RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 CST9LQ9H4G1 147 aa13.23□□□□□ -0.29
TRAPPC9-210ENST00000521667 TRRAPQ9Y4A5 3859 aa13.23□□□□□ -0.29
TRAPPC9-210ENST00000521667 WFDC9Q8NEX5 89 aa13.23□□□□□ -0.29
TRAPPC9-210ENST00000521667 SIVA1O15304 175 aa13.22□□□□□ -0.29
TRAPPC9-210ENST00000521667 C12orf54Q6X4T0 127 aa13.22□□□□□ -0.29
TRAPPC9-210ENST00000521667 GAGE12BA1L429 117 aa13.21□□□□□ -0.29
TRAPPC9-210ENST00000521667 GAGE7O76087 117 aa13.21□□□□□ -0.29
TRAPPC9-210ENST00000521667 GAGE12FP0CL80 117 aa13.21□□□□□ -0.29
TRAPPC9-210ENST00000521667 GAGE12GP0CL81 117 aa13.21□□□□□ -0.29
TRAPPC9-210ENST00000521667 GAGE12IP0CL82 117 aa13.21□□□□□ -0.29
TRAPPC9-210ENST00000521667 IGLV4-69A0A075B6H9 119 aa13.2□□□□□ -0.3
TRAPPC9-210ENST00000521667 TRGV2A0A075B6R0 118 aa13.2□□□□□ -0.3
TRAPPC9-210ENST00000521667 TRBV10-1A0A0K0K1A3 114 aa13.2□□□□□ -0.3
TRAPPC9-210ENST00000521667 K7EQD1 137 aa13.2□□□□□ -0.3
TRAPPC9-210ENST00000521667 PAPPA-AS1Q5QFB9 102 aa13.2□□□□□ -0.3
TRAPPC9-210ENST00000521667 PHLDA1Q8WV24 401 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC9-210ENST00000521667 OPRPNQ99935 248 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC9-210ENST00000521667 PYGO1Q9Y3Y4 419 aa13.2□□□□□ -0.3
TRAPPC9-210ENST00000521667 IGHV3-38A0A0C4DH36 116 aa13.19□□□□□ -0.3
TRAPPC9-210ENST00000521667 COTL1Q14019 142 aa13.19□□□□□ -0.3
TRAPPC9-210ENST00000521667 TMEM97Q5BJF2 176 aa13.19□□□□□ -0.3
TRAPPC9-210ENST00000521667 BVES-AS1Q5T3Y7 98 aa13.19□□□□□ -0.3
TRAPPC9-210ENST00000521667 ZNRF2Q8NHG8 242 aa13.19□□□□□ -0.3
TRAPPC9-210ENST00000521667 CHCHD7Q9BUK0 85 aa13.19□□□□□ -0.3
TRAPPC9-210ENST00000521667 TTTY13Q9BZ97 58 aa13.19□□□□□ -0.3
TRAPPC9-210ENST00000521667 TRBV7-3A0A075B6L6 115 aa13.18□□□□□ -0.3
TRAPPC9-210ENST00000521667 CIDEAO60543 219 aa13.18□□□□□ -0.3
TRAPPC9-210ENST00000521667 ZNF25P17030 456 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC9-210ENST00000521667 IGLV4-3A0A075B6K6 122 aa13.18□□□□□ -0.3
TRAPPC9-210ENST00000521667 C11orf86A6NJI1 115 aa13.18□□□□□ -0.3
TRAPPC9-210ENST00000521667 RPL36AP83881 106 aaKnown RBP13.18□□□□□ -0.3
TRAPPC9-210ENST00000521667 GAGE1Q13065 139 aa13.18□□□□□ -0.3
TRAPPC9-210ENST00000521667 SLC25A29Q8N8R3 303 aa13.18□□□□□ -0.3
TRAPPC9-210ENST00000521667 RPL36ALQ969Q0 106 aaKnown RBP13.18□□□□□ -0.3
TRAPPC9-210ENST00000521667 WIPF1O43516 503 aa13.17□□□□□ -0.3
TRAPPC9-210ENST00000521667 EMP1P54849 157 aa13.17□□□□□ -0.3
TRAPPC9-210ENST00000521667 TRAV8-6A0A0B4J262 113 aa13.16□□□□□ -0.3
TRAPPC9-210ENST00000521667 VCX2Q9H322 139 aa13.16□□□□□ -0.3
TRAPPC9-210ENST00000521667 E9PLD3 99 aa13.15□□□□□ -0.3
TRAPPC9-210ENST00000521667 NPSP0C0P6 89 aa13.15□□□□□ -0.3
TRAPPC9-210ENST00000521667 OR11H2Q8NH07 326 aa13.15□□□□□ -0.3
TRAPPC9-210ENST00000521667 KIR2DL5BQ8NHK3 375 aa13.15□□□□□ -0.3
TRAPPC9-210ENST00000521667 X6R8D5 127 aa13.15□□□□□ -0.3
TRAPPC9-210ENST00000521667 SMIM9A6NGZ8 99 aa13.15□□□□□ -0.3
TRAPPC9-210ENST00000521667 SPANXA1Q9NS26 97 aa13.15□□□□□ -0.3
TRAPPC9-210ENST00000521667 HIGD1BQ9P298 99 aa13.15□□□□□ -0.3
TRAPPC9-210ENST00000521667 STAB1Q9NY15 2570 aa13.14□□□□□ -0.31
TRAPPC9-210ENST00000521667 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC9-210ENST00000521667 IGKV2-29A2NJV5 120 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC9-210ENST00000521667 APOC4P55056 127 aa13.14□□□□□ -0.31
TRAPPC9-210ENST00000521667 HSD52Q0P140 79 aa13.14□□□□□ -0.31
TRAPPC9-210ENST00000521667 MAPKAPK5-AS1Q8N8E1 139 aa13.14□□□□□ -0.31
TRAPPC9-210ENST00000521667 UBE2D4Q9Y2X8 147 aa13.14□□□□□ -0.31
TRAPPC9-210ENST00000521667 TRBV25-1A0A075B6N4 114 aa13.13□□□□□ -0.31
TRAPPC9-210ENST00000521667 TRBV6-4A0A1B0GX49 114 aa13.13□□□□□ -0.31
TRAPPC9-210ENST00000521667 CRYBA4P53673 196 aa13.13□□□□□ -0.31
TRAPPC9-210ENST00000521667 UBE2D3P61077 147 aa13.13□□□□□ -0.31
TRAPPC9-210ENST00000521667 UBE2D2P62837 147 aa13.13□□□□□ -0.31
TRAPPC9-210ENST00000521667 CEMP1Q6PRD7 247 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC9-210ENST00000521667 DAZ4Q86SG3 579 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-210ENST00000521667 NFE4Q86UQ8 179 aa13.13□□□□□ -0.31
TRAPPC9-210ENST00000521667 FAM104AQ969W3 186 aa13.13□□□□□ -0.31
TRAPPC9-210ENST00000521667 DAZ3Q9NR90 486 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-210ENST00000521667 GAGE12JA6NER3 117 aa13.13□□□□□ -0.31
TRAPPC9-210ENST00000521667 GAGE4Q13068 117 aa13.13□□□□□ -0.31
TRAPPC9-210ENST00000521667 GAGE5Q13069 117 aa13.13□□□□□ -0.31
TRAPPC9-210ENST00000521667 GAGE13Q4V321 117 aa13.13□□□□□ -0.31
TRAPPC9-210ENST00000521667 C3orf56Q8N813 242 aa13.13□□□□□ -0.31
TRAPPC9-210ENST00000521667 AMELXQ99217 191 aa13.13□□□□□ -0.31
TRAPPC9-210ENST00000521667 PRADC1Q9BSG0 188 aa13.13□□□□□ -0.31
TRAPPC9-210ENST00000521667 TRGV4A0A0C4DH28 118 aa13.12□□□□□ -0.31
TRAPPC9-210ENST00000521667 HERVK_113P61574 105 aa13.12□□□□□ -0.31
TRAPPC9-210ENST00000521667 NOTCH3Q9UM47 2321 aa13.12□□□□□ -0.31
TRAPPC9-210ENST00000521667 TMEM170BQ5T4T1 132 aa13.12□□□□□ -0.31
TRAPPC9-210ENST00000521667 LINC00612Q8N6U2 182 aa13.12□□□□□ -0.31
TRAPPC9-210ENST00000521667 CHAC1Q9BUX1 264 aa13.12□□□□□ -0.31
TRAPPC9-210ENST00000521667 FHL2Q14192 279 aa13.1□□□□□ -0.31
TRAPPC9-210ENST00000521667 MYMXA0A1B0GTQ4 84 aa13.1□□□□□ -0.31
TRAPPC9-210ENST00000521667 DEFB130BP0DP73 79 aa13.1□□□□□ -0.31
TRAPPC9-210ENST00000521667 DEFB130AP0DP74 79 aa13.1□□□□□ -0.31
TRAPPC9-210ENST00000521667 DEFB135Q30KP9 77 aa13.1□□□□□ -0.31
TRAPPC9-210ENST00000521667 SEC11AP67812 179 aa13.09□□□□□ -0.31
TRAPPC9-210ENST00000521667 A0A0J9YXV3 536 aa13.08□□□□□ -0.31
TRAPPC9-210ENST00000521667 ORAOV1Q8WV07 137 aa13.08□□□□□ -0.31
TRAPPC9-210ENST00000521667 TIMM21Q9BVV7 248 aa13.08□□□□□ -0.31
TRAPPC9-210ENST00000521667 NTM-AS1Q6ZSK4 140 aa13.08□□□□□ -0.32
TRAPPC9-210ENST00000521667 CMYA5Q8N3K9 4069 aa13.07□□□□□ -0.32
TRAPPC9-210ENST00000521667 COL6A5A8TX70 2615 aa13.07□□□□□ -0.32
TRAPPC9-210ENST00000521667 LOC100131303A0A0U1RQF7 123 aa13.07□□□□□ -0.32
TRAPPC9-210ENST00000521667 RNASE13Q5GAN3 156 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-210ENST00000521667 Q6ZUT4 128 aa13.07□□□□□ -0.32
TRAPPC9-210ENST00000521667 ZNF22P17026 224 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC9-210ENST00000521667 MRPS36P82909 103 aaKnown RBP13.06□□□□□ -0.32
TRAPPC9-210ENST00000521667 GTSF1LQ9H1H1 148 aa13.06□□□□□ -0.32
TRAPPC9-210ENST00000521667 IGHV4-30-4P0DP06 118 aa13.06□□□□□ -0.32
TRAPPC9-210ENST00000521667 SHISA2Q6UWI4 295 aa13.06□□□□□ -0.32
TRAPPC9-210ENST00000521667 TMEM223A0PJW6 202 aa13.05□□□□□ -0.32
TRAPPC9-210ENST00000521667 ZNF815PA8K554 130 aa13.05□□□□□ -0.32
TRAPPC9-210ENST00000521667 DGAT2L7PQ6IED9 249 aa13.05□□□□□ -0.32
TRAPPC9-210ENST00000521667 Q6ZVH6 145 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms