RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 KRTAP1-5Q9BYS1 174 aa6.73□□□□□ -1.33
CLN8-202ENST00000517514 TRAPPC1Q9Y5R8 145 aa6.73□□□□□ -1.33
CLN8-202ENST00000517514 DNAH11Q96DT5 4516 aa6.72□□□□□ -1.33
CLN8-202ENST00000517514 ESDP10768 282 aa6.72□□□□□ -1.33
CLN8-202ENST00000517514 RAB5AP20339 215 aa6.72□□□□□ -1.33
CLN8-202ENST00000517514 IQCJQ1A5X6 159 aa6.72□□□□□ -1.33
CLN8-202ENST00000517514 CHCHD7Q9BUK0 85 aa6.72□□□□□ -1.33
CLN8-202ENST00000517514 SMIM2Q9BVW6 85 aa6.72□□□□□ -1.33
CLN8-202ENST00000517514 I3L3M4 83 aa6.71□□□□□ -1.34
CLN8-202ENST00000517514 VCYO14598 125 aa6.71□□□□□ -1.34
CLN8-202ENST00000517514 PPP1R17O96001 155 aa6.71□□□□□ -1.34
CLN8-202ENST00000517514 UBE2DNLQ8IWF7 75 aa6.71□□□□□ -1.34
CLN8-202ENST00000517514 URB1-AS1Q96HZ7 61 aa6.71□□□□□ -1.34
CLN8-202ENST00000517514 Q9H8V8 135 aa6.71□□□□□ -1.34
CLN8-202ENST00000517514 LAMTOR2Q9Y2Q5 125 aa6.71□□□□□ -1.34
CLN8-202ENST00000517514 LOC389332A0A1B0GUA5 103 aa6.7□□□□□ -1.34
CLN8-202ENST00000517514 TRGC2P03986 189 aa6.7□□□□□ -1.34
CLN8-202ENST00000517514 DNAH10OSP0CZ25 163 aa6.7□□□□□ -1.34
CLN8-202ENST00000517514 PMCHP20382 165 aa6.7□□□□□ -1.34
CLN8-202ENST00000517514 COTL1Q14019 142 aa6.7□□□□□ -1.34
CLN8-202ENST00000517514 Q6ZR54 194 aa6.7□□□□□ -1.34
CLN8-202ENST00000517514 NIT1Q86X76 327 aa6.7□□□□□ -1.34
CLN8-202ENST00000517514 IGHV1-24A0A0C4DH33 117 aa6.69□□□□□ -1.34
CLN8-202ENST00000517514 TCAPO15273 167 aa6.69□□□□□ -1.34
CLN8-202ENST00000517514 SIVA1O15304 175 aa6.69□□□□□ -1.34
CLN8-202ENST00000517514 IFI27P40305 119 aaPredicted RBP6.69□□□□□ -1.34
CLN8-202ENST00000517514 TMEM97Q5BJF2 176 aa6.69□□□□□ -1.34
CLN8-202ENST00000517514 Q8N8P6 123 aa6.69□□□□□ -1.34
CLN8-202ENST00000517514 C18orf32Q8TCD1 76 aa6.69□□□□□ -1.34
CLN8-202ENST00000517514 MAP1LC3AQ9H492 121 aa6.69□□□□□ -1.34
CLN8-202ENST00000517514 TRBV25-1A0A075B6N4 114 aa6.68□□□□□ -1.34
CLN8-202ENST00000517514 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.68□□□□□ -1.34
CLN8-202ENST00000517514 TRAV8-6A0A0B4J262 113 aa6.68□□□□□ -1.34
CLN8-202ENST00000517514 IGKV2-29A2NJV5 120 aaPredicted RBP6.68□□□□□ -1.34
CLN8-202ENST00000517514 LINC01546A6NGU7 62 aa6.68□□□□□ -1.34
CLN8-202ENST00000517514 GAGE6Q13070 117 aa6.68□□□□□ -1.34
CLN8-202ENST00000517514 MPV17L2Q567V2 206 aa6.68□□□□□ -1.34
CLN8-202ENST00000517514 LINC01556Q5JQF7 62 aa6.68□□□□□ -1.34
CLN8-202ENST00000517514 FAM104AQ969W3 186 aa6.68□□□□□ -1.34
CLN8-202ENST00000517514 TMEM243Q9BU79 118 aa6.68□□□□□ -1.34
CLN8-202ENST00000517514 PKD1P98161 4303 aa6.68□□□□□ -1.34
CLN8-202ENST00000517514 IGLV4-60A0A075B6I1 120 aa6.67□□□□□ -1.34
CLN8-202ENST00000517514 NBDYA0A0U1RRE5 68 aa6.67□□□□□ -1.34
CLN8-202ENST00000517514 M0R2N4 97 aa6.67□□□□□ -1.34
CLN8-202ENST00000517514 IGHV3-30P01768 117 aa6.67□□□□□ -1.34
CLN8-202ENST00000517514 IGHV3-33P01772 117 aa6.67□□□□□ -1.34
CLN8-202ENST00000517514 IGHV3-30-3P0DP02 117 aa6.67□□□□□ -1.34
CLN8-202ENST00000517514 IGHV3-30-5P0DP03 117 aa6.67□□□□□ -1.34
CLN8-202ENST00000517514 AMTP48728 403 aa6.67□□□□□ -1.34
CLN8-202ENST00000517514 RBX1P62877 108 aa6.67□□□□□ -1.34
CLN8-202ENST00000517514 Q8N976 141 aa6.67□□□□□ -1.34
CLN8-202ENST00000517514 CHCHD5Q9BSY4 110 aa6.67□□□□□ -1.34
CLN8-202ENST00000517514 LINC00310P59036 64 aa6.66□□□□□ -1.34
CLN8-202ENST00000517514 RPL39P62891 51 aaKnown RBP6.66□□□□□ -1.34
CLN8-202ENST00000517514 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.66□□□□□ -1.34
CLN8-202ENST00000517514 C20orf203Q8NBC4 194 aa6.66□□□□□ -1.34
CLN8-202ENST00000517514 KIR2DL4Q99706 377 aa6.66□□□□□ -1.34
CLN8-202ENST00000517514 NXT2Q9NPJ8 142 aaKnown RBP6.66□□□□□ -1.34
CLN8-202ENST00000517514 A0A096LNJ9 63 aa6.64□□□□□ -1.35
CLN8-202ENST00000517514 A0A1B0GUV1 79 aa6.64□□□□□ -1.35
CLN8-202ENST00000517514 IBA57-AS1B1ANH7 110 aa6.64□□□□□ -1.35
CLN8-202ENST00000517514 TMEM262E9PQX1 116 aa6.64□□□□□ -1.35
CLN8-202ENST00000517514 FGF6P10767 208 aa6.64□□□□□ -1.35
CLN8-202ENST00000517514 FCER1GP30273 86 aa6.64□□□□□ -1.35
CLN8-202ENST00000517514 Q0VG73 95 aa6.64□□□□□ -1.35
CLN8-202ENST00000517514 Q6ZRN7 208 aaPredicted RBP6.64□□□□□ -1.35
CLN8-202ENST00000517514 MRPL52Q86TS9 123 aaKnown RBP6.64□□□□□ -1.35
CLN8-202ENST00000517514 PRSS3P2Q8NHM4 247 aa6.64□□□□□ -1.35
CLN8-202ENST00000517514 UBE2D4Q9Y2X8 147 aa6.64□□□□□ -1.35
CLN8-202ENST00000517514 H7C423 109 aa6.63□□□□□ -1.35
CLN8-202ENST00000517514 NUPR1O60356 82 aa6.63□□□□□ -1.35
CLN8-202ENST00000517514 HIST1H2BKO60814 126 aa6.63□□□□□ -1.35
CLN8-202ENST00000517514 HIST1H2BJP06899 126 aa6.63□□□□□ -1.35
CLN8-202ENST00000517514 HIST1H2BOP23527 126 aa6.63□□□□□ -1.35
CLN8-202ENST00000517514 HIST1H2BBP33778 126 aa6.63□□□□□ -1.35
CLN8-202ENST00000517514 HIST1H2BDP58876 126 aa6.63□□□□□ -1.35
CLN8-202ENST00000517514 HIST1H2BCP62807 126 aa6.63□□□□□ -1.35
CLN8-202ENST00000517514 LAGE3Q14657 143 aa6.63□□□□□ -1.35
CLN8-202ENST00000517514 HIST2H2BEQ16778 126 aa6.63□□□□□ -1.35
CLN8-202ENST00000517514 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.63□□□□□ -1.35
CLN8-202ENST00000517514 ENHOQ6UWT2 76 aa6.63□□□□□ -1.35
CLN8-202ENST00000517514 HIST1H2BHQ93079 126 aa6.63□□□□□ -1.35
CLN8-202ENST00000517514 HIST1H2BNQ99877 126 aa6.63□□□□□ -1.35
CLN8-202ENST00000517514 HIST1H2BMQ99879 126 aa6.63□□□□□ -1.35
CLN8-202ENST00000517514 PRR34Q9NV39 138 aa6.63□□□□□ -1.35
CLN8-202ENST00000517514 KLK12Q9UKR0 248 aa6.63□□□□□ -1.35
CLN8-202ENST00000517514 A0A087WX48 190 aa6.62□□□□□ -1.35
CLN8-202ENST00000517514 K7EMI3 77 aa6.62□□□□□ -1.35
CLN8-202ENST00000517514 LINC00614P0C842 121 aa6.62□□□□□ -1.35
CLN8-202ENST00000517514 OPRPNQ99935 248 aaPredicted RBP6.62□□□□□ -1.35
CLN8-202ENST00000517514 TIMM21Q9BVV7 248 aa6.62□□□□□ -1.35
CLN8-202ENST00000517514 HECTD4Q9Y4D8 3996 aa6.62□□□□□ -1.35
CLN8-202ENST00000517514 IGIPA6NJ69 53 aa6.61□□□□□ -1.35
CLN8-202ENST00000517514 UBE2L6O14933 153 aa6.61□□□□□ -1.35
CLN8-202ENST00000517514 RTL8CO15255 209 aa6.61□□□□□ -1.35
CLN8-202ENST00000517514 PMCHL1Q16048 86 aa6.61□□□□□ -1.35
CLN8-202ENST00000517514 ORMDL2Q53FV1 153 aa6.61□□□□□ -1.35
CLN8-202ENST00000517514 TTC32Q5I0X7 151 aa6.61□□□□□ -1.35
CLN8-202ENST00000517514 KRTAP26-1Q6PEX3 210 aa6.61□□□□□ -1.35
CLN8-202ENST00000517514 C2orf66Q6UXQ4 117 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms