Q14657 143 aa4.06□□□□□ -1.76
CHKA-208ENST00000533910 PMCHL1Q16048 86 aa4.06□□□□□ -1.76
CHKA-208ENST00000533910 LGALS9BQ3B8N2 356 aa4.06□□□□□ -1.76
CHKA-208ENST00000533910 Q8N976 141 aa4.06□□□□□ -1.76
CHKA-208ENST00000533910 RPL39LQ96EH5 51 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms