RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 PNRC1Q12796 327 aaPredicted RBP8.19□□□□□ -1.1
CAPRIN1-213ENST00000533562 PRR27Q6MZM9 219 aa8.19□□□□□ -1.1
CAPRIN1-213ENST00000533562 HIST3H2BBQ8N257 126 aa8.19□□□□□ -1.1
CAPRIN1-213ENST00000533562 OR10D4PQ8NGN7 298 aa8.19□□□□□ -1.1
CAPRIN1-213ENST00000533562 BTF3L4Q96K17 158 aa8.19□□□□□ -1.1
CAPRIN1-213ENST00000533562 SNAI2O43623 268 aa8.18□□□□□ -1.1
CAPRIN1-213ENST00000533562 SMIM17P0DL12 118 aa8.18□□□□□ -1.1
CAPRIN1-213ENST00000533562 YPEL4Q96NS1 127 aa8.18□□□□□ -1.1
CAPRIN1-213ENST00000533562 MANBALQ9NQG1 85 aa8.18□□□□□ -1.1
CAPRIN1-213ENST00000533562 DNAH8Q96JB1 4490 aa8.17□□□□□ -1.1
CAPRIN1-213ENST00000533562 TRAV1-1A0A0B4J248 108 aa8.17□□□□□ -1.1
CAPRIN1-213ENST00000533562 MUC21A0A0G2JKD1 596 aa8.17□□□□□ -1.1
CAPRIN1-213ENST00000533562 MUC21A0A140T8X8 626 aa8.17□□□□□ -1.1
CAPRIN1-213ENST00000533562 SRSF3P84103 164 aaKnown RBP8.17□□□□□ -1.1
CAPRIN1-213ENST00000533562 TMEM97Q5BJF2 176 aa8.17□□□□□ -1.1
CAPRIN1-213ENST00000533562 Q6ZSA8 131 aa8.17□□□□□ -1.1
CAPRIN1-213ENST00000533562 NEXN-AS1Q8NBZ9 246 aa8.17□□□□□ -1.1
CAPRIN1-213ENST00000533562 DAZAP1Q96EP5 407 aaKnown RBP8.17□□□□□ -1.1
CAPRIN1-213ENST00000533562 DNAJC30Q96LL9 226 aa8.17□□□□□ -1.1
CAPRIN1-213ENST00000533562 PACRGQ96M98 296 aaPredicted RBP8.17□□□□□ -1.1
CAPRIN1-213ENST00000533562 GNG13Q9P2W3 67 aa8.17□□□□□ -1.1
CAPRIN1-213ENST00000533562 CRPP02741 224 aa8.16□□□□□ -1.1
CAPRIN1-213ENST00000533562 PLA2G1BP04054 148 aaKnown RBP8.16□□□□□ -1.1
CAPRIN1-213ENST00000533562 IQCJQ1A5X6 159 aa8.16□□□□□ -1.1
CAPRIN1-213ENST00000533562 CHCHD5Q9BSY4 110 aa8.16□□□□□ -1.1
CAPRIN1-213ENST00000533562 C1orf43Q9BWL3 253 aa8.16□□□□□ -1.1
CAPRIN1-213ENST00000533562 CTDSP1Q9GZU7 261 aa8.16□□□□□ -1.1
CAPRIN1-213ENST00000533562 EIF5A2Q9GZV4 153 aaKnown RBP8.16□□□□□ -1.1
CAPRIN1-213ENST00000533562 DLEU1O43261 78 aa8.15□□□□□ -1.1
CAPRIN1-213ENST00000533562 RPS20P60866 119 aaKnown RBP8.15□□□□□ -1.1
CAPRIN1-213ENST00000533562 CCL20P78556 96 aa8.15□□□□□ -1.1
CAPRIN1-213ENST00000533562 C14orf177Q52M58 125 aa8.15□□□□□ -1.1
CAPRIN1-213ENST00000533562 COA6Q5JTJ3 125 aaKnown RBP8.15□□□□□ -1.1
CAPRIN1-213ENST00000533562 C11orf52Q96A22 123 aa8.15□□□□□ -1.1
CAPRIN1-213ENST00000533562 AP1S3Q96PC3 154 aa8.15□□□□□ -1.1
CAPRIN1-213ENST00000533562 VAX2Q9UIW0 290 aa8.15□□□□□ -1.1
CAPRIN1-213ENST00000533562 XKRY2A2RUG3 117 aa8.14□□□□□ -1.11
CAPRIN1-213ENST00000533562 ANGP03950 147 aaKnown RBP8.14□□□□□ -1.11
CAPRIN1-213ENST00000533562 ENHOQ6UWT2 76 aa8.14□□□□□ -1.11
CAPRIN1-213ENST00000533562 SMIM12Q96EX1 92 aa8.14□□□□□ -1.11
CAPRIN1-213ENST00000533562 DERL1Q9BUN8 251 aa8.14□□□□□ -1.11
CAPRIN1-213ENST00000533562 TPPP3Q9BW30 176 aa8.14□□□□□ -1.11
CAPRIN1-213ENST00000533562 KIF25-AS1Q9Y6Z4 181 aa8.14□□□□□ -1.11
CAPRIN1-213ENST00000533562 TRBV24-1A0A075B6N3 115 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 H7C1H1 209 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 PDE6DO43924 150 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 HIST1H2BKO60814 126 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 HIST1H2BJP06899 126 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 HIST1H2BOP23527 126 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 HIST1H2BBP33778 126 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 HIST1H2BDP58876 126 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 HIST1H2BCP62807 126 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 MIAQ16674 131 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 HIST2H2BEQ16778 126 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 LINC01620Q4KN68 170 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 MPV17L2Q567V2 206 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 CENPWQ5EE01 88 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 FER1L6-AS1Q8NA97 138 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 OR2D3Q8NGH3 330 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 HIST1H2BHQ93079 126 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 TMEM18Q96B42 140 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 HIST1H2BNQ99877 126 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 HIST1H2BMQ99879 126 aa8.13□□□□□ -1.11
CAPRIN1-213ENST00000533562 TRBV25-1A0A075B6N4 114 aa8.12□□□□□ -1.11
CAPRIN1-213ENST00000533562 IFITM10A6NMD0 228 aa8.12□□□□□ -1.11
CAPRIN1-213ENST00000533562 F2Z2F3 143 aa8.12□□□□□ -1.11
CAPRIN1-213ENST00000533562 IFNA1P01562 189 aa8.12□□□□□ -1.11
CAPRIN1-213ENST00000533562 TAGLN2P37802 199 aaKnown RBP8.12□□□□□ -1.11
CAPRIN1-213ENST00000533562 GNG4P50150 75 aa8.12□□□□□ -1.11
CAPRIN1-213ENST00000533562 CACNG7P62955 275 aa8.12□□□□□ -1.11
CAPRIN1-213ENST00000533562 MEF2BQ02080 365 aaPredicted RBP8.12□□□□□ -1.11
CAPRIN1-213ENST00000533562 TMEM241Q24JQ0 296 aa8.12□□□□□ -1.11
CAPRIN1-213ENST00000533562 SVIPQ8NHG7 77 aa8.12□□□□□ -1.11
CAPRIN1-213ENST00000533562 ISOC2Q96AB3 205 aa8.12□□□□□ -1.11
CAPRIN1-213ENST00000533562 CHAC1Q9BUX1 264 aa8.12□□□□□ -1.11
CAPRIN1-213ENST00000533562 M0QY20 66 aa8.11□□□□□ -1.11
CAPRIN1-213ENST00000533562 IGLV2-8P01709 118 aa8.11□□□□□ -1.11
CAPRIN1-213ENST00000533562 P01737 135 aa8.11□□□□□ -1.11
CAPRIN1-213ENST00000533562 IGLC6P0CF74 106 aa8.11□□□□□ -1.11
CAPRIN1-213ENST00000533562 GZMBP10144 247 aa8.11□□□□□ -1.11
CAPRIN1-213ENST00000533562 FABP4P15090 132 aa8.11□□□□□ -1.11
CAPRIN1-213ENST00000533562 NTM-AS1Q6ZSK4 140 aa8.11□□□□□ -1.11
CAPRIN1-213ENST00000533562 IGHV1-24A0A0C4DH33 117 aa8.1□□□□□ -1.11
CAPRIN1-213ENST00000533562 C19orf71A6NCJ1 209 aa8.1□□□□□ -1.11
CAPRIN1-213ENST00000533562 PHOX2AO14813 284 aa8.1□□□□□ -1.11
CAPRIN1-213ENST00000533562 MGPP08493 103 aa8.1□□□□□ -1.11
CAPRIN1-213ENST00000533562 ZNF25P17030 456 aaPredicted RBP8.1□□□□□ -1.11
CAPRIN1-213ENST00000533562 RBX1P62877 108 aa8.1□□□□□ -1.11
CAPRIN1-213ENST00000533562 SCXQ7RTU7 201 aa8.1□□□□□ -1.11
CAPRIN1-213ENST00000533562 DEFB104AQ8WTQ1 72 aa8.1□□□□□ -1.11
CAPRIN1-213ENST00000533562 HIST1H2BLQ99880 126 aa8.1□□□□□ -1.11
CAPRIN1-213ENST00000533562 HLA-DQA1P01909 254 aa8.09□□□□□ -1.11
CAPRIN1-213ENST00000533562 TRGC1P0CF51 173 aa8.09□□□□□ -1.11
CAPRIN1-213ENST00000533562 GAGE6Q13070 117 aa8.09□□□□□ -1.11
CAPRIN1-213ENST00000533562 LINC00269Q8N2A0 174 aa8.09□□□□□ -1.11
CAPRIN1-213ENST00000533562 PRR34Q9NV39 138 aa8.09□□□□□ -1.11
CAPRIN1-213ENST00000533562 C9JQL5 133 aa8.08□□□□□ -1.12
CAPRIN1-213ENST00000533562 USP17L23D6RBM5 183 aa8.08□□□□□ -1.12
CAPRIN1-213ENST00000533562 BCL2P10415 239 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms