RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 MT1HP80294 61 aa2.23□□□□□ -2.05
RNF4-211ENST00000509206 MRPS10P82664 201 aaKnown RBP2.23□□□□□ -2.05
RNF4-211ENST00000509206 NEDD8Q15843 81 aa2.23□□□□□ -2.05
RNF4-211ENST00000509206 GCSAMLQ5JQS6 135 aa2.23□□□□□ -2.05
RNF4-211ENST00000509206 NTM-AS1Q6ZSK4 140 aa2.23□□□□□ -2.05
RNF4-211ENST00000509206 PRNTQ86SH4 94 aa2.23□□□□□ -2.05
RNF4-211ENST00000509206 ZFP82Q8N141 532 aa2.23□□□□□ -2.05
RNF4-211ENST00000509206 LINC00304Q8N9R0 145 aa2.23□□□□□ -2.05
RNF4-211ENST00000509206 C20orf203Q8NBC4 194 aa2.23□□□□□ -2.05
RNF4-211ENST00000509206 MCFD2Q8NI22 146 aa2.23□□□□□ -2.05
RNF4-211ENST00000509206 AP3S1Q92572 193 aa2.23□□□□□ -2.05
RNF4-211ENST00000509206 TVP23CQ96ET8 276 aa2.23□□□□□ -2.05
RNF4-211ENST00000509206 TMEM243Q9BU79 118 aa2.23□□□□□ -2.05
RNF4-211ENST00000509206 MRPS26Q9BYN8 205 aaKnown RBP2.23□□□□□ -2.05
RNF4-211ENST00000509206 IL36BQ9NZH7 164 aa2.23□□□□□ -2.05
RNF4-211ENST00000509206 MBD2Q9UBB5 411 aa2.23□□□□□ -2.05
RNF4-211ENST00000509206 PSG8Q9UQ74 426 aa2.23□□□□□ -2.05
RNF4-211ENST00000509206 SSPOA2VEC9 5147 aa2.23□□□□□ -2.05
RNF4-211ENST00000509206 IGLV4-60A0A075B6I1 120 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 GRIFINA4D1Z8 144 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 FABP5P3A8MUU1 101 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 B4DEV8 164 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 ZNF861PO60384 105 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 SMIM17P0DL12 118 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 BCL2P10415 239 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 PVALBP20472 110 aaPredicted RBP2.22□□□□□ -2.05
RNF4-211ENST00000509206 S100A11P31949 105 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 FAUP35544 74 aaKnown RBP2.22□□□□□ -2.05
RNF4-211ENST00000509206 ZNF80P51504 273 aaPredicted RBP2.22□□□□□ -2.05
RNF4-211ENST00000509206 TAS2R45P59539 299 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 HBG1P69891 147 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 HBG2P69892 147 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 IL18Q14116 193 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 IQCJQ1A5X6 159 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 SAPCD1Q5SSQ6 148 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 AMMECR1LQ6DCA0 310 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 PRAC1Q96KF2 57 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 FAM167A-AS1Q96KT0 104 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 C2orf48Q96LS8 159 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 CAMK2N2Q96S95 79 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 KRTAP4-1Q9BYQ7 146 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 VCX3BQ9H321 246 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 RPP21Q9H633 154 aaKnown RBP2.22□□□□□ -2.05
RNF4-211ENST00000509206 NDUFA13Q9P0J0 144 aa2.22□□□□□ -2.05
RNF4-211ENST00000509206 USH2AO75445 5202 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 IGLV4-69A0A075B6H9 119 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 IGKV2D-26A0A0A0MRZ7 120 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 IGKV3D-20A0A0C4DH25 116 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 SERTM2A0A1B0GWG4 89 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 C7orf66A4D0T2 115 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 C17orf112F2Z3M2 114 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 M0R036 132 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 RGS5O15539 181 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 APOMO95445 188 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 XCL1P47992 114 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 HERV-K104P63124 156 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 GNG5P63218 68 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 PPP1R1AQ13522 171 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 ATP6V1FQ16864 119 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 KHDC3LQ587J8 217 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 RNASEKQ6P5S7 137 aaKnown RBP2.21□□□□□ -2.06
RNF4-211ENST00000509206 COX6B2Q6YFQ2 88 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 FAM19A5Q7Z5A7 132 aaPredicted RBP2.21□□□□□ -2.06
RNF4-211ENST00000509206 STX12Q86Y82 276 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 NPCDR1Q9BY65 106 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 KCNIP2Q9NS61 270 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 LINC00846Q9NV44 126 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 UBE2D4Q9Y2X8 147 aa2.21□□□□□ -2.06
RNF4-211ENST00000509206 LSM5Q9Y4Y9 91 aaKnown RBP2.21□□□□□ -2.06
RNF4-211ENST00000509206 A0A087X002 238 aa2.2□□□□□ -2.06
RNF4-211ENST00000509206 TMSB15BA0A087X1C1 80 aa2.2□□□□□ -2.06
RNF4-211ENST00000509206 FAM25EA8MYX2 175 aa2.2□□□□□ -2.06
RNF4-211ENST00000509206 SULT1A1P50225 295 aa2.2□□□□□ -2.06
RNF4-211ENST00000509206 SSTP61278 116 aa2.2□□□□□ -2.06
RNF4-211ENST00000509206 VBP1P61758 197 aa2.2□□□□□ -2.06
RNF4-211ENST00000509206 FLI1Q01543 452 aaPredicted RBP2.2□□□□□ -2.06
RNF4-211ENST00000509206 SS18Q15532 418 aa2.2□□□□□ -2.06
RNF4-211ENST00000509206 Q6ZVQ6 151 aa2.2□□□□□ -2.06
RNF4-211ENST00000509206 FP248Q71RG6 208 aaPredicted RBP2.2□□□□□ -2.06
RNF4-211ENST00000509206 OR5A1Q8NGJ0 315 aa2.2□□□□□ -2.06
RNF4-211ENST00000509206 SMIM4Q8WVI0 70 aa2.2□□□□□ -2.06
RNF4-211ENST00000509206 BTF3L4Q96K17 158 aa2.2□□□□□ -2.06
RNF4-211ENST00000509206 OPRPNQ99935 248 aaPredicted RBP2.2□□□□□ -2.06
RNF4-211ENST00000509206 ZNF471Q9BX82 626 aaPredicted RBP2.2□□□□□ -2.06
RNF4-211ENST00000509206 VCX3AQ9NNX9 186 aa2.2□□□□□ -2.06
RNF4-211ENST00000509206 FLVCR2Q9UPI3 526 aa2.2□□□□□ -2.06
RNF4-211ENST00000509206 FCGBPQ9Y6R7 5405 aaPredicted RBP2.2□□□□□ -2.06
RNF4-211ENST00000509206 A0A1W2PPV4 95 aa2.19□□□□□ -2.06
RNF4-211ENST00000509206 ANKRD20A5PA0PJZ0 165 aa2.19□□□□□ -2.06
RNF4-211ENST00000509206 C19orf71A6NCJ1 209 aa2.19□□□□□ -2.06
RNF4-211ENST00000509206 M0QXV9 152 aa2.19□□□□□ -2.06
RNF4-211ENST00000509206 CCL25O15444 150 aa2.19□□□□□ -2.06
RNF4-211ENST00000509206 TCRAP04437 139 aa2.19□□□□□ -2.06
RNF4-211ENST00000509206 RPL12P30050 165 aaKnown RBP2.19□□□□□ -2.06
RNF4-211ENST00000509206 RPL28P46779 137 aaKnown RBP2.19□□□□□ -2.06
RNF4-211ENST00000509206 TMBIM6P55061 237 aa2.19□□□□□ -2.06
RNF4-211ENST00000509206 AP3S2P59780 193 aa2.19□□□□□ -2.06
RNF4-211ENST00000509206 CTAG1AP78358 180 aa2.19□□□□□ -2.06
RNF4-211ENST00000509206 COTL1Q14019 142 aa2.19□□□□□ -2.06
RNF4-211ENST00000509206 SPANXN1Q5VSR9 72 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms