RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 MORN3Q6PF18 240 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-207ENST00000507401 STHQ8IWL8 128 aa5.84□□□□□ -1.47
SCN1A-207ENST00000507401 GLMPQ8WWB7 406 aa5.84□□□□□ -1.47
SCN1A-207ENST00000507401 LINC00479Q96M42 142 aa5.84□□□□□ -1.47
SCN1A-207ENST00000507401 CNFNQ9BYD5 112 aa5.84□□□□□ -1.47
SCN1A-207ENST00000507401 Q9H3A6 140 aa5.84□□□□□ -1.47
SCN1A-207ENST00000507401 PSG8Q9UQ74 426 aa5.84□□□□□ -1.47
SCN1A-207ENST00000507401 KLK5Q9Y337 293 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-207ENST00000507401 ZNF688P0C7X2 276 aa5.83□□□□□ -1.48
SCN1A-207ENST00000507401 PYYP10082 97 aa5.83□□□□□ -1.48
SCN1A-207ENST00000507401 CKS2P33552 79 aa5.83□□□□□ -1.48
SCN1A-207ENST00000507401 IFI27P40305 119 aaPredicted RBP5.83□□□□□ -1.48
SCN1A-207ENST00000507401 SNRPD3P62318 126 aaKnown RBP5.83□□□□□ -1.48
SCN1A-207ENST00000507401 PAPPA-AS1Q5QFB9 102 aa5.83□□□□□ -1.48
SCN1A-207ENST00000507401 PATE2Q6UY27 113 aa5.83□□□□□ -1.48
SCN1A-207ENST00000507401 TRPT1Q86TN4 253 aaKnown RBP5.83□□□□□ -1.48
SCN1A-207ENST00000507401 RNF125Q96EQ8 232 aa5.83□□□□□ -1.48
SCN1A-207ENST00000507401 CDIP1Q9H305 208 aa5.83□□□□□ -1.48
SCN1A-207ENST00000507401 C11orf68Q9H3H3 251 aaKnown RBP5.83□□□□□ -1.48
SCN1A-207ENST00000507401 HHLA3Q9XRX5 114 aa5.83□□□□□ -1.48
SCN1A-207ENST00000507401 HIGD1AQ9Y241 93 aa5.83□□□□□ -1.48
SCN1A-207ENST00000507401 IGKV1D-37A0A075B6S9 117 aa5.82□□□□□ -1.48
SCN1A-207ENST00000507401 TRBV7-9A0A0J9YWB2 115 aa5.82□□□□□ -1.48
SCN1A-207ENST00000507401 A8MWV9 139 aa5.82□□□□□ -1.48
SCN1A-207ENST00000507401 D6R8Y8 96 aa5.82□□□□□ -1.48
SCN1A-207ENST00000507401 RHODO00212 210 aa5.82□□□□□ -1.48
SCN1A-207ENST00000507401 NCR2O95944 276 aa5.82□□□□□ -1.48
SCN1A-207ENST00000507401 GIG44P09565 113 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-207ENST00000507401 ARMS2P0C7Q2 107 aa5.82□□□□□ -1.48
SCN1A-207ENST00000507401 GAGE2BQ13066 116 aa5.82□□□□□ -1.48
SCN1A-207ENST00000507401 GAGE2EQ4V326 116 aa5.82□□□□□ -1.48
SCN1A-207ENST00000507401 SIGLEC15Q6ZMC9 328 aa5.82□□□□□ -1.48
SCN1A-207ENST00000507401 PCP2Q8IVA1 136 aa5.82□□□□□ -1.48
SCN1A-207ENST00000507401 C11orf45Q8TAV5 145 aa5.82□□□□□ -1.48
SCN1A-207ENST00000507401 HIST1H4GQ99525 98 aa5.82□□□□□ -1.48
SCN1A-207ENST00000507401 GAGE2DQ9UEU5 116 aa5.82□□□□□ -1.48
SCN1A-207ENST00000507401 HYDINQ4G0P3 5121 aa5.82□□□□□ -1.48
SCN1A-207ENST00000507401 TRAV5A0A0B4J249 113 aa5.81□□□□□ -1.48
SCN1A-207ENST00000507401 MYMXA0A1B0GTQ4 84 aa5.81□□□□□ -1.48
SCN1A-207ENST00000507401 SNAI2O43623 268 aa5.81□□□□□ -1.48
SCN1A-207ENST00000507401 MIFP14174 115 aa5.81□□□□□ -1.48
SCN1A-207ENST00000507401 KRTAP10-2P60368 255 aa5.81□□□□□ -1.48
SCN1A-207ENST00000507401 Q8N8P6 123 aa5.81□□□□□ -1.48
SCN1A-207ENST00000507401 CSNK1G2-AS1Q8NCQ2 148 aa5.81□□□□□ -1.48
SCN1A-207ENST00000507401 LINC00476Q8WZB0 136 aa5.81□□□□□ -1.48
SCN1A-207ENST00000507401 TP73-AS1Q9UF72 201 aa5.81□□□□□ -1.48
SCN1A-207ENST00000507401 AGRNO00468 2067 aa5.81□□□□□ -1.48
SCN1A-207ENST00000507401 TRBV7-3A0A075B6L6 115 aa5.8□□□□□ -1.48
SCN1A-207ENST00000507401 A0A087WX48 190 aa5.8□□□□□ -1.48
SCN1A-207ENST00000507401 H3BMM0 161 aa5.8□□□□□ -1.48
SCN1A-207ENST00000507401 SNCGO76070 127 aa5.8□□□□□ -1.48
SCN1A-207ENST00000507401 PPP1R17O96001 155 aa5.8□□□□□ -1.48
SCN1A-207ENST00000507401 NPYP01303 97 aa5.8□□□□□ -1.48
SCN1A-207ENST00000507401 IGLV2-11P01706 119 aa5.8□□□□□ -1.48
SCN1A-207ENST00000507401 PRSS1P07477 247 aa5.8□□□□□ -1.48
SCN1A-207ENST00000507401 SCGB1C2P0DMR2 95 aa5.8□□□□□ -1.48
SCN1A-207ENST00000507401 ID1P41134 155 aa5.8□□□□□ -1.48
SCN1A-207ENST00000507401 UBE2D3P61077 147 aa5.8□□□□□ -1.48
SCN1A-207ENST00000507401 UBE2D2P62837 147 aa5.8□□□□□ -1.48
SCN1A-207ENST00000507401 GNG5P63218 68 aa5.8□□□□□ -1.48
SCN1A-207ENST00000507401 MRPL51Q4U2R6 128 aaKnown RBP5.8□□□□□ -1.48
SCN1A-207ENST00000507401 TTC32Q5I0X7 151 aa5.8□□□□□ -1.48
SCN1A-207ENST00000507401 AMN1Q8IY45 258 aa5.8□□□□□ -1.48
SCN1A-207ENST00000507401 OR10J6PQ8NGY7 276 aa5.8□□□□□ -1.48
SCN1A-207ENST00000507401 AAMDCQ9H7C9 122 aa5.8□□□□□ -1.48
SCN1A-207ENST00000507401 TRBV19A0A075B6N1 114 aa5.79□□□□□ -1.48
SCN1A-207ENST00000507401 KNCNA6PVL3 124 aa5.79□□□□□ -1.48
SCN1A-207ENST00000507401 H7C1H1 209 aa5.79□□□□□ -1.48
SCN1A-207ENST00000507401 ATP5G1P05496 136 aa5.79□□□□□ -1.48
SCN1A-207ENST00000507401 IFITM1P13164 125 aa5.79□□□□□ -1.48
SCN1A-207ENST00000507401 UBE2D1P51668 147 aa5.79□□□□□ -1.48
SCN1A-207ENST00000507401 ZNF138P52744 262 aa5.79□□□□□ -1.48
SCN1A-207ENST00000507401 ORMDL2Q53FV1 153 aa5.79□□□□□ -1.48
SCN1A-207ENST00000507401 ZC2HC1BQ5TFG8 222 aa5.79□□□□□ -1.48
SCN1A-207ENST00000507401 SH2D6Q7Z4S9 175 aa5.79□□□□□ -1.48
SCN1A-207ENST00000507401 PRNTQ86SH4 94 aa5.79□□□□□ -1.48
SCN1A-207ENST00000507401 Q8NAQ8 132 aa5.79□□□□□ -1.48
SCN1A-207ENST00000507401 SPXQ9BT56 116 aa5.79□□□□□ -1.48
SCN1A-207ENST00000507401 TNFRSF18Q9Y5U5 241 aa5.79□□□□□ -1.48
SCN1A-207ENST00000507401 X6R8D5 127 aa5.79□□□□□ -1.48
SCN1A-207ENST00000507401 EPPK1P58107 5090 aaKnown RBP5.79□□□□□ -1.48
SCN1A-207ENST00000507401 ALMS1Q8TCU4 4167 aa5.78□□□□□ -1.48
SCN1A-207ENST00000507401 FAM240AA0A1B0GVK7 77 aa5.78□□□□□ -1.48
SCN1A-207ENST00000507401 SMIM9A6NGZ8 99 aa5.78□□□□□ -1.48
SCN1A-207ENST00000507401 FABP5P3A8MUU1 101 aa5.78□□□□□ -1.48
SCN1A-207ENST00000507401 F8VRH5 84 aa5.78□□□□□ -1.48
SCN1A-207ENST00000507401 SOCS3O14543 225 aa5.78□□□□□ -1.48
SCN1A-207ENST00000507401 LY6G6CO95867 125 aa5.78□□□□□ -1.48
SCN1A-207ENST00000507401 RBMY1A1P0DJD3 496 aaKnown RBP5.78□□□□□ -1.48
SCN1A-207ENST00000507401 RBMY1CP0DJD4 496 aa5.78□□□□□ -1.48
SCN1A-207ENST00000507401 ORM2P19652 201 aa5.78□□□□□ -1.48
SCN1A-207ENST00000507401 NDUFV3P56181 108 aaKnown RBP5.78□□□□□ -1.48
SCN1A-207ENST00000507401 NANOS2P60321 138 aaKnown RBP5.78□□□□□ -1.48
SCN1A-207ENST00000507401 HERVK_113P61574 105 aa5.78□□□□□ -1.48
SCN1A-207ENST00000507401 LYZP61626 148 aa5.78□□□□□ -1.48
SCN1A-207ENST00000507401 RPL32P62910 135 aaKnown RBP5.78□□□□□ -1.48
SCN1A-207ENST00000507401 RBMY1FQ15415 496 aaKnown RBP5.78□□□□□ -1.48
SCN1A-207ENST00000507401 MORN5Q5VZ52 161 aa5.78□□□□□ -1.48
SCN1A-207ENST00000507401 GOLT1AQ6ZVE7 132 aa5.78□□□□□ -1.48
SCN1A-207ENST00000507401 ZC2HC1AQ96GY0 325 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms