RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 TMEM262E9PQX1 116 aa6.71□□□□□ -1.34
NR1I3-220ENST00000505005 RTL8CO15255 209 aa6.71□□□□□ -1.34
NR1I3-220ENST00000505005 LINC00315P59091 139 aa6.71□□□□□ -1.34
NR1I3-220ENST00000505005 COTL1Q14019 142 aa6.71□□□□□ -1.34
NR1I3-220ENST00000505005 SUMO4Q6EEV6 95 aa6.71□□□□□ -1.34
NR1I3-220ENST00000505005 WFDC10BQ8IUB3 73 aa6.71□□□□□ -1.34
NR1I3-220ENST00000505005 MRPL18Q9H0U6 180 aaKnown RBP6.71□□□□□ -1.34
NR1I3-220ENST00000505005 RYR2Q92736 4967 aa6.7□□□□□ -1.34
NR1I3-220ENST00000505005 PHOX2AO14813 284 aa6.7□□□□□ -1.34
NR1I3-220ENST00000505005 UBE2L6O14933 153 aa6.7□□□□□ -1.34
NR1I3-220ENST00000505005 PPBPP02775 128 aa6.7□□□□□ -1.34
NR1I3-220ENST00000505005 IQCJQ1A5X6 159 aa6.7□□□□□ -1.34
NR1I3-220ENST00000505005 CDPF1Q6NVV7 123 aa6.7□□□□□ -1.34
NR1I3-220ENST00000505005 TMEM136Q6ZRR5 245 aa6.7□□□□□ -1.34
NR1I3-220ENST00000505005 NIT1Q86X76 327 aa6.7□□□□□ -1.34
NR1I3-220ENST00000505005 TRBV6-5A0A0K0K1A5 114 aa6.69□□□□□ -1.34
NR1I3-220ENST00000505005 A0A1B0GUV1 79 aa6.69□□□□□ -1.34
NR1I3-220ENST00000505005 CRPP02741 224 aa6.69□□□□□ -1.34
NR1I3-220ENST00000505005 TMEM18Q96B42 140 aa6.69□□□□□ -1.34
NR1I3-220ENST00000505005 CHCHD5Q9BSY4 110 aa6.69□□□□□ -1.34
NR1I3-220ENST00000505005 ST20Q9HBF5 79 aa6.69□□□□□ -1.34
NR1I3-220ENST00000505005 RYR3Q15413 4870 aa6.68□□□□□ -1.34
NR1I3-220ENST00000505005 DNAH6Q9C0G6 4158 aa6.68□□□□□ -1.34
NR1I3-220ENST00000505005 FAM229AH3BQW9 127 aa6.68□□□□□ -1.34
NR1I3-220ENST00000505005 I3L3M4 83 aa6.68□□□□□ -1.34
NR1I3-220ENST00000505005 TRGC2P03986 189 aa6.68□□□□□ -1.34
NR1I3-220ENST00000505005 MRPL54Q6P161 138 aaKnown RBP6.68□□□□□ -1.34
NR1I3-220ENST00000505005 KIR2DL4Q99706 377 aa6.68□□□□□ -1.34
NR1I3-220ENST00000505005 TMEM243Q9BU79 118 aa6.68□□□□□ -1.34
NR1I3-220ENST00000505005 TRAPPC1Q9Y5R8 145 aa6.68□□□□□ -1.34
NR1I3-220ENST00000505005 VPS13DQ5THJ4 4388 aa6.67□□□□□ -1.34
NR1I3-220ENST00000505005 TRAV8-4A0A0B4J246 113 aa6.67□□□□□ -1.34
NR1I3-220ENST00000505005 VCYO14598 125 aa6.67□□□□□ -1.34
NR1I3-220ENST00000505005 ZNF25P17030 456 aaPredicted RBP6.67□□□□□ -1.34
NR1I3-220ENST00000505005 PMCHP20382 165 aa6.67□□□□□ -1.34
NR1I3-220ENST00000505005 MIAQ16674 131 aa6.67□□□□□ -1.34
NR1I3-220ENST00000505005 C14orf177Q52M58 125 aa6.67□□□□□ -1.34
NR1I3-220ENST00000505005 COA6Q5JTJ3 125 aaKnown RBP6.67□□□□□ -1.34
NR1I3-220ENST00000505005 NTN5Q8WTR8 489 aaPredicted RBP6.67□□□□□ -1.34
NR1I3-220ENST00000505005 C20orf78Q9BR46 151 aa6.67□□□□□ -1.34
NR1I3-220ENST00000505005 LAMTOR2Q9Y2Q5 125 aa6.67□□□□□ -1.34
NR1I3-220ENST00000505005 HYDINQ4G0P3 5121 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 SDHAF1A6NFY7 115 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 HIST1H2BKO60814 126 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 IGHV3-30P01768 117 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 IGHV3-33P01772 117 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 APCSP02743 223 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 HIST1H2BJP06899 126 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 IGHV3-30-3P0DP02 117 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 IGHV3-30-5P0DP03 117 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 RAB4AP20338 218 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 HIST1H2BOP23527 126 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 G0S2P27469 103 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 HIST1H2BBP33778 126 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 AMTP48728 403 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 HIST1H2BDP58876 126 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 HIST1H2BCP62807 126 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 HIST2H2BEQ16778 126 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.66□□□□□ -1.34
NR1I3-220ENST00000505005 FAM104BQ5XKR9 115 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 HIST1H2BHQ93079 126 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 TMEM101Q96IK0 257 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 HIST1H2BNQ99877 126 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 HIST1H2BMQ99879 126 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 C1orf43Q9BWL3 253 aa6.66□□□□□ -1.34
NR1I3-220ENST00000505005 ANGP03950 147 aaKnown RBP6.65□□□□□ -1.34
NR1I3-220ENST00000505005 S100A6P06703 90 aa6.65□□□□□ -1.34
NR1I3-220ENST00000505005 CKS2P33552 79 aa6.65□□□□□ -1.34
NR1I3-220ENST00000505005 RPL32P62910 135 aaKnown RBP6.65□□□□□ -1.34
NR1I3-220ENST00000505005 FABP9Q0Z7S8 132 aa6.65□□□□□ -1.34
NR1I3-220ENST00000505005 AMMECR1LQ6DCA0 310 aa6.65□□□□□ -1.34
NR1I3-220ENST00000505005 Q8N976 141 aa6.65□□□□□ -1.34
NR1I3-220ENST00000505005 TMA7Q9Y2S6 64 aaKnown RBP6.65□□□□□ -1.34
NR1I3-220ENST00000505005 TRBV27A0A0K0K1C4 114 aa6.64□□□□□ -1.35
NR1I3-220ENST00000505005 CCL25O15444 150 aa6.64□□□□□ -1.35
NR1I3-220ENST00000505005 FCER1GP30273 86 aa6.64□□□□□ -1.35
NR1I3-220ENST00000505005 CAMPP49913 170 aa6.64□□□□□ -1.35
NR1I3-220ENST00000505005 KRTAP1-5Q9BYS1 174 aa6.64□□□□□ -1.35
NR1I3-220ENST00000505005 KLK12Q9UKR0 248 aa6.64□□□□□ -1.35
NR1I3-220ENST00000505005 A0A1B0GVY2 172 aa6.63□□□□□ -1.35
NR1I3-220ENST00000505005 C5orf52A6NGY3 159 aa6.63□□□□□ -1.35
NR1I3-220ENST00000505005 K7EMI3 77 aa6.63□□□□□ -1.35
NR1I3-220ENST00000505005 SUMO2P61956 95 aaKnown RBP6.63□□□□□ -1.35
NR1I3-220ENST00000505005 Q6ZRN7 208 aaPredicted RBP6.63□□□□□ -1.35
NR1I3-220ENST00000505005 AMN1Q8IY45 258 aa6.63□□□□□ -1.35
NR1I3-220ENST00000505005 ORMDL3Q8N138 153 aa6.63□□□□□ -1.35
NR1I3-220ENST00000505005 UBE2WQ96B02 151 aa6.63□□□□□ -1.35
NR1I3-220ENST00000505005 Q9HAA7 133 aa6.63□□□□□ -1.35
NR1I3-220ENST00000505005 Q9UF83 564 aa6.63□□□□□ -1.35
NR1I3-220ENST00000505005 IGKV2D-24A0A075B6R9 120 aa6.62□□□□□ -1.35
NR1I3-220ENST00000505005 A0A087WTM6 91 aa6.62□□□□□ -1.35
NR1I3-220ENST00000505005 LINC01549A6NIU2 74 aa6.62□□□□□ -1.35
NR1I3-220ENST00000505005 ESDP10768 282 aa6.62□□□□□ -1.35
NR1I3-220ENST00000505005 POLR2KP53803 58 aaKnown RBP6.62□□□□□ -1.35
NR1I3-220ENST00000505005 RBX1P62877 108 aa6.62□□□□□ -1.35
NR1I3-220ENST00000505005 DGAT2L7PQ6IED9 249 aa6.62□□□□□ -1.35
NR1I3-220ENST00000505005 PACRGQ96M98 296 aaPredicted RBP6.62□□□□□ -1.35
NR1I3-220ENST00000505005 ALKBH7Q9BT30 221 aaPredicted RBP6.62□□□□□ -1.35
NR1I3-220ENST00000505005 TMEM70Q9BUB7 260 aa6.62□□□□□ -1.35
NR1I3-220ENST00000505005 PRR34Q9NV39 138 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms