RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 TMEM18Q96B42 140 aa11.16□□□□□ -0.62
TRIM3-213ENST00000533309 A0A0J9YY99 117 aa11.15□□□□□ -0.62
TRIM3-213ENST00000533309 GYPEP15421 78 aa11.15□□□□□ -0.62
TRIM3-213ENST00000533309 PACRGQ96M98 296 aaPredicted RBP11.15□□□□□ -0.62
TRIM3-213ENST00000533309 ORMDL2Q53FV1 153 aa11.14□□□□□ -0.63
TRIM3-213ENST00000533309 HBDP02042 147 aa11.13□□□□□ -0.63
TRIM3-213ENST00000533309 FCER1GP30273 86 aa11.13□□□□□ -0.63
TRIM3-213ENST00000533309 DAZ4Q86SG3 579 aaKnown RBP11.13□□□□□ -0.63
TRIM3-213ENST00000533309 DAZ3Q9NR90 486 aaKnown RBP11.13□□□□□ -0.63
TRIM3-213ENST00000533309 NUDT3O95989 172 aa11.12□□□□□ -0.63
TRIM3-213ENST00000533309 LINC00173Q6ZV60 143 aa11.12□□□□□ -0.63
TRIM3-213ENST00000533309 DEFB131BA0A096LNP1 70 aa11.11□□□□□ -0.63
TRIM3-213ENST00000533309 BTF3P20290 206 aaKnown RBP11.11□□□□□ -0.63
TRIM3-213ENST00000533309 COTL1Q14019 142 aa11.11□□□□□ -0.63
TRIM3-213ENST00000533309 NTM-AS1Q6ZSK4 140 aa11.11□□□□□ -0.63
TRIM3-213ENST00000533309 DYNC2H1Q8NCM8 4307 aaKnown RBP11.1□□□□□ -0.63
TRIM3-213ENST00000533309 LEPROTL1O95214 131 aa11.1□□□□□ -0.63
TRIM3-213ENST00000533309 OR10D4PQ8NGN7 298 aa11.1□□□□□ -0.63
TRIM3-213ENST00000533309 CHCHD7Q9BUK0 85 aa11.1□□□□□ -0.63
TRIM3-213ENST00000533309 DNAH7Q8WXX0 4024 aa11.1□□□□□ -0.63
TRIM3-213ENST00000533309 C2orf66Q6UXQ4 117 aa11.09□□□□□ -0.63
TRIM3-213ENST00000533309 TOMM6Q96B49 74 aa11.09□□□□□ -0.63
TRIM3-213ENST00000533309 TRAV10A0A0B4J240 114 aa11.09□□□□□ -0.63
TRIM3-213ENST00000533309 H3BNG1 76 aa11.09□□□□□ -0.63
TRIM3-213ENST00000533309 RPL39P62891 51 aaKnown RBP11.09□□□□□ -0.63
TRIM3-213ENST00000533309 C20orf203Q8NBC4 194 aa11.09□□□□□ -0.63
TRIM3-213ENST00000533309 ATP6V0E2Q8NHE4 81 aa11.09□□□□□ -0.63
TRIM3-213ENST00000533309 GTSF1LQ9H1H1 148 aa11.09□□□□□ -0.63
TRIM3-213ENST00000533309 A0A096LPF7 62 aa11.08□□□□□ -0.64
TRIM3-213ENST00000533309 ICOSQ9Y6W8 199 aa11.08□□□□□ -0.64
TRIM3-213ENST00000533309 TGP01266 2768 aa11.07□□□□□ -0.64
TRIM3-213ENST00000533309 AKR1D1P51857 326 aa11.07□□□□□ -0.64
TRIM3-213ENST00000533309 MRPL23Q16540 153 aaKnown RBP11.07□□□□□ -0.64
TRIM3-213ENST00000533309 CYSLTR1Q9Y271 337 aa11.07□□□□□ -0.64
TRIM3-213ENST00000533309 HSPB8Q9UJY1 196 aa11.06□□□□□ -0.64
TRIM3-213ENST00000533309 TRBV6-8A0A0A6YYG3 113 aa11.06□□□□□ -0.64
TRIM3-213ENST00000533309 C3orf79P0CE67 100 aa11.06□□□□□ -0.64
TRIM3-213ENST00000533309 CSMD3Q7Z407 3707 aa11.05□□□□□ -0.64
TRIM3-213ENST00000533309 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.05□□□□□ -0.64
TRIM3-213ENST00000533309 IGKV2-29A2NJV5 120 aaPredicted RBP11.05□□□□□ -0.64
TRIM3-213ENST00000533309 G0S2P27469 103 aa11.05□□□□□ -0.64
TRIM3-213ENST00000533309 IGIPA6NJ69 53 aa11.04□□□□□ -0.64
TRIM3-213ENST00000533309 KRTDAPP60985 99 aa11.04□□□□□ -0.64
TRIM3-213ENST00000533309 IFI27L1Q96BM0 104 aa11.04□□□□□ -0.64
TRIM3-213ENST00000533309 TRBV25-1A0A075B6N4 114 aa11.03□□□□□ -0.64
TRIM3-213ENST00000533309 LINC01549A6NIU2 74 aa11.03□□□□□ -0.64
TRIM3-213ENST00000533309 TMEM97Q5BJF2 176 aa11.03□□□□□ -0.64
TRIM3-213ENST00000533309 ERASQ7Z444 233 aa11.03□□□□□ -0.64
TRIM3-213ENST00000533309 SH2D6Q7Z4S9 175 aa11.03□□□□□ -0.64
TRIM3-213ENST00000533309 SCGB3A1Q96QR1 104 aa11.03□□□□□ -0.64
TRIM3-213ENST00000533309 ATP5LO75964 103 aa11.02□□□□□ -0.64
TRIM3-213ENST00000533309 SPATA12Q7Z6I5 190 aa11.02□□□□□ -0.64
TRIM3-213ENST00000533309 TMEM243Q9BU79 118 aa11.02□□□□□ -0.64
TRIM3-213ENST00000533309 SYS1-DBNDD2H3BUS1 97 aa11.02□□□□□ -0.65
TRIM3-213ENST00000533309 FAM104AQ969W3 186 aa11.02□□□□□ -0.65
TRIM3-213ENST00000533309 TIMM17AQ99595 171 aa11.02□□□□□ -0.65
TRIM3-213ENST00000533309 MAP1LC3CQ9BXW4 147 aa11.02□□□□□ -0.65
TRIM3-213ENST00000533309 UBE2D4Q9Y2X8 147 aa11.02□□□□□ -0.65
TRIM3-213ENST00000533309 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.01□□□□□ -0.65
TRIM3-213ENST00000533309 PYY3Q5JQD4 70 aa11.01□□□□□ -0.65
TRIM3-213ENST00000533309 CEMP1Q6PRD7 247 aaPredicted RBP11.01□□□□□ -0.65
TRIM3-213ENST00000533309 Q8N976 141 aa11.01□□□□□ -0.65
TRIM3-213ENST00000533309 PYGO1Q9Y3Y4 419 aa11.01□□□□□ -0.65
TRIM3-213ENST00000533309 OPRPNQ99935 248 aaPredicted RBP11□□□□□ -0.65
TRIM3-213ENST00000533309 JOSD1Q15040 202 aaPredicted RBP10.99□□□□□ -0.65
TRIM3-213ENST00000533309 LYPD5Q6UWN5 251 aa10.99□□□□□ -0.65
TRIM3-213ENST00000533309 MRPL52Q86TS9 123 aaKnown RBP10.99□□□□□ -0.65
TRIM3-213ENST00000533309 TMEM141Q96I45 108 aa10.99□□□□□ -0.65
TRIM3-213ENST00000533309 TIMM21Q9BVV7 248 aa10.99□□□□□ -0.65
TRIM3-213ENST00000533309 SPANXA1Q9NS26 97 aa10.99□□□□□ -0.65
TRIM3-213ENST00000533309 IGLV4-3A0A075B6K6 122 aa10.98□□□□□ -0.65
TRIM3-213ENST00000533309 FGF6P10767 208 aa10.98□□□□□ -0.65
TRIM3-213ENST00000533309 TIRAPP58753 221 aa10.98□□□□□ -0.65
TRIM3-213ENST00000533309 C15orf53Q8NAA6 179 aa10.98□□□□□ -0.65
TRIM3-213ENST00000533309 BAALCQ8WXS3 180 aa10.98□□□□□ -0.65
TRIM3-213ENST00000533309 PLECQ15149 4684 aaKnown RBP10.98□□□□□ -0.65
TRIM3-213ENST00000533309 H0Y8G0 127 aa10.98□□□□□ -0.65
TRIM3-213ENST00000533309 H7C423 109 aa10.98□□□□□ -0.65
TRIM3-213ENST00000533309 GAGE6Q13070 117 aa10.98□□□□□ -0.65
TRIM3-213ENST00000533309 LELP1Q5T871 98 aa10.98□□□□□ -0.65
TRIM3-213ENST00000533309 PET117Q6UWS5 81 aa10.98□□□□□ -0.65
TRIM3-213ENST00000533309 CHCHD5Q9BSY4 110 aa10.98□□□□□ -0.65
TRIM3-213ENST00000533309 STARD9Q9P2P6 4700 aa10.97□□□□□ -0.65
TRIM3-213ENST00000533309 IGLL5B9A064 214 aa10.97□□□□□ -0.65
TRIM3-213ENST00000533309 UBE2L6O14933 153 aa10.97□□□□□ -0.65
TRIM3-213ENST00000533309 ZC2HC1BQ5TFG8 222 aa10.97□□□□□ -0.65
TRIM3-213ENST00000533309 Q6ZN92 141 aa10.97□□□□□ -0.65
TRIM3-213ENST00000533309 TENM2Q9NT68 2774 aa10.96□□□□□ -0.65
TRIM3-213ENST00000533309 PRSS1P07477 247 aa10.96□□□□□ -0.65
TRIM3-213ENST00000533309 NPSP0C0P6 89 aa10.96□□□□□ -0.65
TRIM3-213ENST00000533309 ESRGQ1W209 222 aa10.96□□□□□ -0.65
TRIM3-213ENST00000533309 LINC01545Q5VT33 79 aa10.96□□□□□ -0.65
TRIM3-213ENST00000533309 Q6ZUT4 128 aa10.96□□□□□ -0.65
TRIM3-213ENST00000533309 CSDC2Q9Y534 153 aaKnown RBP10.96□□□□□ -0.65
TRIM3-213ENST00000533309 ODF1Q14990 250 aa10.95□□□□□ -0.66
TRIM3-213ENST00000533309 CDPF1Q6NVV7 123 aa10.95□□□□□ -0.66
TRIM3-213ENST00000533309 SCGB1D1O95968 90 aa10.95□□□□□ -0.66
TRIM3-213ENST00000533309 MRPS36P82909 103 aaKnown RBP10.95□□□□□ -0.66
TRIM3-213ENST00000533309 PMCHL2Q9BQD1 86 aa10.95□□□□□ -0.66
TRIM3-213ENST00000533309 TRAV12-1A0A0B4J245 112 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 188.8 ms