RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 CCDC32Q9BV29 185 aa4.71□□□□□ -1.66
NXF1-212ENST00000531872 FSIP2Q5CZC0 6907 aa4.71□□□□□ -1.66
NXF1-212ENST00000531872 IGLV1-50A0A075B6I6 118 aa4.7□□□□□ -1.66
NXF1-212ENST00000531872 IGKV3OR2-268A0A0C4DH90 116 aa4.7□□□□□ -1.66
NXF1-212ENST00000531872 UBE2L6O14933 153 aa4.7□□□□□ -1.66
NXF1-212ENST00000531872 MT-ND6P03923 174 aa4.7□□□□□ -1.66
NXF1-212ENST00000531872 NKX2-5P52952 324 aaPredicted RBP4.7□□□□□ -1.66
NXF1-212ENST00000531872 C1orf137Q5JT78 98 aa4.7□□□□□ -1.66
NXF1-212ENST00000531872 SUMO4Q6EEV6 95 aa4.7□□□□□ -1.66
NXF1-212ENST00000531872 DIRC1Q969H9 104 aa4.7□□□□□ -1.66
NXF1-212ENST00000531872 IGHV1-58A0A0C4DH39 117 aa4.69□□□□□ -1.66
NXF1-212ENST00000531872 CTXND1A0A1B0GTU2 59 aa4.69□□□□□ -1.66
NXF1-212ENST00000531872 IGLV7-43P04211 117 aa4.69□□□□□ -1.66
NXF1-212ENST00000531872 KRTAP1-4P0C5Y4 121 aa4.69□□□□□ -1.66
NXF1-212ENST00000531872 AMTP48728 403 aa4.69□□□□□ -1.66
NXF1-212ENST00000531872 DEFA3P59666 94 aa4.69□□□□□ -1.66
NXF1-212ENST00000531872 SSTP61278 116 aa4.69□□□□□ -1.66
NXF1-212ENST00000531872 RASL11AQ6T310 242 aa4.69□□□□□ -1.66
NXF1-212ENST00000531872 LINC00526Q96FQ7 95 aa4.69□□□□□ -1.66
NXF1-212ENST00000531872 TCEAL7Q9BRU2 100 aa4.69□□□□□ -1.66
NXF1-212ENST00000531872 MLST8Q9BVC4 326 aa4.69□□□□□ -1.66
NXF1-212ENST00000531872 LOC107984640A0A0U1RRK4 108 aa4.68□□□□□ -1.66
NXF1-212ENST00000531872 INMT-MINDY4F8WBC2 141 aa4.68□□□□□ -1.66
NXF1-212ENST00000531872 H0Y9J4 135 aa4.68□□□□□ -1.66
NXF1-212ENST00000531872 MGPP08493 103 aa4.68□□□□□ -1.66
NXF1-212ENST00000531872 FHITP49789 147 aa4.68□□□□□ -1.66
NXF1-212ENST00000531872 SYCNQ0VAF6 134 aa4.68□□□□□ -1.66
NXF1-212ENST00000531872 GAGE2BQ13066 116 aa4.68□□□□□ -1.66
NXF1-212ENST00000531872 COTL1Q14019 142 aa4.68□□□□□ -1.66
NXF1-212ENST00000531872 C9orf116Q5BN46 136 aaPredicted RBP4.68□□□□□ -1.66
NXF1-212ENST00000531872 ENKURQ8TC29 256 aa4.68□□□□□ -1.66
NXF1-212ENST00000531872 NIT2Q9NQR4 276 aa4.68□□□□□ -1.66
NXF1-212ENST00000531872 AKR1C3P42330 323 aa4.67□□□□□ -1.66
NXF1-212ENST00000531872 PHF5AQ7RTV0 110 aaKnown RBP4.67□□□□□ -1.66
NXF1-212ENST00000531872 CRCT1Q9UGL9 99 aa4.67□□□□□ -1.66
NXF1-212ENST00000531872 H3BS24 57 aa4.66□□□□□ -1.66
NXF1-212ENST00000531872 H7C423 109 aa4.66□□□□□ -1.66
NXF1-212ENST00000531872 ZNF561-AS1K7EIQ3 104 aa4.66□□□□□ -1.66
NXF1-212ENST00000531872 SSNA1O43805 119 aa4.66□□□□□ -1.66
NXF1-212ENST00000531872 S100A9P06702 114 aaKnown RBP4.66□□□□□ -1.66
NXF1-212ENST00000531872 IGLC6P0CF74 106 aa4.66□□□□□ -1.66
NXF1-212ENST00000531872 FGF6P10767 208 aa4.66□□□□□ -1.66
NXF1-212ENST00000531872 XCL1P47992 114 aa4.66□□□□□ -1.66
NXF1-212ENST00000531872 OR5A1Q8NGJ0 315 aa4.66□□□□□ -1.66
NXF1-212ENST00000531872 MARVELD1Q9BSK0 173 aa4.66□□□□□ -1.66
NXF1-212ENST00000531872 TRAV1-1A0A0B4J248 108 aa4.65□□□□□ -1.67
NXF1-212ENST00000531872 LINC00959A0A1B0GUT2 108 aa4.65□□□□□ -1.67
NXF1-212ENST00000531872 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.65□□□□□ -1.67
NXF1-212ENST00000531872 CCL25O15444 150 aa4.65□□□□□ -1.67
NXF1-212ENST00000531872 BCL2P10415 239 aa4.65□□□□□ -1.67
NXF1-212ENST00000531872 NTF3P20783 257 aa4.65□□□□□ -1.67
NXF1-212ENST00000531872 RPL13AP40429 203 aaKnown RBP4.65□□□□□ -1.67
NXF1-212ENST00000531872 CAMPP49913 170 aa4.65□□□□□ -1.67
NXF1-212ENST00000531872 MEF2BQ02080 365 aaPredicted RBP4.65□□□□□ -1.67
NXF1-212ENST00000531872 CST9LP1Q5W188 147 aa4.65□□□□□ -1.67
NXF1-212ENST00000531872 AMMECR1LQ6DCA0 310 aa4.65□□□□□ -1.67
NXF1-212ENST00000531872 BAGE2Q86Y30 109 aa4.65□□□□□ -1.67
NXF1-212ENST00000531872 NUP35Q8NFH5 326 aa4.65□□□□□ -1.67
NXF1-212ENST00000531872 STOML3Q8TAV4 291 aa4.65□□□□□ -1.67
NXF1-212ENST00000531872 ISOC2Q96AB3 205 aa4.65□□□□□ -1.67
NXF1-212ENST00000531872 IGLV4-69A0A075B6H9 119 aa4.64□□□□□ -1.67
NXF1-212ENST00000531872 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.64□□□□□ -1.67
NXF1-212ENST00000531872 SCO2A0A1W2PP80 73 aa4.64□□□□□ -1.67
NXF1-212ENST00000531872 IGKV2-29A2NJV5 120 aaPredicted RBP4.64□□□□□ -1.67
NXF1-212ENST00000531872 MAP1LC3B2A6NCE7 125 aa4.64□□□□□ -1.67
NXF1-212ENST00000531872 APOMO95445 188 aa4.64□□□□□ -1.67
NXF1-212ENST00000531872 NCR2O95944 276 aa4.64□□□□□ -1.67
NXF1-212ENST00000531872 ZNF25P17030 456 aaPredicted RBP4.64□□□□□ -1.67
NXF1-212ENST00000531872 UBE2D1P51668 147 aa4.64□□□□□ -1.67
NXF1-212ENST00000531872 RPL7L1Q6DKI1 246 aaKnown RBP4.64□□□□□ -1.67
NXF1-212ENST00000531872 RNASEKQ6P5S7 137 aaKnown RBP4.64□□□□□ -1.67
NXF1-212ENST00000531872 CD164L2Q6UWJ8 174 aa4.64□□□□□ -1.67
NXF1-212ENST00000531872 Q6ZNX1 250 aa4.64□□□□□ -1.67
NXF1-212ENST00000531872 KRTAP11-1Q8IUC1 163 aa4.64□□□□□ -1.67
NXF1-212ENST00000531872 MAP1LC3BQ9GZQ8 125 aa4.64□□□□□ -1.67
NXF1-212ENST00000531872 CARHSP1Q9Y2V2 147 aaKnown RBP4.64□□□□□ -1.67
NXF1-212ENST00000531872 A0A087WZ39 114 aa4.63□□□□□ -1.67
NXF1-212ENST00000531872 TRGC1P0CF51 173 aa4.63□□□□□ -1.67
NXF1-212ENST00000531872 EIF5AP63241 154 aaKnown RBP4.63□□□□□ -1.67
NXF1-212ENST00000531872 ANKRD39Q53RE8 183 aa4.63□□□□□ -1.67
NXF1-212ENST00000531872 TPPP3Q9BW30 176 aa4.63□□□□□ -1.67
NXF1-212ENST00000531872 PAGE4O60829 102 aa4.62□□□□□ -1.67
NXF1-212ENST00000531872 UPK1BO75841 260 aa4.62□□□□□ -1.67
NXF1-212ENST00000531872 APCSP02743 223 aa4.62□□□□□ -1.67
NXF1-212ENST00000531872 IFITM3Q01628 133 aa4.62□□□□□ -1.67
NXF1-212ENST00000531872 AKR1C8PQ5T2L2 129 aa4.62□□□□□ -1.67
NXF1-212ENST00000531872 LINC00299Q6ZSB3 139 aa4.62□□□□□ -1.67
NXF1-212ENST00000531872 GATD1Q8NB37 220 aa4.62□□□□□ -1.67
NXF1-212ENST00000531872 TSKUQ8WUA8 353 aa4.62□□□□□ -1.67
NXF1-212ENST00000531872 C2orf48Q96LS8 159 aa4.62□□□□□ -1.67
NXF1-212ENST00000531872 BORCS7-ASMTA0A0B4J1R7 106 aa4.61□□□□□ -1.67
NXF1-212ENST00000531872 F2Z2F3 143 aa4.61□□□□□ -1.67
NXF1-212ENST00000531872 TSPAN13O95857 204 aa4.61□□□□□ -1.67
NXF1-212ENST00000531872 RPS20P60866 119 aaKnown RBP4.61□□□□□ -1.67
NXF1-212ENST00000531872 RPL18AQ02543 176 aaKnown RBP4.61□□□□□ -1.67
NXF1-212ENST00000531872 SS18Q15532 418 aa4.61□□□□□ -1.67
NXF1-212ENST00000531872 RNF151Q2KHN1 245 aa4.61□□□□□ -1.67
NXF1-212ENST00000531872 EIF5AL1Q6IS14 154 aaKnown RBP4.61□□□□□ -1.67
NXF1-212ENST00000531872 OR2D3Q8NGH3 330 aa4.61□□□□□ -1.67
NXF1-212ENST00000531872 TMEM101Q96IK0 257 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms