RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 MAP1LC3B2A6NCE7 125 aa5.62□□□□□ -1.51
LINCR-0001-201ENST00000517732 UPK1BO75841 260 aa5.62□□□□□ -1.51
LINCR-0001-201ENST00000517732 AMTP48728 403 aa5.62□□□□□ -1.51
LINCR-0001-201ENST00000517732 FHITP49789 147 aa5.62□□□□□ -1.51
LINCR-0001-201ENST00000517732 NKX2-5P52952 324 aaPredicted RBP5.62□□□□□ -1.51
LINCR-0001-201ENST00000517732 SRSF9Q13242 221 aaKnown RBP eCLIP5.62□□□□□ -1.51
LINCR-0001-201ENST00000517732 COTL1Q14019 142 aa5.62□□□□□ -1.51
LINCR-0001-201ENST00000517732 ZNF726P1Q15940 193 aa5.62□□□□□ -1.51
LINCR-0001-201ENST00000517732 PGLYRP4Q96LB8 373 aa5.62□□□□□ -1.51
LINCR-0001-201ENST00000517732 MAP1LC3BQ9GZQ8 125 aa5.62□□□□□ -1.51
LINCR-0001-201ENST00000517732 M0QY20 66 aa5.61□□□□□ -1.51
LINCR-0001-201ENST00000517732 LPAP08519 4548 aa5.61□□□□□ -1.51
LINCR-0001-201ENST00000517732 DEFA1P59665 94 aa5.61□□□□□ -1.51
LINCR-0001-201ENST00000517732 AMMECR1LQ6DCA0 310 aa5.61□□□□□ -1.51
LINCR-0001-201ENST00000517732 SUMO4Q6EEV6 95 aa5.61□□□□□ -1.51
LINCR-0001-201ENST00000517732 RASL11AQ6T310 242 aa5.61□□□□□ -1.51
LINCR-0001-201ENST00000517732 INO80EQ8NBZ0 244 aaPredicted RBP5.61□□□□□ -1.51
LINCR-0001-201ENST00000517732 CHCHD10Q8WYQ3 142 aaPredicted RBP5.61□□□□□ -1.51
LINCR-0001-201ENST00000517732 KRTAP9-2Q9BYQ4 174 aa5.61□□□□□ -1.51
LINCR-0001-201ENST00000517732 PFDN1O60925 122 aa5.6□□□□□ -1.51
LINCR-0001-201ENST00000517732 CACNG7P62955 275 aa5.6□□□□□ -1.51
LINCR-0001-201ENST00000517732 CARD19Q96LW7 228 aa5.6□□□□□ -1.51
LINCR-0001-201ENST00000517732 TPPP3Q9BW30 176 aa5.6□□□□□ -1.51
LINCR-0001-201ENST00000517732 PSORS1C2Q9UIG4 136 aa5.6□□□□□ -1.51
LINCR-0001-201ENST00000517732 MT-ND6P03923 174 aa5.59□□□□□ -1.51
LINCR-0001-201ENST00000517732 TRGC1P0CF51 173 aa5.59□□□□□ -1.51
LINCR-0001-201ENST00000517732 RPL7L1Q6DKI1 246 aaKnown RBP5.59□□□□□ -1.51
LINCR-0001-201ENST00000517732 RNASEKQ6P5S7 137 aaKnown RBP5.59□□□□□ -1.51
LINCR-0001-201ENST00000517732 BAGE2Q86Y30 109 aa5.59□□□□□ -1.51
LINCR-0001-201ENST00000517732 MED28Q9H204 178 aa5.59□□□□□ -1.51
LINCR-0001-201ENST00000517732 NIT2Q9NQR4 276 aa5.59□□□□□ -1.51
LINCR-0001-201ENST00000517732 IGHV1-58A0A0C4DH39 117 aa5.58□□□□□ -1.52
LINCR-0001-201ENST00000517732 ZNF561-AS1K7EIQ3 104 aa5.58□□□□□ -1.52
LINCR-0001-201ENST00000517732 PAGE4O60829 102 aa5.58□□□□□ -1.52
LINCR-0001-201ENST00000517732 RPS20P60866 119 aaKnown RBP5.58□□□□□ -1.52
LINCR-0001-201ENST00000517732 FER1L6-AS1Q8NA97 138 aa5.58□□□□□ -1.52
LINCR-0001-201ENST00000517732 SYCNQ0VAF6 134 aa5.57□□□□□ -1.52
LINCR-0001-201ENST00000517732 ISOC2Q96AB3 205 aa5.57□□□□□ -1.52
LINCR-0001-201ENST00000517732 BTF3L4Q96K17 158 aa5.57□□□□□ -1.52
LINCR-0001-201ENST00000517732 MLST8Q9BVC4 326 aa5.57□□□□□ -1.52
LINCR-0001-201ENST00000517732 LOC107984640A0A0U1RRK4 108 aa5.56□□□□□ -1.52
LINCR-0001-201ENST00000517732 XKRY2A2RUG3 117 aa5.56□□□□□ -1.52
LINCR-0001-201ENST00000517732 H7C423 109 aa5.56□□□□□ -1.52
LINCR-0001-201ENST00000517732 NCR2O95944 276 aa5.56□□□□□ -1.52
LINCR-0001-201ENST00000517732 APCSP02743 223 aa5.56□□□□□ -1.52
LINCR-0001-201ENST00000517732 XCL1P47992 114 aa5.56□□□□□ -1.52
LINCR-0001-201ENST00000517732 PTTG1IPP53801 180 aa5.56□□□□□ -1.52
LINCR-0001-201ENST00000517732 IFITM3Q01628 133 aa5.56□□□□□ -1.52
LINCR-0001-201ENST00000517732 FOXI1Q12951 378 aa5.56□□□□□ -1.52
LINCR-0001-201ENST00000517732 GAGE2BQ13066 116 aa5.56□□□□□ -1.52
LINCR-0001-201ENST00000517732 DIRC1Q969H9 104 aa5.56□□□□□ -1.52
LINCR-0001-201ENST00000517732 TMEM101Q96IK0 257 aa5.56□□□□□ -1.52
LINCR-0001-201ENST00000517732 FXYD6-FXYD2A0A087WZ82 144 aa5.55□□□□□ -1.52
LINCR-0001-201ENST00000517732 F2Z2F3 143 aa5.55□□□□□ -1.52
LINCR-0001-201ENST00000517732 IGLC6P0CF74 106 aa5.55□□□□□ -1.52
LINCR-0001-201ENST00000517732 ZNF25P17030 456 aaPredicted RBP5.55□□□□□ -1.52
LINCR-0001-201ENST00000517732 PRR4Q16378 134 aa5.55□□□□□ -1.52
LINCR-0001-201ENST00000517732 C1orf137Q5JT78 98 aa5.55□□□□□ -1.52
LINCR-0001-201ENST00000517732 OR2D3Q8NGH3 330 aa5.55□□□□□ -1.52
LINCR-0001-201ENST00000517732 OR5A1Q8NGJ0 315 aa5.55□□□□□ -1.52
LINCR-0001-201ENST00000517732 ALG5Q9Y673 324 aa5.55□□□□□ -1.52
LINCR-0001-201ENST00000517732 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.54□□□□□ -1.52
LINCR-0001-201ENST00000517732 IGKV2-29A2NJV5 120 aaPredicted RBP5.54□□□□□ -1.52
LINCR-0001-201ENST00000517732 CCL25O15444 150 aa5.54□□□□□ -1.52
LINCR-0001-201ENST00000517732 FGF6P10767 208 aa5.54□□□□□ -1.52
LINCR-0001-201ENST00000517732 NTF3P20783 257 aa5.54□□□□□ -1.52
LINCR-0001-201ENST00000517732 CAMPP49913 170 aa5.54□□□□□ -1.52
LINCR-0001-201ENST00000517732 SS18Q15532 418 aa5.54□□□□□ -1.52
LINCR-0001-201ENST00000517732 TMUB2Q71RG4 321 aa5.54□□□□□ -1.52
LINCR-0001-201ENST00000517732 PRR26Q8N8Z3 221 aa5.54□□□□□ -1.52
LINCR-0001-201ENST00000517732 LINC00526Q96FQ7 95 aa5.54□□□□□ -1.52
LINCR-0001-201ENST00000517732 IGLV1-50A0A075B6I6 118 aa5.53□□□□□ -1.52
LINCR-0001-201ENST00000517732 KRTAP9-6A0A140TA67 174 aa5.53□□□□□ -1.52
LINCR-0001-201ENST00000517732 GIPP09681 153 aaPredicted RBP5.53□□□□□ -1.52
LINCR-0001-201ENST00000517732 RPL35P42766 123 aaKnown RBP5.53□□□□□ -1.52
LINCR-0001-201ENST00000517732 UBE2D1P51668 147 aa5.53□□□□□ -1.52
LINCR-0001-201ENST00000517732 EIF5AP63241 154 aaKnown RBP5.53□□□□□ -1.52
LINCR-0001-201ENST00000517732 EIF5AL1Q6IS14 154 aaKnown RBP5.53□□□□□ -1.52
LINCR-0001-201ENST00000517732 TSKUQ8WUA8 353 aa5.53□□□□□ -1.52
LINCR-0001-201ENST00000517732 SFT2D1Q8WV19 159 aa5.53□□□□□ -1.52
LINCR-0001-201ENST00000517732 IGLV4-69A0A075B6H9 119 aa5.52□□□□□ -1.53
LINCR-0001-201ENST00000517732 TRAV1-1A0A0B4J248 108 aa5.52□□□□□ -1.53
LINCR-0001-201ENST00000517732 LINC00959A0A1B0GUT2 108 aa5.52□□□□□ -1.53
LINCR-0001-201ENST00000517732 A0A1B0GV50 99 aa5.52□□□□□ -1.53
LINCR-0001-201ENST00000517732 IFNA1P01562 189 aa5.52□□□□□ -1.53
LINCR-0001-201ENST00000517732 MALP21145 153 aa5.52□□□□□ -1.53
LINCR-0001-201ENST00000517732 RPL18AQ02543 176 aaKnown RBP5.52□□□□□ -1.53
LINCR-0001-201ENST00000517732 C9orf116Q5BN46 136 aaPredicted RBP5.52□□□□□ -1.53
LINCR-0001-201ENST00000517732 Q6ZNX1 250 aa5.52□□□□□ -1.53
LINCR-0001-201ENST00000517732 SMIM15Q7Z3B0 74 aa5.52□□□□□ -1.53
LINCR-0001-201ENST00000517732 KCNRGQ8N5I3 272 aa5.52□□□□□ -1.53
LINCR-0001-201ENST00000517732 A0A1W2PNN7 141 aa5.51□□□□□ -1.53
LINCR-0001-201ENST00000517732 H0Y9J4 135 aa5.51□□□□□ -1.53
LINCR-0001-201ENST00000517732 APOMO95445 188 aa5.51□□□□□ -1.53
LINCR-0001-201ENST00000517732 IGLV7-43P04211 117 aa5.51□□□□□ -1.53
LINCR-0001-201ENST00000517732 BCL2P10415 239 aa5.51□□□□□ -1.53
LINCR-0001-201ENST00000517732 PMCHP20382 165 aa5.51□□□□□ -1.53
LINCR-0001-201ENST00000517732 RPL13AP40429 203 aaKnown RBP5.51□□□□□ -1.53
LINCR-0001-201ENST00000517732 TWIST1Q15672 202 aa5.51□□□□□ -1.53
LINCR-0001-201ENST00000517732 Q5BKY6 102 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms