RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 PRB1P04280 392 aa2.12□□□□□ -2.07
CLNS1A-208ENST00000527265 ASAH2BP0C7U1 165 aa2.12□□□□□ -2.07
CLNS1A-208ENST00000527265 MIFP14174 115 aa2.12□□□□□ -2.07
CLNS1A-208ENST00000527265 HIST1H1DP16402 221 aaKnown RBP2.12□□□□□ -2.07
CLNS1A-208ENST00000527265 SSR2P43308 183 aa2.12□□□□□ -2.07
CLNS1A-208ENST00000527265 CDK6Q00534 326 aa2.12□□□□□ -2.07
CLNS1A-208ENST00000527265 OR5AK2Q8NH90 309 aa2.12□□□□□ -2.07
CLNS1A-208ENST00000527265 PSMF1Q92530 271 aa2.12□□□□□ -2.07
CLNS1A-208ENST00000527265 RAB37Q96AX2 223 aa2.12□□□□□ -2.07
CLNS1A-208ENST00000527265 CST11Q9H112 138 aa2.12□□□□□ -2.07
CLNS1A-208ENST00000527265 RERGLQ9H628 205 aa2.12□□□□□ -2.07
CLNS1A-208ENST00000527265 BOD1L1Q8NFC6 3051 aa2.12□□□□□ -2.07
CLNS1A-208ENST00000527265 PRRC2AP48634 2157 aaKnown RBP2.12□□□□□ -2.07
CLNS1A-208ENST00000527265 ARHGAP32A7KAX9 2087 aa2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 CRYBG3Q68DQ2 2970 aa2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 AHCTF1Q8WYP5 2266 aa2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 SPENQ96T58 3664 aaKnown RBP2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 NUMA1Q14980 2115 aa2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 TMEM218A2RU14 115 aa2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 FNDC10F2Z333 226 aa2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 M0R2P5 195 aa2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 EDF1O60869 148 aaKnown RBP2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 ZNF846Q147U1 533 aa2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 DEFB113Q30KQ7 82 aa2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 KRTAP13-2Q52LG2 175 aa2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 LINC01545Q5VT33 79 aa2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 MIC13Q5XKP0 118 aa2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 NCBP2-AS2Q69YL0 99 aa2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 ZCCHC23Q6ZST2 131 aa2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 Q6ZUT4 128 aa2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 ACBD7Q8N6N7 88 aa2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 SEC11CQ9BY50 192 aa2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 AGPAT4-IT1Q9H0P7 198 aa2.11□□□□□ -2.07
CLNS1A-208ENST00000527265 NBASA2RRP1 2371 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 UTP20O75691 2785 aaKnown RBP2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 HEATR5BQ9P2D3 2071 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 IGLV10-54A0A075B6I4 117 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 TRAV30A0A087WSZ9 112 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 IGKV3D-11A0A0A0MRZ8 115 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 IGHV1-24A0A0C4DH33 117 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 LOC107984156A0A0G2JMH3 177 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 A0A0G2JND7 137 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 PNMA8CA0A1B0GUJ8 204 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 ZNF705FA8MVS1 300 aaPredicted RBP2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 ZNF736B4DX44 427 aaPredicted RBP2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 E7EUB6 86 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 C5orf67F2Z3F1 127 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 APOC4-APOC2K7ER74 178 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 YPEL1O60688 119 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 APOC2P02655 101 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 ETV6P41212 452 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 DSCR4P56555 118 aaPredicted RBP2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 LINC00315P59091 139 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 TPPP2P59282 170 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 ASB16-AS1Q495Z4 193 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 Q6ZTI0 123 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 ARL17AQ8IVW1 177 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 C8orf59Q8N0T1 100 aaPredicted RBP2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 DEFB106AQ8N104 65 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 FAM19A2Q8N3H0 131 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 CMTM2Q8TAZ6 248 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 CYYR1Q96J86 154 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 MRPL57Q9BQC6 102 aaKnown RBP2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 IER3IP1Q9Y5U9 82 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 SPTBN1Q01082 2364 aaKnown RBP2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 COL6A5A8TX70 2615 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 ADGRG4Q8IZF6 3080 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 DIDO1Q9BTC0 2240 aaKnown RBP2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 COL1A2P08123 1366 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 TLN2Q9Y4G6 2542 aa2.1□□□□□ -2.07
CLNS1A-208ENST00000527265 APC2O95996 2303 aa2.09□□□□□ -2.07
CLNS1A-208ENST00000527265 CELSR1Q9NYQ6 3014 aa2.09□□□□□ -2.07
CLNS1A-208ENST00000527265 PTPRBP23467 1997 aa2.09□□□□□ -2.07
CLNS1A-208ENST00000527265 A0A087WSZ3 146 aa2.09□□□□□ -2.07
CLNS1A-208ENST00000527265 M0R143 59 aa2.09□□□□□ -2.07
CLNS1A-208ENST00000527265 CCL22O00626 93 aa2.09□□□□□ -2.07
CLNS1A-208ENST00000527265 CD2P06729 351 aa2.09□□□□□ -2.07
CLNS1A-208ENST00000527265 GNG2P59768 71 aa2.09□□□□□ -2.07
CLNS1A-208ENST00000527265 CATR1Q13166 79 aa2.09□□□□□ -2.07
CLNS1A-208ENST00000527265 NCMAPQ5T1S8 102 aa2.09□□□□□ -2.07
CLNS1A-208ENST00000527265 ATP11AUNQ6ZP68 121 aa2.09□□□□□ -2.07
CLNS1A-208ENST00000527265 ARPINQ7Z6K5 226 aa2.09□□□□□ -2.07
CLNS1A-208ENST00000527265 LINC00269Q8N2A0 174 aa2.09□□□□□ -2.07
CLNS1A-208ENST00000527265 TMEM254Q8TBM7 123 aa2.09□□□□□ -2.07
CLNS1A-208ENST00000527265 MUCL1Q96DR8 90 aa2.09□□□□□ -2.07
CLNS1A-208ENST00000527265 Q96M85 177 aa2.09□□□□□ -2.07
CLNS1A-208ENST00000527265 NAA60Q9H7X0 242 aa2.09□□□□□ -2.07
CLNS1A-208ENST00000527265 MDC1Q14676 2089 aaKnown RBP2.09□□□□□ -2.07
CLNS1A-208ENST00000527265 CACNA1EQ15878 2313 aa2.08□□□□□ -2.08
CLNS1A-208ENST00000527265 CELSR2Q9HCU4 2923 aa2.08□□□□□ -2.08
CLNS1A-208ENST00000527265 ATMQ13315 3056 aa2.08□□□□□ -2.08
CLNS1A-208ENST00000527265 PLXNA2O75051 1894 aa2.08□□□□□ -2.08
CLNS1A-208ENST00000527265 TRAV12-1A0A0B4J245 112 aa2.08□□□□□ -2.08
CLNS1A-208ENST00000527265 C3orf85A0A1B0GTC6 90 aa2.08□□□□□ -2.08
CLNS1A-208ENST00000527265 HYPMO75409 117 aa2.08□□□□□ -2.08
CLNS1A-208ENST00000527265 KLF7O75840 302 aaPredicted RBP2.08□□□□□ -2.08
CLNS1A-208ENST00000527265 TNFP01375 233 aa2.08□□□□□ -2.08
CLNS1A-208ENST00000527265 IFNA17P01571 189 aa2.08□□□□□ -2.08
CLNS1A-208ENST00000527265 P0C880 135 aa2.08□□□□□ -2.08
CLNS1A-208ENST00000527265 RPL26P61254 145 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms