RNA–Protein interactions for RNA: ENST00000528824.1

SNX7-204, Transcript of sorting nexin 7, humanhuman

TSL 1 (best)

Gene SNX7, Length 1,562 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX7-204ENST00000528824 SRSF9Q13242 221 aaKnown RBP eCLIP4.78□□□□□ -1.64
SNX7-204ENST00000528824 AQP10Q96PS8 301 aa4.78□□□□□ -1.64
SNX7-204ENST00000528824 EPDR1Q9UM22 224 aa4.78□□□□□ -1.64
SNX7-204ENST00000528824 LINC00862A6NCI5 91 aa4.77□□□□□ -1.65
SNX7-204ENST00000528824 PET100P0DJ07 73 aa4.77□□□□□ -1.65
SNX7-204ENST00000528824 SULT1A2P50226 295 aa4.77□□□□□ -1.65
SNX7-204ENST00000528824 KRTAP26-1Q6PEX3 210 aa4.77□□□□□ -1.65
SNX7-204ENST00000528824 WFDC1Q9HC57 220 aa4.77□□□□□ -1.65
SNX7-204ENST00000528824 TMEM167BQ9NRX6 74 aa4.77□□□□□ -1.65
SNX7-204ENST00000528824 TRBV6-1A0A0K0K1D8 114 aa4.76□□□□□ -1.65
SNX7-204ENST00000528824 A0A1B0GUV1 79 aa4.76□□□□□ -1.65
SNX7-204ENST00000528824 UBE2L6O14933 153 aa4.76□□□□□ -1.65
SNX7-204ENST00000528824 SMIM17P0DL12 118 aa4.76□□□□□ -1.65
SNX7-204ENST00000528824 PRR4Q16378 134 aa4.76□□□□□ -1.65
SNX7-204ENST00000528824 CLLU1Q5K131 121 aa4.76□□□□□ -1.65
SNX7-204ENST00000528824 ALKAL2Q6UX46 152 aa4.76□□□□□ -1.65
SNX7-204ENST00000528824 SLC51BQ86UW2 128 aa4.76□□□□□ -1.65
SNX7-204ENST00000528824 NEXN-AS1Q8NBZ9 246 aa4.76□□□□□ -1.65
SNX7-204ENST00000528824 STOML3Q8TAV4 291 aa4.76□□□□□ -1.65
SNX7-204ENST00000528824 KRBOX1C9JBD0 128 aa4.75□□□□□ -1.65
SNX7-204ENST00000528824 NDUFA5Q16718 116 aa4.75□□□□□ -1.65
SNX7-204ENST00000528824 IQCJQ1A5X6 159 aa4.75□□□□□ -1.65
SNX7-204ENST00000528824 FAM162BQ5T6X4 162 aa4.75□□□□□ -1.65
SNX7-204ENST00000528824 PRSS3P2Q8NHM4 247 aa4.75□□□□□ -1.65
SNX7-204ENST00000528824 NKX6-2Q9C056 277 aaPredicted RBP4.75□□□□□ -1.65
SNX7-204ENST00000528824 ZFP30Q9Y2G7 519 aa4.75□□□□□ -1.65
SNX7-204ENST00000528824 TRAV1-1A0A0B4J248 108 aa4.74□□□□□ -1.65
SNX7-204ENST00000528824 TRAV34A0A0B4J273 112 aa4.74□□□□□ -1.65
SNX7-204ENST00000528824 M0R036 132 aa4.74□□□□□ -1.65
SNX7-204ENST00000528824 MBP02144 154 aa4.74□□□□□ -1.65
SNX7-204ENST00000528824 ARL14EPLP0DKL9 152 aa4.74□□□□□ -1.65
SNX7-204ENST00000528824 RPL12P30050 165 aaKnown RBP4.74□□□□□ -1.65
SNX7-204ENST00000528824 CDC34P49427 236 aaPredicted RBP4.74□□□□□ -1.65
SNX7-204ENST00000528824 RPL7L1Q6DKI1 246 aaKnown RBP4.74□□□□□ -1.65
SNX7-204ENST00000528824 FER1L6-AS1Q8NA97 138 aa4.74□□□□□ -1.65
SNX7-204ENST00000528824 DIRC1Q969H9 104 aa4.74□□□□□ -1.65
SNX7-204ENST00000528824 ZNF471Q9BX82 626 aaPredicted RBP4.74□□□□□ -1.65
SNX7-204ENST00000528824 ARL2-SNX15V9GYD0 113 aa4.74□□□□□ -1.65
SNX7-204ENST00000528824 KANTRA0A1W2PQU2 76 aa4.74□□□□□ -1.65
SNX7-204ENST00000528824 GRIFINA4D1Z8 144 aa4.74□□□□□ -1.65
SNX7-204ENST00000528824 CXorf1O96002 111 aa4.74□□□□□ -1.65
SNX7-204ENST00000528824 MT-ND6P03923 174 aa4.74□□□□□ -1.65
SNX7-204ENST00000528824 RAB5CP51148 216 aa4.74□□□□□ -1.65
SNX7-204ENST00000528824 PRR27Q6MZM9 219 aa4.74□□□□□ -1.65
SNX7-204ENST00000528824 INO80EQ8NBZ0 244 aaPredicted RBP4.74□□□□□ -1.65
SNX7-204ENST00000528824 TSKUQ8WUA8 353 aa4.74□□□□□ -1.65
SNX7-204ENST00000528824 HIST1H2BAQ96A08 127 aa4.74□□□□□ -1.65
SNX7-204ENST00000528824 TMEM243Q9BU79 118 aa4.74□□□□□ -1.65
SNX7-204ENST00000528824 IGLV1-50A0A075B6I6 118 aa4.73□□□□□ -1.65
SNX7-204ENST00000528824 A0A1W2PRE2 83 aa4.73□□□□□ -1.65
SNX7-204ENST00000528824 STAG3L2P0CL84 134 aa4.73□□□□□ -1.65
SNX7-204ENST00000528824 STAG3L3P0CL85 134 aa4.73□□□□□ -1.65
SNX7-204ENST00000528824 GCHFRP30047 84 aa4.73□□□□□ -1.65
SNX7-204ENST00000528824 RPL13AP40429 203 aaKnown RBP4.73□□□□□ -1.65
SNX7-204ENST00000528824 UBE2D1P51668 147 aa4.73□□□□□ -1.65
SNX7-204ENST00000528824 UBE2G1P62253 170 aa4.73□□□□□ -1.65
SNX7-204ENST00000528824 SPANXN1Q5VSR9 72 aa4.73□□□□□ -1.65
SNX7-204ENST00000528824 SMIM3Q9BZL3 60 aa4.73□□□□□ -1.65
SNX7-204ENST00000528824 A0A096LNI7 61 aa4.72□□□□□ -1.65
SNX7-204ENST00000528824 TEX46H3BTG2 121 aa4.72□□□□□ -1.65
SNX7-204ENST00000528824 HMGB3O15347 200 aaKnown RBP4.72□□□□□ -1.65
SNX7-204ENST00000528824 FOXI1Q12951 378 aa4.72□□□□□ -1.65
SNX7-204ENST00000528824 ZNF674Q2M3X9 581 aa4.72□□□□□ -1.65
SNX7-204ENST00000528824 NTM-AS1Q6ZSK4 140 aa4.72□□□□□ -1.65
SNX7-204ENST00000528824 C20orf203Q8NBC4 194 aa4.72□□□□□ -1.65
SNX7-204ENST00000528824 SUN5Q8TC36 379 aa4.72□□□□□ -1.65
SNX7-204ENST00000528824 ISOC2Q96AB3 205 aa4.72□□□□□ -1.65
SNX7-204ENST00000528824 MED9Q9NWA0 146 aa4.72□□□□□ -1.65
SNX7-204ENST00000528824 GVQW2A0A096LPI5 108 aaPredicted RBP4.71□□□□□ -1.66
SNX7-204ENST00000528824 PRYO14603 147 aa4.71□□□□□ -1.66
SNX7-204ENST00000528824 SH2D1AO60880 128 aa4.71□□□□□ -1.66
SNX7-204ENST00000528824 HIGD2BQ4VC39 106 aa4.71□□□□□ -1.66
SNX7-204ENST00000528824 COMMD7Q86VX2 200 aa4.71□□□□□ -1.66
SNX7-204ENST00000528824 FMC1Q96HJ9 113 aa4.71□□□□□ -1.66
SNX7-204ENST00000528824 ACTR3CQ9C0K3 210 aaPredicted RBP4.71□□□□□ -1.66
SNX7-204ENST00000528824 TMSB15BA0A087X1C1 80 aa4.7□□□□□ -1.66
SNX7-204ENST00000528824 MUC21A0A0G2JKD1 596 aa4.7□□□□□ -1.66
SNX7-204ENST00000528824 PEX7O00628 323 aa4.7□□□□□ -1.66
SNX7-204ENST00000528824 EIF3GO75821 320 aaKnown RBP eCLIP4.7□□□□□ -1.66
SNX7-204ENST00000528824 S100A1P23297 94 aa4.7□□□□□ -1.66
SNX7-204ENST00000528824 SERF2P84101 59 aa4.7□□□□□ -1.66
SNX7-204ENST00000528824 C1orf137Q5JT78 98 aa4.7□□□□□ -1.66
SNX7-204ENST00000528824 COX8CQ7Z4L0 72 aa4.7□□□□□ -1.66
SNX7-204ENST00000528824 Q86TA4 180 aa4.7□□□□□ -1.66
SNX7-204ENST00000528824 C15orf56Q8N910 161 aa4.7□□□□□ -1.66
SNX7-204ENST00000528824 CARD19Q96LW7 228 aa4.7□□□□□ -1.66
SNX7-204ENST00000528824 AP1S3Q96PC3 154 aa4.7□□□□□ -1.66
SNX7-204ENST00000528824 CTDSP1Q9GZU7 261 aa4.7□□□□□ -1.66
SNX7-204ENST00000528824 LPAP08519 4548 aa4.7□□□□□ -1.66
SNX7-204ENST00000528824 GAGE10A6NGK3 116 aa4.7□□□□□ -1.66
SNX7-204ENST00000528824 CXCL1P09341 107 aa4.7□□□□□ -1.66
SNX7-204ENST00000528824 EIF5AP63241 154 aaKnown RBP4.7□□□□□ -1.66
SNX7-204ENST00000528824 AMMECR1LQ6DCA0 310 aa4.7□□□□□ -1.66
SNX7-204ENST00000528824 PRR26Q8N8Z3 221 aa4.7□□□□□ -1.66
SNX7-204ENST00000528824 PGLYRP4Q96LB8 373 aa4.7□□□□□ -1.66
SNX7-204ENST00000528824 TCEAL7Q9BRU2 100 aa4.7□□□□□ -1.66
SNX7-204ENST00000528824 IGLV4-60A0A075B6I1 120 aa4.69□□□□□ -1.66
SNX7-204ENST00000528824 IGHV1-58A0A0C4DH39 117 aa4.69□□□□□ -1.66
SNX7-204ENST00000528824 IGKV3OR2-268A0A0C4DH90 116 aa4.69□□□□□ -1.66
SNX7-204ENST00000528824 LOC107984640A0A0U1RRK4 108 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms