RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 GRNP28799 593 aaKnown RBP7.59□□□□□ -1.19
PDGFRB-207ENST00000520579 HIST1H4AP62805 103 aaKnown RBP7.59□□□□□ -1.19
PDGFRB-207ENST00000520579 LY6EQ16553 131 aa7.59□□□□□ -1.19
PDGFRB-207ENST00000520579 SDIM1Q6ZPB5 146 aa7.59□□□□□ -1.19
PDGFRB-207ENST00000520579 LINC00643Q86TS7 51 aa7.59□□□□□ -1.19
PDGFRB-207ENST00000520579 MPLKIPQ8TAP9 179 aa7.59□□□□□ -1.19
PDGFRB-207ENST00000520579 FAM110DQ8TAY7 271 aaPredicted RBP7.59□□□□□ -1.19
PDGFRB-207ENST00000520579 IMUPQ9GZP8 106 aa7.59□□□□□ -1.19
PDGFRB-207ENST00000520579 IGLV4-69A0A075B6H9 119 aa7.58□□□□□ -1.2
PDGFRB-207ENST00000520579 TRBV12-3P01733 135 aa7.58□□□□□ -1.2
PDGFRB-207ENST00000520579 ATP5G1P05496 136 aa7.58□□□□□ -1.2
PDGFRB-207ENST00000520579 HOXD3P31249 432 aaPredicted RBP7.58□□□□□ -1.2
PDGFRB-207ENST00000520579 PRM2P04554 102 aa7.58□□□□□ -1.2
PDGFRB-207ENST00000520579 PMAIP1Q13794 54 aa7.58□□□□□ -1.2
PDGFRB-207ENST00000520579 SLC25A29Q8N8R3 303 aa7.58□□□□□ -1.2
PDGFRB-207ENST00000520579 P0DMU3 169 aa7.58□□□□□ -1.2
PDGFRB-207ENST00000520579 FAM231AP0DMU4 169 aa7.58□□□□□ -1.2
PDGFRB-207ENST00000520579 FAM231CP0DMU5 169 aa7.58□□□□□ -1.2
PDGFRB-207ENST00000520579 COX6B1P14854 86 aa7.58□□□□□ -1.2
PDGFRB-207ENST00000520579 ZNF876PQ49A33 203 aa7.57□□□□□ -1.2
PDGFRB-207ENST00000520579 SUMO4Q6EEV6 95 aa7.57□□□□□ -1.2
PDGFRB-207ENST00000520579 FN1P02751 2386 aaKnown RBP7.57□□□□□ -1.2
PDGFRB-207ENST00000520579 IGHV3-38A0A0C4DH36 116 aa7.57□□□□□ -1.2
PDGFRB-207ENST00000520579 EBI3Q14213 229 aa7.57□□□□□ -1.2
PDGFRB-207ENST00000520579 ZNF561-AS1K7EIQ3 104 aa7.57□□□□□ -1.2
PDGFRB-207ENST00000520579 FAM223AQ8IWN6 122 aa7.57□□□□□ -1.2
PDGFRB-207ENST00000520579 Q96MF0 132 aa7.57□□□□□ -1.2
PDGFRB-207ENST00000520579 MUC4Q99102 2169 aa7.57□□□□□ -1.2
PDGFRB-207ENST00000520579 TRAV21A0A0B4J279 112 aa7.56□□□□□ -1.2
PDGFRB-207ENST00000520579 UNQ9165/PRO28630Q6UXU0 137 aa7.56□□□□□ -1.2
PDGFRB-207ENST00000520579 C20orf197Q8N268 126 aa7.56□□□□□ -1.2
PDGFRB-207ENST00000520579 CENPEQ02224 2701 aa7.56□□□□□ -1.2
PDGFRB-207ENST00000520579 IGHV7-81A0A0B4J1V7 117 aa7.56□□□□□ -1.2
PDGFRB-207ENST00000520579 SS18Q15532 418 aa7.56□□□□□ -1.2
PDGFRB-207ENST00000520579 SERP2Q8N6R1 65 aa7.56□□□□□ -1.2
PDGFRB-207ENST00000520579 VMO1Q7Z5L0 202 aa7.56□□□□□ -1.2
PDGFRB-207ENST00000520579 USP9XQ93008 2570 aaPredicted RBP7.56□□□□□ -1.2
PDGFRB-207ENST00000520579 POLQO75417 2590 aa7.56□□□□□ -1.2
PDGFRB-207ENST00000520579 CD28P10747 220 aa7.55□□□□□ -1.2
PDGFRB-207ENST00000520579 CNFNQ9BYD5 112 aa7.55□□□□□ -1.2
PDGFRB-207ENST00000520579 ZNF292O60281 2723 aa7.55□□□□□ -1.2
PDGFRB-207ENST00000520579 TMEM263Q8WUH6 116 aaKnown RBP7.55□□□□□ -1.2
PDGFRB-207ENST00000520579 IGKV3OR2-268A0A0C4DH90 116 aa7.55□□□□□ -1.2
PDGFRB-207ENST00000520579 SPANXDQ9BXN6 97 aa7.55□□□□□ -1.2
PDGFRB-207ENST00000520579 A0A087WVE0 104 aa7.54□□□□□ -1.2
PDGFRB-207ENST00000520579 H7C423 109 aa7.54□□□□□ -1.2
PDGFRB-207ENST00000520579 ADAMTSL4-AS1Q5T5F5 129 aa7.54□□□□□ -1.2
PDGFRB-207ENST00000520579 MRPL55Q7Z7F7 128 aaKnown RBP7.54□□□□□ -1.2
PDGFRB-207ENST00000520579 ICOSQ9Y6W8 199 aa7.54□□□□□ -1.2
PDGFRB-207ENST00000520579 H3BT86 120 aa7.54□□□□□ -1.2
PDGFRB-207ENST00000520579 TIMM21Q9BVV7 248 aa7.54□□□□□ -1.2
PDGFRB-207ENST00000520579 VCYO14598 125 aa7.53□□□□□ -1.2
PDGFRB-207ENST00000520579 NXPH4O95158 308 aa7.53□□□□□ -1.2
PDGFRB-207ENST00000520579 RPL18AQ02543 176 aaKnown RBP7.53□□□□□ -1.2
PDGFRB-207ENST00000520579 CCDC140Q96MF4 163 aa7.53□□□□□ -1.2
PDGFRB-207ENST00000520579 PROK1P58294 105 aa7.53□□□□□ -1.2
PDGFRB-207ENST00000520579 NDUFA12Q9UI09 145 aa7.53□□□□□ -1.2
PDGFRB-207ENST00000520579 A0A0J9YXY3 114 aa7.53□□□□□ -1.2
PDGFRB-207ENST00000520579 M0R1W7 72 aa7.53□□□□□ -1.2
PDGFRB-207ENST00000520579 Q9HAA7 133 aa7.53□□□□□ -1.2
PDGFRB-207ENST00000520579 IGHV3-16A0A0C4DH30 117 aa7.52□□□□□ -1.2
PDGFRB-207ENST00000520579 PLA2G2CQ5R387 149 aa7.52□□□□□ -1.2
PDGFRB-207ENST00000520579 BRD3OSQ6XYD6 125 aa7.52□□□□□ -1.2
PDGFRB-207ENST00000520579 DAZ4Q86SG3 579 aaKnown RBP7.52□□□□□ -1.2
PDGFRB-207ENST00000520579 DAZ1Q9NQZ3 744 aaKnown RBP7.52□□□□□ -1.2
PDGFRB-207ENST00000520579 STHQ8IWL8 128 aa7.52□□□□□ -1.21
PDGFRB-207ENST00000520579 ZFAND3Q9H8U3 227 aa7.52□□□□□ -1.21
PDGFRB-207ENST00000520579 A0A0B4J2C4 111 aa7.52□□□□□ -1.21
PDGFRB-207ENST00000520579 TIMM17BO60830 172 aa7.52□□□□□ -1.21
PDGFRB-207ENST00000520579 ACYP1P07311 99 aa7.52□□□□□ -1.21
PDGFRB-207ENST00000520579 PRIMA1Q86XR5 153 aa7.52□□□□□ -1.21
PDGFRB-207ENST00000520579 ZFAND2AQ8N6M9 145 aa7.52□□□□□ -1.21
PDGFRB-207ENST00000520579 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.52□□□□□ -1.21
PDGFRB-207ENST00000520579 IGKV2-29A2NJV5 120 aaPredicted RBP7.52□□□□□ -1.21
PDGFRB-207ENST00000520579 I3L3M4 83 aa7.52□□□□□ -1.21
PDGFRB-207ENST00000520579 IGHV3-30-3P0DP02 117 aa7.52□□□□□ -1.21
PDGFRB-207ENST00000520579 GPHB5Q86YW7 130 aa7.52□□□□□ -1.21
PDGFRB-207ENST00000520579 FAM240AA0A1B0GVK7 77 aa7.51□□□□□ -1.21
PDGFRB-207ENST00000520579 RNASE1P07998 156 aaKnown RBP7.51□□□□□ -1.21
PDGFRB-207ENST00000520579 RNASE3P12724 160 aaKnown RBP7.51□□□□□ -1.21
PDGFRB-207ENST00000520579 SPINK13Q1W4C9 94 aa7.51□□□□□ -1.21
PDGFRB-207ENST00000520579 IGIPA6NJ69 53 aa7.51□□□□□ -1.21
PDGFRB-207ENST00000520579 PAPPA-AS1Q5QFB9 102 aa7.51□□□□□ -1.21
PDGFRB-207ENST00000520579 C9orf47Q6ZRZ4 202 aa7.51□□□□□ -1.21
PDGFRB-207ENST00000520579 SMIM26A0A096LP01 95 aa7.51□□□□□ -1.21
PDGFRB-207ENST00000520579 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.51□□□□□ -1.21
PDGFRB-207ENST00000520579 SMCR5Q8TEV8 140 aa7.51□□□□□ -1.21
PDGFRB-207ENST00000520579 Q9UF83 564 aa7.51□□□□□ -1.21
PDGFRB-207ENST00000520579 RBMY1BA6NDE4 496 aaKnown RBP7.5□□□□□ -1.21
PDGFRB-207ENST00000520579 RBMY1EA6NEQ0 496 aaKnown RBP7.5□□□□□ -1.21
PDGFRB-207ENST00000520579 RBMY1DP0C7P1 496 aaKnown RBP7.5□□□□□ -1.21
PDGFRB-207ENST00000520579 RBMY1A1P0DJD3 496 aaKnown RBP7.5□□□□□ -1.21
PDGFRB-207ENST00000520579 RBMY1CP0DJD4 496 aa7.5□□□□□ -1.21
PDGFRB-207ENST00000520579 RBMY1FQ15415 496 aaKnown RBP7.5□□□□□ -1.21
PDGFRB-207ENST00000520579 LINC00474Q9P2X8 69 aa7.5□□□□□ -1.21
PDGFRB-207ENST00000520579 RNF223E7ERA6 249 aa7.5□□□□□ -1.21
PDGFRB-207ENST00000520579 DGAT2L7PQ6IED9 249 aa7.5□□□□□ -1.21
PDGFRB-207ENST00000520579 SOSTDC1Q6X4U4 206 aa7.5□□□□□ -1.21
PDGFRB-207ENST00000520579 USP17L23D6RBM5 183 aa7.5□□□□□ -1.21
PDGFRB-207ENST00000520579 FHL2Q14192 279 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms