RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 CEBPGP53567 150 aa7.78□□□□□ -1.16
SSBP3-210ENST00000525990 PKIAP61925 76 aa7.78□□□□□ -1.16
SSBP3-210ENST00000525990 C14orf177Q52M58 125 aa7.78□□□□□ -1.16
SSBP3-210ENST00000525990 TMEM243Q9BU79 118 aa7.78□□□□□ -1.16
SSBP3-210ENST00000525990 CNFNQ9BYD5 112 aa7.78□□□□□ -1.16
SSBP3-210ENST00000525990 GAS8-AS1O95177 125 aa7.77□□□□□ -1.17
SSBP3-210ENST00000525990 BIN3Q9NQY0 253 aa7.77□□□□□ -1.17
SSBP3-210ENST00000525990 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.77□□□□□ -1.17
SSBP3-210ENST00000525990 AMTP48728 403 aa7.76□□□□□ -1.17
SSBP3-210ENST00000525990 LYPD6BQ8NI32 183 aa7.76□□□□□ -1.17
SSBP3-210ENST00000525990 PGLYRP4Q96LB8 373 aa7.76□□□□□ -1.17
SSBP3-210ENST00000525990 GATCO43716 136 aaKnown RBP7.75□□□□□ -1.17
SSBP3-210ENST00000525990 SLPIP03973 132 aa7.75□□□□□ -1.17
SSBP3-210ENST00000525990 TAGLN2P37802 199 aaKnown RBP7.75□□□□□ -1.17
SSBP3-210ENST00000525990 COTL1Q14019 142 aa7.75□□□□□ -1.17
SSBP3-210ENST00000525990 WDR73Q6P4I2 378 aa7.75□□□□□ -1.17
SSBP3-210ENST00000525990 C9orf163Q8N9P6 203 aa7.75□□□□□ -1.17
SSBP3-210ENST00000525990 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.74□□□□□ -1.17
SSBP3-210ENST00000525990 IGKV3OR2-268A0A0C4DH90 116 aa7.74□□□□□ -1.17
SSBP3-210ENST00000525990 A0A1B0GUV1 79 aa7.74□□□□□ -1.17
SSBP3-210ENST00000525990 A0A1B0GVG6 124 aa7.74□□□□□ -1.17
SSBP3-210ENST00000525990 IGKV2-29A2NJV5 120 aaPredicted RBP7.74□□□□□ -1.17
SSBP3-210ENST00000525990 TMEM250H0YL14 139 aa7.74□□□□□ -1.17
SSBP3-210ENST00000525990 J3QL48 77 aa7.74□□□□□ -1.17
SSBP3-210ENST00000525990 HNRNPA3P51991 378 aaKnown RBP7.74□□□□□ -1.17
SSBP3-210ENST00000525990 BLOC1S1P78537 153 aa7.74□□□□□ -1.17
SSBP3-210ENST00000525990 hDV102S1A0JD36 115 aa7.73□□□□□ -1.17
SSBP3-210ENST00000525990 UBE2L6O14933 153 aa7.73□□□□□ -1.17
SSBP3-210ENST00000525990 DGAT2L7PQ6IED9 249 aa7.73□□□□□ -1.17
SSBP3-210ENST00000525990 SDIM1Q6ZPB5 146 aa7.73□□□□□ -1.17
SSBP3-210ENST00000525990 KRTAP29-1A8MX34 341 aaPredicted RBP7.72□□□□□ -1.17
SSBP3-210ENST00000525990 FAM231DQ6ZW35 169 aa7.72□□□□□ -1.17
SSBP3-210ENST00000525990 C15orf56Q8N910 161 aa7.72□□□□□ -1.17
SSBP3-210ENST00000525990 TRAV8-4A0A0B4J246 113 aa7.71□□□□□ -1.18
SSBP3-210ENST00000525990 GAGE12HA6NDE8 117 aa7.71□□□□□ -1.18
SSBP3-210ENST00000525990 SDHAF1A6NFY7 115 aa7.71□□□□□ -1.18
SSBP3-210ENST00000525990 CHTF8P0CG12 524 aa7.71□□□□□ -1.18
SSBP3-210ENST00000525990 LINC01551Q86U37 167 aa7.71□□□□□ -1.18
SSBP3-210ENST00000525990 SMIM7Q9BQ49 75 aa7.71□□□□□ -1.18
SSBP3-210ENST00000525990 EIF5A2Q9GZV4 153 aaKnown RBP7.71□□□□□ -1.18
SSBP3-210ENST00000525990 LRP1Q07954 4544 aaKnown RBP7.7□□□□□ -1.18
SSBP3-210ENST00000525990 FAM231BA6NCW3 169 aa7.7□□□□□ -1.18
SSBP3-210ENST00000525990 A8MWL6 223 aa7.7□□□□□ -1.18
SSBP3-210ENST00000525990 SRP19P09132 144 aaKnown RBP7.7□□□□□ -1.18
SSBP3-210ENST00000525990 RPS10P46783 165 aaKnown RBP7.7□□□□□ -1.18
SSBP3-210ENST00000525990 RPL37AP61513 92 aaKnown RBP7.7□□□□□ -1.18
SSBP3-210ENST00000525990 CNBPP62633 177 aaKnown RBP7.7□□□□□ -1.18
SSBP3-210ENST00000525990 FAM210AQ96ND0 272 aa7.7□□□□□ -1.18
SSBP3-210ENST00000525990 HIGD1CA8MV81 97 aa7.69□□□□□ -1.18
SSBP3-210ENST00000525990 APCSP02743 223 aa7.69□□□□□ -1.18
SSBP3-210ENST00000525990 FGF6P10767 208 aa7.69□□□□□ -1.18
SSBP3-210ENST00000525990 HIGD2BQ4VC39 106 aa7.69□□□□□ -1.18
SSBP3-210ENST00000525990 AMMECR1LQ6DCA0 310 aa7.69□□□□□ -1.18
SSBP3-210ENST00000525990 RNASEKQ6P5S7 137 aaKnown RBP7.69□□□□□ -1.18
SSBP3-210ENST00000525990 SMIM15Q7Z3B0 74 aa7.69□□□□□ -1.18
SSBP3-210ENST00000525990 CLRN3Q8NCR9 226 aa7.69□□□□□ -1.18
SSBP3-210ENST00000525990 RNF185Q96GF1 192 aa7.69□□□□□ -1.18
SSBP3-210ENST00000525990 TMEM242Q9NWH2 141 aa7.69□□□□□ -1.18
SSBP3-210ENST00000525990 ZNF727A8MUV8 499 aa7.68□□□□□ -1.18
SSBP3-210ENST00000525990 C9JQL5 133 aa7.68□□□□□ -1.18
SSBP3-210ENST00000525990 SMKR1H3BMG3 65 aa7.68□□□□□ -1.18
SSBP3-210ENST00000525990 NCR2O95944 276 aa7.68□□□□□ -1.18
SSBP3-210ENST00000525990 TSHBP01222 138 aa7.68□□□□□ -1.18
SSBP3-210ENST00000525990 CT83Q5H943 113 aa7.68□□□□□ -1.18
SSBP3-210ENST00000525990 AMN1Q8IY45 258 aa7.68□□□□□ -1.18
SSBP3-210ENST00000525990 TSKUQ8WUA8 353 aa7.68□□□□□ -1.18
SSBP3-210ENST00000525990 CHCHD10Q8WYQ3 142 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-210ENST00000525990 V9GYV3 84 aa7.68□□□□□ -1.18
SSBP3-210ENST00000525990 TRBV6-5A0A0K0K1A5 114 aa7.67□□□□□ -1.18
SSBP3-210ENST00000525990 A0A1B0GUT8 65 aa7.67□□□□□ -1.18
SSBP3-210ENST00000525990 PMCHP20382 165 aa7.67□□□□□ -1.18
SSBP3-210ENST00000525990 CIRBPQ14011 172 aaKnown RBP7.67□□□□□ -1.18
SSBP3-210ENST00000525990 PKHD1L1Q86WI1 4243 aa7.66□□□□□ -1.18
SSBP3-210ENST00000525990 IGHV3-64A0A075B6Q5 118 aa7.66□□□□□ -1.18
SSBP3-210ENST00000525990 I3L3M4 83 aa7.66□□□□□ -1.18
SSBP3-210ENST00000525990 ESDP10768 282 aa7.66□□□□□ -1.18
SSBP3-210ENST00000525990 RAB4AP20338 218 aa7.66□□□□□ -1.18
SSBP3-210ENST00000525990 SRSF3P84103 164 aaKnown RBP7.66□□□□□ -1.18
SSBP3-210ENST00000525990 LINC00526Q96FQ7 95 aa7.66□□□□□ -1.18
SSBP3-210ENST00000525990 TMEM191AQ9H0A3 160 aa7.66□□□□□ -1.18
SSBP3-210ENST00000525990 OSTCQ9NRP0 149 aa7.66□□□□□ -1.18
SSBP3-210ENST00000525990 AP5S1Q9NUS5 200 aa7.66□□□□□ -1.18
SSBP3-210ENST00000525990 A0A087WYN8 130 aa7.65□□□□□ -1.18
SSBP3-210ENST00000525990 POLR2KP53803 58 aaKnown RBP7.65□□□□□ -1.18
SSBP3-210ENST00000525990 FOXI1Q12951 378 aa7.65□□□□□ -1.18
SSBP3-210ENST00000525990 TEX261Q6UWH6 196 aa7.65□□□□□ -1.18
SSBP3-210ENST00000525990 NUP35Q8NFH5 326 aa7.65□□□□□ -1.18
SSBP3-210ENST00000525990 SPACA4Q8TDM5 124 aa7.65□□□□□ -1.18
SSBP3-210ENST00000525990 ISOC2Q96AB3 205 aa7.65□□□□□ -1.18
SSBP3-210ENST00000525990 BORCS7Q96B45 105 aa7.65□□□□□ -1.18
SSBP3-210ENST00000525990 ST20Q9HBF5 79 aa7.65□□□□□ -1.18
SSBP3-210ENST00000525990 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.64□□□□□ -1.19
SSBP3-210ENST00000525990 H7C423 109 aa7.64□□□□□ -1.19
SSBP3-210ENST00000525990 XCL1P47992 114 aa7.64□□□□□ -1.19
SSBP3-210ENST00000525990 RPL23P62829 140 aaKnown RBP7.64□□□□□ -1.19
SSBP3-210ENST00000525990 COX6A2Q02221 97 aa7.64□□□□□ -1.19
SSBP3-210ENST00000525990 OR5A1Q8NGJ0 315 aa7.64□□□□□ -1.19
SSBP3-210ENST00000525990 PRSS3P2Q8NHM4 247 aa7.64□□□□□ -1.19
SSBP3-210ENST00000525990 FAT3Q8TDW7 4589 aa7.64□□□□□ -1.19
SSBP3-210ENST00000525990 LINC00959A0A1B0GUT2 108 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms