RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 STPG4Q8N801 248 aa10.29□□□□□ -0.76
CLN8-204ENST00000519254 Q8NAQ8 132 aa10.29□□□□□ -0.76
CLN8-204ENST00000519254 BAALCQ8WXS3 180 aa10.29□□□□□ -0.76
CLN8-204ENST00000519254 DNAJC30Q96LL9 226 aa10.29□□□□□ -0.76
CLN8-204ENST00000519254 NBEAL2Q6ZNJ1 2754 aa10.29□□□□□ -0.76
CLN8-204ENST00000519254 GAGE12BA1L429 117 aa10.29□□□□□ -0.76
CLN8-204ENST00000519254 GAGE7O76087 117 aa10.29□□□□□ -0.76
CLN8-204ENST00000519254 GAGE12FP0CL80 117 aa10.29□□□□□ -0.76
CLN8-204ENST00000519254 GAGE12GP0CL81 117 aa10.29□□□□□ -0.76
CLN8-204ENST00000519254 GAGE12IP0CL82 117 aa10.29□□□□□ -0.76
CLN8-204ENST00000519254 ANKRD39Q53RE8 183 aa10.29□□□□□ -0.76
CLN8-204ENST00000519254 MRPL35Q9NZE8 188 aaKnown RBP10.29□□□□□ -0.76
CLN8-204ENST00000519254 HHLA3Q9XRX5 114 aa10.29□□□□□ -0.76
CLN8-204ENST00000519254 C20orf203Q8NBC4 194 aa10.28□□□□□ -0.76
CLN8-204ENST00000519254 DPM2O94777 84 aa10.27□□□□□ -0.77
CLN8-204ENST00000519254 IGKCP01834 107 aa10.27□□□□□ -0.77
CLN8-204ENST00000519254 TP73-AS1Q9UF72 201 aa10.27□□□□□ -0.77
CLN8-204ENST00000519254 DEFB130BP0DP73 79 aa10.26□□□□□ -0.77
CLN8-204ENST00000519254 DEFB130AP0DP74 79 aa10.26□□□□□ -0.77
CLN8-204ENST00000519254 FAM222AQ5U5X8 452 aa10.26□□□□□ -0.77
CLN8-204ENST00000519254 TIMM17AQ99595 171 aa10.26□□□□□ -0.77
CLN8-204ENST00000519254 SPATA25Q9BR10 227 aa10.26□□□□□ -0.77
CLN8-204ENST00000519254 TRGV2A0A075B6R0 118 aa10.26□□□□□ -0.77
CLN8-204ENST00000519254 PRSS29PA6NIE9 313 aa10.26□□□□□ -0.77
CLN8-204ENST00000519254 CTAG1AP78358 180 aa10.26□□□□□ -0.77
CLN8-204ENST00000519254 TMEM141Q96I45 108 aa10.26□□□□□ -0.77
CLN8-204ENST00000519254 F8VRH5 84 aa10.25□□□□□ -0.77
CLN8-204ENST00000519254 K7EQD1 137 aa10.25□□□□□ -0.77
CLN8-204ENST00000519254 SLC25A29Q8N8R3 303 aa10.25□□□□□ -0.77
CLN8-204ENST00000519254 TM2D3Q9BRN9 247 aa10.25□□□□□ -0.77
CLN8-204ENST00000519254 SNHG12Q9BXW3 62 aa10.25□□□□□ -0.77
CLN8-204ENST00000519254 CHTOPQ9Y3Y2 248 aaKnown RBP10.25□□□□□ -0.77
CLN8-204ENST00000519254 EREGO14944 169 aa10.24□□□□□ -0.77
CLN8-204ENST00000519254 COX8AP10176 69 aa10.24□□□□□ -0.77
CLN8-204ENST00000519254 HNRNPA3P51991 378 aaKnown RBP10.24□□□□□ -0.77
CLN8-204ENST00000519254 SLC25A34Q6PIV7 304 aa10.24□□□□□ -0.77
CLN8-204ENST00000519254 LINC00612Q8N6U2 182 aa10.24□□□□□ -0.77
CLN8-204ENST00000519254 ZNRF2Q8NHG8 242 aa10.24□□□□□ -0.77
CLN8-204ENST00000519254 PHLDA1Q8WV24 401 aaPredicted RBP10.24□□□□□ -0.77
CLN8-204ENST00000519254 CELA1Q9UNI1 258 aa10.24□□□□□ -0.77
CLN8-204ENST00000519254 TRBV7-3A0A075B6L6 115 aa10.24□□□□□ -0.77
CLN8-204ENST00000519254 IGHV3-38A0A0C4DH36 116 aa10.24□□□□□ -0.77
CLN8-204ENST00000519254 TRBV10-1A0A0K0K1A3 114 aa10.24□□□□□ -0.77
CLN8-204ENST00000519254 CIDEAO60543 219 aa10.24□□□□□ -0.77
CLN8-204ENST00000519254 PLNP26678 52 aa10.24□□□□□ -0.77
CLN8-204ENST00000519254 TCTAP57738 103 aa10.24□□□□□ -0.77
CLN8-204ENST00000519254 ZC2HC1BQ5TFG8 222 aa10.24□□□□□ -0.77
CLN8-204ENST00000519254 CHCHD7Q9BUK0 85 aa10.24□□□□□ -0.77
CLN8-204ENST00000519254 OPRPNQ99935 248 aaPredicted RBP10.23□□□□□ -0.77
CLN8-204ENST00000519254 CST9LQ9H4G1 147 aa10.23□□□□□ -0.77
CLN8-204ENST00000519254 MRPS16Q9Y3D3 137 aaKnown RBP10.23□□□□□ -0.77
CLN8-204ENST00000519254 LYRM9A8MSI8 78 aa10.22□□□□□ -0.77
CLN8-204ENST00000519254 M0R143 59 aa10.22□□□□□ -0.77
CLN8-204ENST00000519254 FGF6P10767 208 aa10.22□□□□□ -0.77
CLN8-204ENST00000519254 PMVKQ15126 192 aa10.22□□□□□ -0.77
CLN8-204ENST00000519254 MRPL52Q86TS9 123 aaKnown RBP10.22□□□□□ -0.77
CLN8-204ENST00000519254 A0A0J9YWU9 116 aa10.21□□□□□ -0.77
CLN8-204ENST00000519254 SPART-AS1P0CW21 52 aa10.21□□□□□ -0.77
CLN8-204ENST00000519254 RPL36AP83881 106 aaKnown RBP10.21□□□□□ -0.77
CLN8-204ENST00000519254 COTL1Q14019 142 aa10.21□□□□□ -0.77
CLN8-204ENST00000519254 FHL2Q14192 279 aa10.21□□□□□ -0.77
CLN8-204ENST00000519254 RPL36ALQ969Q0 106 aaKnown RBP10.21□□□□□ -0.77
CLN8-204ENST00000519254 FAM104AQ969W3 186 aa10.21□□□□□ -0.77
CLN8-204ENST00000519254 B9D2Q9BPU9 175 aa10.21□□□□□ -0.77
CLN8-204ENST00000519254 IGKV2D-26A0A0A0MRZ7 120 aa10.21□□□□□ -0.78
CLN8-204ENST00000519254 TRBV6-4A0A1B0GX49 114 aa10.21□□□□□ -0.78
CLN8-204ENST00000519254 UBE2D3P61077 147 aa10.21□□□□□ -0.78
CLN8-204ENST00000519254 DAD1P61803 113 aa10.21□□□□□ -0.78
CLN8-204ENST00000519254 UBE2D2P62837 147 aa10.21□□□□□ -0.78
CLN8-204ENST00000519254 PYGO1Q9Y3Y4 419 aa10.21□□□□□ -0.78
CLN8-204ENST00000519254 IGLV4-69A0A075B6H9 119 aa10.2□□□□□ -0.78
CLN8-204ENST00000519254 IGLV4-3A0A075B6K6 122 aa10.2□□□□□ -0.78
CLN8-204ENST00000519254 TRGV4A0A0C4DH28 118 aa10.2□□□□□ -0.78
CLN8-204ENST00000519254 BOD1L2Q8IYS8 172 aa10.2□□□□□ -0.78
CLN8-204ENST00000519254 GAGE12JA6NER3 117 aa10.19□□□□□ -0.78
CLN8-204ENST00000519254 GAGE1Q13065 139 aa10.19□□□□□ -0.78
CLN8-204ENST00000519254 GAGE4Q13068 117 aa10.19□□□□□ -0.78
CLN8-204ENST00000519254 GAGE5Q13069 117 aa10.19□□□□□ -0.78
CLN8-204ENST00000519254 GAGE13Q4V321 117 aa10.19□□□□□ -0.78
CLN8-204ENST00000519254 PCP2Q8IVA1 136 aa10.19□□□□□ -0.78
CLN8-204ENST00000519254 C11orf68Q9H3H3 251 aaKnown RBP10.19□□□□□ -0.78
CLN8-204ENST00000519254 LOC100131303A0A0U1RQF7 123 aa10.19□□□□□ -0.78
CLN8-204ENST00000519254 NMUP48645 174 aa10.19□□□□□ -0.78
CLN8-204ENST00000519254 CEMP1Q6PRD7 247 aaPredicted RBP10.19□□□□□ -0.78
CLN8-204ENST00000519254 DAZ4Q86SG3 579 aaKnown RBP10.19□□□□□ -0.78
CLN8-204ENST00000519254 C2orf88Q9BSF0 95 aa10.19□□□□□ -0.78
CLN8-204ENST00000519254 DAZ3Q9NR90 486 aaKnown RBP10.19□□□□□ -0.78
CLN8-204ENST00000519254 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.18□□□□□ -0.78
CLN8-204ENST00000519254 IGKV2-29A2NJV5 120 aaPredicted RBP10.18□□□□□ -0.78
CLN8-204ENST00000519254 LBHQ53QV2 105 aaPredicted RBP10.18□□□□□ -0.78
CLN8-204ENST00000519254 NTM-AS1Q6ZSK4 140 aa10.18□□□□□ -0.78
CLN8-204ENST00000519254 C2orf91Q6ZV80 131 aa10.18□□□□□ -0.78
CLN8-204ENST00000519254 C11orf86A6NJI1 115 aa10.17□□□□□ -0.78
CLN8-204ENST00000519254 DLEU1O43261 78 aa10.17□□□□□ -0.78
CLN8-204ENST00000519254 UBE2D4Q9Y2X8 147 aa10.17□□□□□ -0.78
CLN8-204ENST00000519254 TEX48A0A1B0GUV7 120 aa10.16□□□□□ -0.78
CLN8-204ENST00000519254 HTN3P15516 51 aa10.16□□□□□ -0.78
CLN8-204ENST00000519254 AMELXQ99217 191 aa10.16□□□□□ -0.78
CLN8-204ENST00000519254 SPANXA1Q9NS26 97 aa10.16□□□□□ -0.78
CLN8-204ENST00000519254 NPSP0C0P6 89 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms