RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 DEFB121Q5J5C9 76 aa9.32□□□□□ -0.92
BDNF-218ENST00000533246 CARD19Q96LW7 228 aa9.32□□□□□ -0.92
BDNF-218ENST00000533246 ATG2AQ2TAZ0 1938 aa9.32□□□□□ -0.92
BDNF-218ENST00000533246 HECTD1Q9ULT8 2610 aa9.31□□□□□ -0.92
BDNF-218ENST00000533246 CCL24O00175 119 aa9.31□□□□□ -0.92
BDNF-218ENST00000533246 IGHG2P01859 326 aa9.31□□□□□ -0.92
BDNF-218ENST00000533246 TMEM86BQ8N661 226 aa9.31□□□□□ -0.92
BDNF-218ENST00000533246 OPRPNQ99935 248 aaPredicted RBP9.31□□□□□ -0.92
BDNF-218ENST00000533246 RBMY1BA6NDE4 496 aaKnown RBP9.31□□□□□ -0.92
BDNF-218ENST00000533246 RBMY1EA6NEQ0 496 aaKnown RBP9.31□□□□□ -0.92
BDNF-218ENST00000533246 RBMY1DP0C7P1 496 aaKnown RBP9.31□□□□□ -0.92
BDNF-218ENST00000533246 RBMY1A1P0DJD3 496 aaKnown RBP9.31□□□□□ -0.92
BDNF-218ENST00000533246 RBMY1CP0DJD4 496 aa9.31□□□□□ -0.92
BDNF-218ENST00000533246 HIST2H2BCQ6DN03 193 aa9.31□□□□□ -0.92
BDNF-218ENST00000533246 ZNF493Q6ZR52 646 aa9.31□□□□□ -0.92
BDNF-218ENST00000533246 LENEPQ9Y5L5 61 aa9.31□□□□□ -0.92
BDNF-218ENST00000533246 TMEM61Q8N0U2 210 aa9.3□□□□□ -0.92
BDNF-218ENST00000533246 ODF3BA8MYP8 253 aa9.3□□□□□ -0.92
BDNF-218ENST00000533246 CRPP02741 224 aa9.3□□□□□ -0.92
BDNF-218ENST00000533246 CRYGBP07316 175 aa9.3□□□□□ -0.92
BDNF-218ENST00000533246 TMEM141Q96I45 108 aa9.3□□□□□ -0.92
BDNF-218ENST00000533246 ATRQ13535 2644 aa9.3□□□□□ -0.92
BDNF-218ENST00000533246 IGKV2D-26A0A0A0MRZ7 120 aa9.3□□□□□ -0.92
BDNF-218ENST00000533246 DEFB113Q30KQ7 82 aa9.3□□□□□ -0.92
BDNF-218ENST00000533246 LINC01620Q4KN68 170 aa9.3□□□□□ -0.92
BDNF-218ENST00000533246 F8WDY8 70 aa9.29□□□□□ -0.92
BDNF-218ENST00000533246 MRPL55Q7Z7F7 128 aaKnown RBP9.29□□□□□ -0.92
BDNF-218ENST00000533246 A0A0J9YY99 117 aa9.29□□□□□ -0.92
BDNF-218ENST00000533246 PRO0628Q9UI54 55 aa9.29□□□□□ -0.92
BDNF-218ENST00000533246 H3BUA1 57 aa9.28□□□□□ -0.92
BDNF-218ENST00000533246 IGHG4P01861 327 aa9.28□□□□□ -0.92
BDNF-218ENST00000533246 C9orf47Q6ZRZ4 202 aa9.28□□□□□ -0.92
BDNF-218ENST00000533246 J3QKU1 62 aa9.28□□□□□ -0.92
BDNF-218ENST00000533246 LY6LH3BQJ8 138 aa9.28□□□□□ -0.92
BDNF-218ENST00000533246 Q6ZS46 218 aa9.28□□□□□ -0.92
BDNF-218ENST00000533246 CFC1BP0CG36 223 aa9.28□□□□□ -0.92
BDNF-218ENST00000533246 CFC1P0CG37 223 aa9.28□□□□□ -0.92
BDNF-218ENST00000533246 CEMP1Q6PRD7 247 aaPredicted RBP9.28□□□□□ -0.92
BDNF-218ENST00000533246 CMC4P56277 68 aaPredicted RBP9.27□□□□□ -0.93
BDNF-218ENST00000533246 DAND5Q8N907 189 aa9.27□□□□□ -0.93
BDNF-218ENST00000533246 BAALCQ8WXS3 180 aa9.27□□□□□ -0.93
BDNF-218ENST00000533246 F8P00451 2351 aa9.27□□□□□ -0.93
BDNF-218ENST00000533246 IGKV3D-7A0A0C4DH55 119 aa9.27□□□□□ -0.93
BDNF-218ENST00000533246 C5orf38Q86SI9 138 aa9.27□□□□□ -0.93
BDNF-218ENST00000533246 SMAD5-AS1Q9Y6J3 95 aa9.27□□□□□ -0.93
BDNF-218ENST00000533246 P0DMU3 169 aa9.26□□□□□ -0.93
BDNF-218ENST00000533246 FAM231AP0DMU4 169 aa9.26□□□□□ -0.93
BDNF-218ENST00000533246 FAM231CP0DMU5 169 aa9.26□□□□□ -0.93
BDNF-218ENST00000533246 Q6Q795 121 aa9.26□□□□□ -0.93
BDNF-218ENST00000533246 C20orf173Q96LM9 149 aa9.26□□□□□ -0.93
BDNF-218ENST00000533246 GAS8-AS1O95177 125 aa9.26□□□□□ -0.93
BDNF-218ENST00000533246 SPEGQ15772 3267 aa9.26□□□□□ -0.93
BDNF-218ENST00000533246 NHLRC4P0CG21 123 aaPredicted RBP9.26□□□□□ -0.93
BDNF-218ENST00000533246 A0A1W2PPR1 153 aa9.25□□□□□ -0.93
BDNF-218ENST00000533246 DEFB4AO15263 64 aa9.25□□□□□ -0.93
BDNF-218ENST00000533246 A6NDX4 124 aa9.25□□□□□ -0.93
BDNF-218ENST00000533246 LEPROTO15243 131 aa9.25□□□□□ -0.93
BDNF-218ENST00000533246 DAD1P61803 113 aa9.25□□□□□ -0.93
BDNF-218ENST00000533246 RBMY1FQ15415 496 aaKnown RBP9.25□□□□□ -0.93
BDNF-218ENST00000533246 C11orf86A6NJI1 115 aa9.25□□□□□ -0.93
BDNF-218ENST00000533246 TMEM258P61165 79 aa9.25□□□□□ -0.93
BDNF-218ENST00000533246 COX7CP15954 63 aa9.24□□□□□ -0.93
BDNF-218ENST00000533246 MYCNOSP40205 109 aa9.24□□□□□ -0.93
BDNF-218ENST00000533246 IGLV2-11P01706 119 aa9.24□□□□□ -0.93
BDNF-218ENST00000533246 PRM2P04554 102 aa9.24□□□□□ -0.93
BDNF-218ENST00000533246 XCL1P47992 114 aa9.24□□□□□ -0.93
BDNF-218ENST00000533246 SS18Q15532 418 aa9.23□□□□□ -0.93
BDNF-218ENST00000533246 GPHB5Q86YW7 130 aa9.23□□□□□ -0.93
BDNF-218ENST00000533246 KIR2DL5BQ8NHK3 375 aa9.23□□□□□ -0.93
BDNF-218ENST00000533246 Q9H8V8 135 aa9.23□□□□□ -0.93
BDNF-218ENST00000533246 MAST4O15021 2626 aa9.23□□□□□ -0.93
BDNF-218ENST00000533246 CPAMD8Q8IZJ3 1885 aa9.23□□□□□ -0.93
BDNF-218ENST00000533246 ANGP03950 147 aaKnown RBP9.23□□□□□ -0.93
BDNF-218ENST00000533246 C11orf71Q6IPW1 123 aa9.23□□□□□ -0.93
BDNF-218ENST00000533246 MPLKIPQ8TAP9 179 aa9.23□□□□□ -0.93
BDNF-218ENST00000533246 ZFAND3Q9H8U3 227 aa9.23□□□□□ -0.93
BDNF-218ENST00000533246 MGAM2Q2M2H8 2515 aa9.23□□□□□ -0.93
BDNF-218ENST00000533246 IGLV10-54A0A075B6I4 117 aa9.22□□□□□ -0.93
BDNF-218ENST00000533246 MAPKAPK5-AS1Q8N8E1 139 aa9.22□□□□□ -0.93
BDNF-218ENST00000533246 A0A0J9YX75 114 aa9.22□□□□□ -0.93
BDNF-218ENST00000533246 MRPS12O15235 138 aaKnown RBP9.22□□□□□ -0.93
BDNF-218ENST00000533246 LINC00526Q96FQ7 95 aa9.22□□□□□ -0.93
BDNF-218ENST00000533246 MUC4Q99102 2169 aa9.22□□□□□ -0.93
BDNF-218ENST00000533246 C11orf21Q9P2W6 132 aa9.21□□□□□ -0.93
BDNF-218ENST00000533246 LAMTOR3Q9UHA4 124 aa9.21□□□□□ -0.93
BDNF-218ENST00000533246 EXPH5Q8NEV8 1989 aa9.21□□□□□ -0.93
BDNF-218ENST00000533246 ATP5G1P05496 136 aa9.21□□□□□ -0.93
BDNF-218ENST00000533246 ACYP1P07311 99 aa9.21□□□□□ -0.94
BDNF-218ENST00000533246 LINC00643Q86TS7 51 aa9.21□□□□□ -0.94
BDNF-218ENST00000533246 C20orf197Q8N268 126 aa9.21□□□□□ -0.94
BDNF-218ENST00000533246 TRBV10-2A0A0K0K1G8 114 aa9.21□□□□□ -0.94
BDNF-218ENST00000533246 URB1-AS1Q96HZ7 61 aa9.21□□□□□ -0.94
BDNF-218ENST00000533246 K7EMT4 169 aa9.2□□□□□ -0.94
BDNF-218ENST00000533246 RHOHQ15669 191 aa9.2□□□□□ -0.94
BDNF-218ENST00000533246 DSPP15924 2871 aaKnown RBP9.2□□□□□ -0.94
BDNF-218ENST00000533246 TET2Q6N021 2002 aaPredicted RBP9.2□□□□□ -0.94
BDNF-218ENST00000533246 EBI3Q14213 229 aa9.2□□□□□ -0.94
BDNF-218ENST00000533246 NDUFA11Q86Y39 141 aa9.2□□□□□ -0.94
BDNF-218ENST00000533246 MUSTN1Q8IVN3 82 aa9.2□□□□□ -0.94
BDNF-218ENST00000533246 TNFRSF13BO14836 293 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms