RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 SPINK6Q6UWN8 80 aa4.3□□□□□ -1.72
NPIPB3-203ENST00000504841 KCNRGQ8N5I3 272 aa4.3□□□□□ -1.72
NPIPB3-203ENST00000504841 C15orf56Q8N910 161 aa4.3□□□□□ -1.72
NPIPB3-203ENST00000504841 VAX2Q9UIW0 290 aa4.3□□□□□ -1.72
NPIPB3-203ENST00000504841 ZFP30Q9Y2G7 519 aa4.3□□□□□ -1.72
NPIPB3-203ENST00000504841 A0A096LNI7 61 aa4.29□□□□□ -1.72
NPIPB3-203ENST00000504841 GAGE12HA6NDE8 117 aa4.29□□□□□ -1.72
NPIPB3-203ENST00000504841 FAM74A7A6NL05 159 aa4.29□□□□□ -1.72
NPIPB3-203ENST00000504841 UMAD1C9J7I0 102 aa4.29□□□□□ -1.72
NPIPB3-203ENST00000504841 AKR1C3P42330 323 aa4.29□□□□□ -1.72
NPIPB3-203ENST00000504841 RPS10P46783 165 aaKnown RBP4.29□□□□□ -1.72
NPIPB3-203ENST00000504841 ZNF726P1Q15940 193 aa4.29□□□□□ -1.72
NPIPB3-203ENST00000504841 IQCJQ1A5X6 159 aa4.29□□□□□ -1.72
NPIPB3-203ENST00000504841 ZNF674Q2M3X9 581 aa4.29□□□□□ -1.72
NPIPB3-203ENST00000504841 Q6ZNX1 250 aa4.29□□□□□ -1.72
NPIPB3-203ENST00000504841 HIST1H2BAQ96A08 127 aa4.29□□□□□ -1.72
NPIPB3-203ENST00000504841 FMC1Q96HJ9 113 aa4.29□□□□□ -1.72
NPIPB3-203ENST00000504841 TMEM243Q9BU79 118 aa4.29□□□□□ -1.72
NPIPB3-203ENST00000504841 NKX6-2Q9C056 277 aaPredicted RBP4.29□□□□□ -1.72
NPIPB3-203ENST00000504841 H7C1H1 209 aa4.28□□□□□ -1.72
NPIPB3-203ENST00000504841 UBE2L6O14933 153 aa4.28□□□□□ -1.72
NPIPB3-203ENST00000504841 NKX2-5P52952 324 aaPredicted RBP4.28□□□□□ -1.72
NPIPB3-203ENST00000504841 AKR1C8PQ5T2L2 129 aa4.28□□□□□ -1.72
NPIPB3-203ENST00000504841 EIF5AL1Q6IS14 154 aaKnown RBP4.28□□□□□ -1.72
NPIPB3-203ENST00000504841 CFAP161Q6P656 301 aa4.28□□□□□ -1.72
NPIPB3-203ENST00000504841 COX8CQ7Z4L0 72 aa4.28□□□□□ -1.72
NPIPB3-203ENST00000504841 TCTE3Q8IZS6 198 aa4.28□□□□□ -1.72
NPIPB3-203ENST00000504841 STOML3Q8TAV4 291 aa4.28□□□□□ -1.72
NPIPB3-203ENST00000504841 AP1S3Q96PC3 154 aa4.28□□□□□ -1.72
NPIPB3-203ENST00000504841 CYTL1Q9NRR1 136 aa4.28□□□□□ -1.72
NPIPB3-203ENST00000504841 CTXND1A0A1B0GTU2 59 aa4.27□□□□□ -1.73
NPIPB3-203ENST00000504841 KANTRA0A1W2PQU2 76 aa4.27□□□□□ -1.73
NPIPB3-203ENST00000504841 LTAP01374 205 aa4.27□□□□□ -1.73
NPIPB3-203ENST00000504841 GZMBP10144 247 aa4.27□□□□□ -1.73
NPIPB3-203ENST00000504841 AMTP48728 403 aa4.27□□□□□ -1.73
NPIPB3-203ENST00000504841 CST9LP1Q5W188 147 aa4.27□□□□□ -1.73
NPIPB3-203ENST00000504841 TCEAL7Q9BRU2 100 aa4.27□□□□□ -1.73
NPIPB3-203ENST00000504841 TPPP3Q9BW30 176 aa4.27□□□□□ -1.73
NPIPB3-203ENST00000504841 A0A1B0GUV1 79 aa4.26□□□□□ -1.73
NPIPB3-203ENST00000504841 MAP1LC3B2A6NCE7 125 aa4.26□□□□□ -1.73
NPIPB3-203ENST00000504841 FAM231BA6NCW3 169 aa4.26□□□□□ -1.73
NPIPB3-203ENST00000504841 SMLR1H3BR10 107 aa4.26□□□□□ -1.73
NPIPB3-203ENST00000504841 M0QY20 66 aa4.26□□□□□ -1.73
NPIPB3-203ENST00000504841 BCL2L11O43521 198 aa4.26□□□□□ -1.73
NPIPB3-203ENST00000504841 SNAI2O43623 268 aa4.26□□□□□ -1.73
NPIPB3-203ENST00000504841 PFDN1O60925 122 aa4.26□□□□□ -1.73
NPIPB3-203ENST00000504841 OR5AL1P0C617 328 aa4.26□□□□□ -1.73
NPIPB3-203ENST00000504841 FHITP49789 147 aa4.26□□□□□ -1.73
NPIPB3-203ENST00000504841 SUMO4Q6EEV6 95 aa4.26□□□□□ -1.73
NPIPB3-203ENST00000504841 Q6ZRP5 223 aa4.26□□□□□ -1.73
NPIPB3-203ENST00000504841 TMUB2Q71RG4 321 aa4.26□□□□□ -1.73
NPIPB3-203ENST00000504841 MBD3L1Q8WWY6 194 aa4.26□□□□□ -1.73
NPIPB3-203ENST00000504841 MAP1LC3BQ9GZQ8 125 aa4.26□□□□□ -1.73
NPIPB3-203ENST00000504841 GVQW2A0A096LPI5 108 aaPredicted RBP4.25□□□□□ -1.73
NPIPB3-203ENST00000504841 TRAV1-1A0A0B4J248 108 aa4.25□□□□□ -1.73
NPIPB3-203ENST00000504841 CXCL1P09341 107 aa4.25□□□□□ -1.73
NPIPB3-203ENST00000504841 SRSF9Q13242 221 aaKnown RBP eCLIP4.25□□□□□ -1.73
NPIPB3-203ENST00000504841 COTL1Q14019 142 aa4.25□□□□□ -1.73
NPIPB3-203ENST00000504841 AKAP14Q86UN6 197 aa4.25□□□□□ -1.73
NPIPB3-203ENST00000504841 CHCHD10Q8WYQ3 142 aaPredicted RBP4.25□□□□□ -1.73
NPIPB3-203ENST00000504841 LINC00526Q96FQ7 95 aa4.25□□□□□ -1.73
NPIPB3-203ENST00000504841 CARD19Q96LW7 228 aa4.25□□□□□ -1.73
NPIPB3-203ENST00000504841 TRAV26-2A0A0B4J265 109 aa4.24□□□□□ -1.73
NPIPB3-203ENST00000504841 A0A1B0GV50 99 aa4.24□□□□□ -1.73
NPIPB3-203ENST00000504841 TEX46H3BTG2 121 aa4.24□□□□□ -1.73
NPIPB3-203ENST00000504841 PAGE4O60829 102 aa4.24□□□□□ -1.73
NPIPB3-203ENST00000504841 S100A9P06702 114 aaKnown RBP4.24□□□□□ -1.73
NPIPB3-203ENST00000504841 CACNG7P62955 275 aa4.24□□□□□ -1.73
NPIPB3-203ENST00000504841 AMMECR1LQ6DCA0 310 aa4.24□□□□□ -1.73
NPIPB3-203ENST00000504841 RNASEKQ6P5S7 137 aaKnown RBP4.24□□□□□ -1.73
NPIPB3-203ENST00000504841 RASL11AQ6T310 242 aa4.24□□□□□ -1.73
NPIPB3-203ENST00000504841 BAGE2Q86Y30 109 aa4.24□□□□□ -1.73
NPIPB3-203ENST00000504841 SFT2D1Q8WV19 159 aa4.24□□□□□ -1.73
NPIPB3-203ENST00000504841 LINC00474Q9P2X8 69 aa4.24□□□□□ -1.73
NPIPB3-203ENST00000504841 A0A0U1RQV1 116 aa4.23□□□□□ -1.73
NPIPB3-203ENST00000504841 MT-ND6P03923 174 aa4.23□□□□□ -1.73
NPIPB3-203ENST00000504841 XCL1P47992 114 aa4.23□□□□□ -1.73
NPIPB3-203ENST00000504841 FOXI1Q12951 378 aa4.23□□□□□ -1.73
NPIPB3-203ENST00000504841 GAGE2BQ13066 116 aa4.23□□□□□ -1.73
NPIPB3-203ENST00000504841 SLC51BQ86UW2 128 aa4.23□□□□□ -1.73
NPIPB3-203ENST00000504841 PRR26Q8N8Z3 221 aa4.23□□□□□ -1.73
NPIPB3-203ENST00000504841 FER1L6-AS1Q8NA97 138 aa4.23□□□□□ -1.73
NPIPB3-203ENST00000504841 FAM213BQ8TBF2 198 aa4.23□□□□□ -1.73
NPIPB3-203ENST00000504841 PKIGQ9Y2B9 76 aa4.23□□□□□ -1.73
NPIPB3-203ENST00000504841 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.22□□□□□ -1.73
NPIPB3-203ENST00000504841 IGKV2-29A2NJV5 120 aaPredicted RBP4.22□□□□□ -1.73
NPIPB3-203ENST00000504841 PRR4Q16378 134 aa4.22□□□□□ -1.73
NPIPB3-203ENST00000504841 ZNF664Q8N3J9 261 aa4.22□□□□□ -1.73
NPIPB3-203ENST00000504841 PGLYRP4Q96LB8 373 aa4.22□□□□□ -1.73
NPIPB3-203ENST00000504841 NIT2Q9NQR4 276 aa4.22□□□□□ -1.73
NPIPB3-203ENST00000504841 IGHV1-58A0A0C4DH39 117 aa4.21□□□□□ -1.74
NPIPB3-203ENST00000504841 CCL25O15444 150 aa4.21□□□□□ -1.74
NPIPB3-203ENST00000504841 BCL2P10415 239 aa4.21□□□□□ -1.74
NPIPB3-203ENST00000504841 TAGLN2P37802 199 aaKnown RBP4.21□□□□□ -1.74
NPIPB3-203ENST00000504841 PTTG1IPP53801 180 aa4.21□□□□□ -1.74
NPIPB3-203ENST00000504841 SYCNQ0VAF6 134 aa4.21□□□□□ -1.74
NPIPB3-203ENST00000504841 C1orf137Q5JT78 98 aa4.21□□□□□ -1.74
NPIPB3-203ENST00000504841 OR2D3Q8NGH3 330 aa4.21□□□□□ -1.74
NPIPB3-203ENST00000504841 MLST8Q9BVC4 326 aa4.21□□□□□ -1.74
NPIPB3-203ENST00000504841 MANBALQ9NQG1 85 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms