RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 PRSS47A8MTI9 375 aa7.43□□□□□ -1.22
SNCA-210ENST00000506691 I3L3M4 83 aa7.43□□□□□ -1.22
SNCA-210ENST00000506691 APCSP02743 223 aa7.43□□□□□ -1.22
SNCA-210ENST00000506691 POLR2KP53803 58 aaKnown RBP7.43□□□□□ -1.22
SNCA-210ENST00000506691 SUMO2P61956 95 aaKnown RBP7.43□□□□□ -1.22
SNCA-210ENST00000506691 COTL1Q14019 142 aa7.43□□□□□ -1.22
SNCA-210ENST00000506691 ATRAIDQ6UW56 229 aa7.43□□□□□ -1.22
SNCA-210ENST00000506691 MAPKAPK5-AS1Q8N8E1 139 aa7.43□□□□□ -1.22
SNCA-210ENST00000506691 CHCHD7Q9BUK0 85 aa7.43□□□□□ -1.22
SNCA-210ENST00000506691 Q9H8V8 135 aa7.43□□□□□ -1.22
SNCA-210ENST00000506691 TRBV25-1A0A075B6N4 114 aa7.42□□□□□ -1.22
SNCA-210ENST00000506691 IGHV1-24A0A0C4DH33 117 aa7.42□□□□□ -1.22
SNCA-210ENST00000506691 C16orf90A8MZG2 172 aa7.42□□□□□ -1.22
SNCA-210ENST00000506691 D6R8Y8 96 aa7.42□□□□□ -1.22
SNCA-210ENST00000506691 M0R2N4 97 aa7.42□□□□□ -1.22
SNCA-210ENST00000506691 SIVA1O15304 175 aa7.42□□□□□ -1.22
SNCA-210ENST00000506691 TNFRSF6BO95407 300 aa7.42□□□□□ -1.22
SNCA-210ENST00000506691 PMCHP20382 165 aa7.42□□□□□ -1.22
SNCA-210ENST00000506691 IQCJQ1A5X6 159 aa7.42□□□□□ -1.22
SNCA-210ENST00000506691 TTC32Q5I0X7 151 aa7.42□□□□□ -1.22
SNCA-210ENST00000506691 NRACQ8N912 160 aa7.42□□□□□ -1.22
SNCA-210ENST00000506691 PRELID3AQ96N28 172 aa7.42□□□□□ -1.22
SNCA-210ENST00000506691 KIR2DL4Q99706 377 aa7.42□□□□□ -1.22
SNCA-210ENST00000506691 TMEM70Q9BUB7 260 aa7.42□□□□□ -1.22
SNCA-210ENST00000506691 LRP1BQ9NZR2 4599 aa7.41□□□□□ -1.22
SNCA-210ENST00000506691 IGHV3-38A0A0C4DH36 116 aa7.41□□□□□ -1.22
SNCA-210ENST00000506691 H7C423 109 aa7.41□□□□□ -1.22
SNCA-210ENST00000506691 K7EMI3 77 aa7.41□□□□□ -1.22
SNCA-210ENST00000506691 DNAH10OSP0CZ25 163 aa7.41□□□□□ -1.22
SNCA-210ENST00000506691 SMAGPQ0VAQ4 97 aa7.41□□□□□ -1.22
SNCA-210ENST00000506691 C10orf126Q8N4M7 172 aa7.41□□□□□ -1.22
SNCA-210ENST00000506691 RPL39LQ96EH5 51 aaKnown RBP7.41□□□□□ -1.22
SNCA-210ENST00000506691 YPEL4Q96NS1 127 aa7.41□□□□□ -1.22
SNCA-210ENST00000506691 TGIF2-C20orf24A0A0A6YYL0 155 aa7.4□□□□□ -1.22
SNCA-210ENST00000506691 RPS10P46783 165 aaKnown RBP7.4□□□□□ -1.22
SNCA-210ENST00000506691 FABP9Q0Z7S8 132 aa7.4□□□□□ -1.22
SNCA-210ENST00000506691 LINC01556Q5JQF7 62 aa7.4□□□□□ -1.22
SNCA-210ENST00000506691 MAP1LC3AQ9H492 121 aa7.4□□□□□ -1.22
SNCA-210ENST00000506691 TRAPPC1Q9Y5R8 145 aa7.4□□□□□ -1.22
SNCA-210ENST00000506691 SMKR1H3BMG3 65 aa7.39□□□□□ -1.23
SNCA-210ENST00000506691 G0S2P27469 103 aa7.39□□□□□ -1.23
SNCA-210ENST00000506691 TMEM18Q96B42 140 aa7.39□□□□□ -1.23
SNCA-210ENST00000506691 TMEM243Q9BU79 118 aa7.39□□□□□ -1.23
SNCA-210ENST00000506691 MRPL18Q9H0U6 180 aaKnown RBP7.39□□□□□ -1.23
SNCA-210ENST00000506691 IGLV2-18A0A075B6J9 118 aa7.38□□□□□ -1.23
SNCA-210ENST00000506691 A0A087WX48 190 aa7.38□□□□□ -1.23
SNCA-210ENST00000506691 GAS8-AS1O95177 125 aa7.38□□□□□ -1.23
SNCA-210ENST00000506691 RAB5AP20339 215 aa7.38□□□□□ -1.23
SNCA-210ENST00000506691 FCER1GP30273 86 aa7.38□□□□□ -1.23
SNCA-210ENST00000506691 AMTP48728 403 aa7.38□□□□□ -1.23
SNCA-210ENST00000506691 NTM-AS1Q6ZSK4 140 aa7.38□□□□□ -1.23
SNCA-210ENST00000506691 NIT1Q86X76 327 aa7.38□□□□□ -1.23
SNCA-210ENST00000506691 CBLN2Q8IUK8 224 aa7.38□□□□□ -1.23
SNCA-210ENST00000506691 C6orf223Q8N319 242 aa7.38□□□□□ -1.23
SNCA-210ENST00000506691 SMIM2Q9BVW6 85 aa7.38□□□□□ -1.23
SNCA-210ENST00000506691 NXT2Q9NPJ8 142 aaKnown RBP7.38□□□□□ -1.23
SNCA-210ENST00000506691 NBDYA0A0U1RRE5 68 aa7.37□□□□□ -1.23
SNCA-210ENST00000506691 A0A1B0GUV1 79 aa7.37□□□□□ -1.23
SNCA-210ENST00000506691 TMEM262E9PQX1 116 aa7.37□□□□□ -1.23
SNCA-210ENST00000506691 UBE2L6O14933 153 aa7.37□□□□□ -1.23
SNCA-210ENST00000506691 ATP6V1G1O75348 118 aa7.37□□□□□ -1.23
SNCA-210ENST00000506691 NPYP01303 97 aa7.37□□□□□ -1.23
SNCA-210ENST00000506691 CHCHD5Q9BSY4 110 aa7.37□□□□□ -1.23
SNCA-210ENST00000506691 ALKBH7Q9BT30 221 aaPredicted RBP7.37□□□□□ -1.23
SNCA-210ENST00000506691 APOBP04114 4563 aaKnown RBP7.36□□□□□ -1.23
SNCA-210ENST00000506691 LINC01549A6NIU2 74 aa7.36□□□□□ -1.23
SNCA-210ENST00000506691 COLCA2A8K830 154 aa7.36□□□□□ -1.23
SNCA-210ENST00000506691 ESDP10768 282 aa7.36□□□□□ -1.23
SNCA-210ENST00000506691 TNP2Q05952 138 aa7.36□□□□□ -1.23
SNCA-210ENST00000506691 LAGE3Q14657 143 aa7.36□□□□□ -1.23
SNCA-210ENST00000506691 NFE4Q86UQ8 179 aa7.36□□□□□ -1.23
SNCA-210ENST00000506691 WFDC10BQ8IUB3 73 aa7.36□□□□□ -1.23
SNCA-210ENST00000506691 Q8N8P6 123 aa7.36□□□□□ -1.23
SNCA-210ENST00000506691 IBA57-AS1B1ANH7 110 aa7.35□□□□□ -1.23
SNCA-210ENST00000506691 TSHBP01222 138 aa7.35□□□□□ -1.23
SNCA-210ENST00000506691 ZNF25P17030 456 aaPredicted RBP7.35□□□□□ -1.23
SNCA-210ENST00000506691 RAB5BP61020 215 aa7.35□□□□□ -1.23
SNCA-210ENST00000506691 KIAA1644Q3SXP7 199 aa7.35□□□□□ -1.23
SNCA-210ENST00000506691 ORMDL2Q53FV1 153 aa7.35□□□□□ -1.23
SNCA-210ENST00000506691 PRSS3P2Q8NHM4 247 aa7.35□□□□□ -1.23
SNCA-210ENST00000506691 HERC1Q15751 4861 aa7.34□□□□□ -1.23
SNCA-210ENST00000506691 TRAV8-3A0A0A6YYJ7 113 aa7.34□□□□□ -1.23
SNCA-210ENST00000506691 Q0VG73 95 aa7.34□□□□□ -1.23
SNCA-210ENST00000506691 CSDC2Q9Y534 153 aaKnown RBP7.34□□□□□ -1.23
SNCA-210ENST00000506691 LOC389332A0A1B0GUA5 103 aa7.33□□□□□ -1.24
SNCA-210ENST00000506691 AMMECR1LQ6DCA0 310 aa7.33□□□□□ -1.24
SNCA-210ENST00000506691 MRPL52Q86TS9 123 aaKnown RBP7.33□□□□□ -1.24
SNCA-210ENST00000506691 TMEM101Q96IK0 257 aa7.33□□□□□ -1.24
SNCA-210ENST00000506691 TIMM21Q9BVV7 248 aa7.33□□□□□ -1.24
SNCA-210ENST00000506691 COX11Q9Y6N1 276 aa7.33□□□□□ -1.24
SNCA-210ENST00000506691 DNAH5Q8TE73 4624 aa7.32□□□□□ -1.24
SNCA-210ENST00000506691 DMBT1Q9UGM3 2413 aaPredicted RBP7.32□□□□□ -1.24
SNCA-210ENST00000506691 LINC01546A6NGU7 62 aa7.32□□□□□ -1.24
SNCA-210ENST00000506691 IFI27P40305 119 aaPredicted RBP7.32□□□□□ -1.24
SNCA-210ENST00000506691 RBX1P62877 108 aa7.32□□□□□ -1.24
SNCA-210ENST00000506691 GAGE6Q13070 117 aa7.32□□□□□ -1.24
SNCA-210ENST00000506691 C20orf203Q8NBC4 194 aa7.32□□□□□ -1.24
SNCA-210ENST00000506691 RMI2Q96E14 147 aa7.32□□□□□ -1.24
SNCA-210ENST00000506691 IGHV3-30P01768 117 aa7.31□□□□□ -1.24
SNCA-210ENST00000506691 IGHV3-33P01772 117 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms