RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 FAM240AA0A1B0GVK7 77 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 A0A1W2PRE2 83 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 CRYGCP07315 174 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 PCP4P48539 62 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 UBE2E1P51965 193 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 LINC01620Q4KN68 170 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 C9orf66Q5T8R8 295 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 TREML4Q6UXN2 200 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 Q6ZT83 130 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 Q8N2B8 174 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 LINC00311Q8N616 119 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 Q9HAA7 133 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 A0A0U1RQV1 116 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 PRSS47A8MTI9 375 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 NXPH4O95158 308 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 UMODP07911 640 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 PFN2P35080 140 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 RPS27P42677 84 aaKnown RBP1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 CRIP1P50238 77 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 PRR4Q16378 134 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 FAM222AQ5U5X8 452 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 TMEM14EPQ6UXP3 125 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 AMN1Q8IY45 258 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 EXOC3-AS1Q8N2X6 119 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 RNF125Q96EQ8 232 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 Q96M66 194 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 NAA38Q9BRA0 125 aaKnown RBP1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 HIGD2AQ9BW72 106 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 NDUFA4L2Q9NRX3 87 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 LRCOL1A6NCL2 159 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 RPL35AP18077 110 aaKnown RBP1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 HSD52Q0P140 79 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 CLEC19AQ6UXS0 136 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 Q6ZVQ6 151 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 BOD1L2Q8IYS8 172 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 LINC01356Q8N9X3 169 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 FAM110AQ9BQ89 295 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 CNFNQ9BYD5 112 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 SNURFQ9Y675 71 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 ICOSQ9Y6W8 199 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 A0A1W2PPR1 153 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 A0A1W2PR80 420 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 F8W1H4 67 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 LINC01619G3V211 115 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 GAGE7O76087 117 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 NDUFB4O95168 129 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 IGHV3-13P01766 116 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 IGHV3-7P01780 117 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 IGHV4-39P01824 125 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 GAGE12FP0CL80 117 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 GAGE12GP0CL81 117 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 GAGE12IP0CL82 117 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 HLA-DMBP28068 263 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 ZNF138P52744 262 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 UBE2D2P62837 147 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 LOXL1Q08397 574 aaPredicted RBP1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 MUC21Q5SSG8 566 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 MRPL53Q96EL3 112 aaKnown RBP1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 LINC00312Q9Y6C7 94 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 A0A087WZ39 114 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 IGHV3-49A0A0A0MS15 119 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 IGHV3-21A0A0B4J1V1 117 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 DNAJC9-AS1A6NH13 148 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 C17orf100A8MU93 164 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 H3BUX3 64 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 SPRY1O43609 319 aaPredicted RBP1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 NPSP0C0P6 89 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 DDTP30046 118 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 RNASE4P34096 147 aaKnown RBP1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 FOXA3P55318 350 aaPredicted RBP1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 GFERP55789 205 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 DEFB131AP59861 70 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 HIKESHIQ53FT3 197 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 C1orf194Q5T5A4 169 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 APRG1Q8IVJ8 170 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 BCL6BQ8N143 479 aaPredicted RBP1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 CCL28Q9NRJ3 127 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 SIGLEC9Q9Y336 463 aa1.27□□□□□ -2.21
TRAPPC13-211ENST00000512009 TRAV40A0A0B4J280 105 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 A0A0J9YW62 118 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 C19orf71A6NCJ1 209 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 BPY2O14599 106 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 REG3GQ6UW15 175 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 ADAMTSL5Q6ZMM2 481 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 DAZ4Q86SG3 579 aaKnown RBP1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 ORMDL1Q9P0S3 153 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 LINC00474Q9P2X8 69 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 XCL2Q9UBD3 114 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 A0A1W2PRS3 328 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 A8MTW9 85 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 ZG16O60844 167 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 SFTA3P0C7M3 94 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 CCL4P13236 92 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 PPIFP30405 207 aaKnown RBP1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 Q0VG73 95 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 OTPQ5XKR4 325 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 ZNF645Q8N7E2 425 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 PRR25Q96S07 402 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 LITAFQ99732 161 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 RHPN1-AS1Q9BWJ2 59 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms