RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 CEBPGP53567 150 aa10.84□□□□□ -0.67
PDLIM7-215ENST00000506161 KRTAP10-4P60372 401 aaPredicted RBP10.84□□□□□ -0.67
PDLIM7-215ENST00000506161 TMEM97Q5BJF2 176 aa10.84□□□□□ -0.67
PDLIM7-215ENST00000506161 H7C1H1 209 aa10.83□□□□□ -0.68
PDLIM7-215ENST00000506161 GATCO43716 136 aaKnown RBP10.83□□□□□ -0.68
PDLIM7-215ENST00000506161 MIAQ16674 131 aa10.83□□□□□ -0.68
PDLIM7-215ENST00000506161 FAM231DQ6ZW35 169 aa10.83□□□□□ -0.68
PDLIM7-215ENST00000506161 LINC00528Q8N1L1 170 aa10.83□□□□□ -0.68
PDLIM7-215ENST00000506161 PGLYRP4Q96LB8 373 aa10.83□□□□□ -0.68
PDLIM7-215ENST00000506161 SRP19P09132 144 aaKnown RBP10.82□□□□□ -0.68
PDLIM7-215ENST00000506161 REG3AQ06141 175 aa10.82□□□□□ -0.68
PDLIM7-215ENST00000506161 SERTAD4-AS1Q5TG53 156 aa10.82□□□□□ -0.68
PDLIM7-215ENST00000506161 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.82□□□□□ -0.68
PDLIM7-215ENST00000506161 TMEM243Q9BU79 118 aa10.82□□□□□ -0.68
PDLIM7-215ENST00000506161 PANO1I0J062 215 aa10.81□□□□□ -0.68
PDLIM7-215ENST00000506161 CIRBP-AS1Q8TBR5 109 aa10.81□□□□□ -0.68
PDLIM7-215ENST00000506161 FAM210AQ96ND0 272 aa10.81□□□□□ -0.68
PDLIM7-215ENST00000506161 C9JQL5 133 aa10.8□□□□□ -0.68
PDLIM7-215ENST00000506161 LINC01551Q86U37 167 aa10.8□□□□□ -0.68
PDLIM7-215ENST00000506161 A0A1B0GUV1 79 aa10.79□□□□□ -0.68
PDLIM7-215ENST00000506161 PKIAP61925 76 aa10.79□□□□□ -0.68
PDLIM7-215ENST00000506161 SMIM7Q9BQ49 75 aa10.79□□□□□ -0.68
PDLIM7-215ENST00000506161 CHAC1Q9BUX1 264 aa10.79□□□□□ -0.68
PDLIM7-215ENST00000506161 HMCN2Q8NDA2 5059 aa10.78□□□□□ -0.68
PDLIM7-215ENST00000506161 SLPIP03973 132 aa10.78□□□□□ -0.68
PDLIM7-215ENST00000506161 AMTP48728 403 aa10.78□□□□□ -0.68
PDLIM7-215ENST00000506161 SRSF3P84103 164 aaKnown RBP10.78□□□□□ -0.68
PDLIM7-215ENST00000506161 RNF185Q96GF1 192 aa10.78□□□□□ -0.68
PDLIM7-215ENST00000506161 EIF5A2Q9GZV4 153 aaKnown RBP10.78□□□□□ -0.68
PDLIM7-215ENST00000506161 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.77□□□□□ -0.69
PDLIM7-215ENST00000506161 IGKV2-29A2NJV5 120 aaPredicted RBP10.77□□□□□ -0.69
PDLIM7-215ENST00000506161 KRTAP29-1A8MX34 341 aaPredicted RBP10.77□□□□□ -0.69
PDLIM7-215ENST00000506161 COTL1Q14019 142 aa10.77□□□□□ -0.69
PDLIM7-215ENST00000506161 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.77□□□□□ -0.69
PDLIM7-215ENST00000506161 FAM231BA6NCW3 169 aa10.76□□□□□ -0.69
PDLIM7-215ENST00000506161 A8MWL6 223 aa10.76□□□□□ -0.69
PDLIM7-215ENST00000506161 RPS10P46783 165 aaKnown RBP10.76□□□□□ -0.69
PDLIM7-215ENST00000506161 CT83Q5H943 113 aa10.76□□□□□ -0.69
PDLIM7-215ENST00000506161 V9GYV3 84 aa10.76□□□□□ -0.69
PDLIM7-215ENST00000506161 SDHAF1A6NFY7 115 aa10.75□□□□□ -0.69
PDLIM7-215ENST00000506161 ZNF727A8MUV8 499 aa10.75□□□□□ -0.69
PDLIM7-215ENST00000506161 HIGD1CA8MV81 97 aa10.75□□□□□ -0.69
PDLIM7-215ENST00000506161 C14orf177Q52M58 125 aa10.75□□□□□ -0.69
PDLIM7-215ENST00000506161 C9orf163Q8N9P6 203 aa10.75□□□□□ -0.69
PDLIM7-215ENST00000506161 TSKUQ8WUA8 353 aa10.74□□□□□ -0.69
PDLIM7-215ENST00000506161 OSTCQ9NRP0 149 aa10.74□□□□□ -0.69
PDLIM7-215ENST00000506161 PKHD1L1Q86WI1 4243 aa10.73□□□□□ -0.69
PDLIM7-215ENST00000506161 IGKV3OR2-268A0A0C4DH90 116 aa10.73□□□□□ -0.69
PDLIM7-215ENST00000506161 SMKR1H3BMG3 65 aa10.73□□□□□ -0.69
PDLIM7-215ENST00000506161 NDUFS6O75380 124 aaKnown RBP10.73□□□□□ -0.69
PDLIM7-215ENST00000506161 SDIM1Q6ZPB5 146 aa10.73□□□□□ -0.69
PDLIM7-215ENST00000506161 AMN1Q8IY45 258 aa10.73□□□□□ -0.69
PDLIM7-215ENST00000506161 C15orf56Q8N910 161 aa10.73□□□□□ -0.69
PDLIM7-215ENST00000506161 ISOC2Q96AB3 205 aa10.73□□□□□ -0.69
PDLIM7-215ENST00000506161 UBE2L6O14933 153 aa10.72□□□□□ -0.69
PDLIM7-215ENST00000506161 TSHBP01222 138 aa10.72□□□□□ -0.69
PDLIM7-215ENST00000506161 RAB4AP20338 218 aa10.72□□□□□ -0.69
PDLIM7-215ENST00000506161 RPL23P62829 140 aaKnown RBP10.72□□□□□ -0.69
PDLIM7-215ENST00000506161 LRP1Q07954 4544 aaKnown RBP10.72□□□□□ -0.69
PDLIM7-215ENST00000506161 TRAV8-4A0A0B4J246 113 aa10.71□□□□□ -0.69
PDLIM7-215ENST00000506161 TRBV6-5A0A0K0K1A5 114 aa10.71□□□□□ -0.69
PDLIM7-215ENST00000506161 A0A1B0GUT8 65 aa10.71□□□□□ -0.69
PDLIM7-215ENST00000506161 GAGE12HA6NDE8 117 aa10.71□□□□□ -0.69
PDLIM7-215ENST00000506161 NCR2O95944 276 aa10.71□□□□□ -0.69
PDLIM7-215ENST00000506161 PLA2G1BP04054 148 aaKnown RBP10.71□□□□□ -0.69
PDLIM7-215ENST00000506161 HNRNPA3P51991 378 aaKnown RBP10.71□□□□□ -0.69
PDLIM7-215ENST00000506161 DGAT2L7PQ6IED9 249 aa10.71□□□□□ -0.69
PDLIM7-215ENST00000506161 NUP35Q8NFH5 326 aa10.71□□□□□ -0.69
PDLIM7-215ENST00000506161 TMEM242Q9NWH2 141 aa10.71□□□□□ -0.69
PDLIM7-215ENST00000506161 PLA2G2DQ9UNK4 145 aa10.71□□□□□ -0.69
PDLIM7-215ENST00000506161 hDV102S1A0JD36 115 aa10.7□□□□□ -0.7
PDLIM7-215ENST00000506161 FGF6P10767 208 aa10.7□□□□□ -0.7
PDLIM7-215ENST00000506161 ESDP10768 282 aa10.7□□□□□ -0.7
PDLIM7-215ENST00000506161 TMEM191AQ9H0A3 160 aa10.7□□□□□ -0.7
PDLIM7-215ENST00000506161 APCSP02743 223 aa10.69□□□□□ -0.7
PDLIM7-215ENST00000506161 CHTF8P0CG12 524 aa10.69□□□□□ -0.7
PDLIM7-215ENST00000506161 POLR2KP53803 58 aaKnown RBP10.69□□□□□ -0.7
PDLIM7-215ENST00000506161 SMIM15Q7Z3B0 74 aa10.69□□□□□ -0.7
PDLIM7-215ENST00000506161 I3L3M4 83 aa10.68□□□□□ -0.7
PDLIM7-215ENST00000506161 CNBPP62633 177 aaKnown RBP10.68□□□□□ -0.7
PDLIM7-215ENST00000506161 RNASEKQ6P5S7 137 aaKnown RBP10.68□□□□□ -0.7
PDLIM7-215ENST00000506161 NRACQ8N912 160 aa10.68□□□□□ -0.7
PDLIM7-215ENST00000506161 FAT3Q8TDW7 4589 aa10.68□□□□□ -0.7
PDLIM7-215ENST00000506161 PMCHP20382 165 aa10.67□□□□□ -0.7
PDLIM7-215ENST00000506161 TMEM241Q24JQ0 296 aa10.67□□□□□ -0.7
PDLIM7-215ENST00000506161 HIGD2BQ4VC39 106 aa10.67□□□□□ -0.7
PDLIM7-215ENST00000506161 TEX261Q6UWH6 196 aa10.67□□□□□ -0.7
PDLIM7-215ENST00000506161 CHCHD10Q8WYQ3 142 aaPredicted RBP10.67□□□□□ -0.7
PDLIM7-215ENST00000506161 FOXI1Q12951 378 aa10.66□□□□□ -0.7
PDLIM7-215ENST00000506161 CIRBPQ14011 172 aaKnown RBP10.66□□□□□ -0.7
PDLIM7-215ENST00000506161 ADIRFQ15847 76 aa10.66□□□□□ -0.7
PDLIM7-215ENST00000506161 AMMECR1LQ6DCA0 310 aa10.66□□□□□ -0.7
PDLIM7-215ENST00000506161 CLRN3Q8NCR9 226 aa10.66□□□□□ -0.7
PDLIM7-215ENST00000506161 ST20Q9HBF5 79 aa10.66□□□□□ -0.7
PDLIM7-215ENST00000506161 BORCS7Q96B45 105 aa10.65□□□□□ -0.7
PDLIM7-215ENST00000506161 TRBV27A0A0K0K1C4 114 aa10.64□□□□□ -0.71
PDLIM7-215ENST00000506161 SMIM27A0A1W2PRY6 76 aa10.64□□□□□ -0.71
PDLIM7-215ENST00000506161 H7C423 109 aa10.64□□□□□ -0.71
PDLIM7-215ENST00000506161 MRPL51Q4U2R6 128 aaKnown RBP10.64□□□□□ -0.71
PDLIM7-215ENST00000506161 NAT8Q9UHE5 227 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 203.8 ms