RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 SYCNQ0VAF6 134 aa9.56□□□□□ -0.88
PDLIM7-210ENST00000503827 RASL11AQ6T310 242 aa9.56□□□□□ -0.88
PDLIM7-210ENST00000503827 LOC107984640A0A0U1RRK4 108 aa9.55□□□□□ -0.88
PDLIM7-210ENST00000503827 AKR1C3P42330 323 aa9.55□□□□□ -0.88
PDLIM7-210ENST00000503827 ZNF726P1Q15940 193 aa9.55□□□□□ -0.88
PDLIM7-210ENST00000503827 AMMECR1LQ6DCA0 310 aa9.55□□□□□ -0.88
PDLIM7-210ENST00000503827 TCEAL7Q9BRU2 100 aa9.55□□□□□ -0.88
PDLIM7-210ENST00000503827 MED28Q9H204 178 aa9.55□□□□□ -0.88
PDLIM7-210ENST00000503827 TRAV1-1A0A0B4J248 108 aa9.54□□□□□ -0.88
PDLIM7-210ENST00000503827 H0Y9J4 135 aa9.54□□□□□ -0.88
PDLIM7-210ENST00000503827 ZNF561-AS1K7EIQ3 104 aa9.54□□□□□ -0.88
PDLIM7-210ENST00000503827 SSNA1O43805 119 aa9.54□□□□□ -0.88
PDLIM7-210ENST00000503827 IGLV7-43P04211 117 aa9.54□□□□□ -0.88
PDLIM7-210ENST00000503827 NIT2Q9NQR4 276 aa9.54□□□□□ -0.88
PDLIM7-210ENST00000503827 INMT-MINDY4F8WBC2 141 aa9.53□□□□□ -0.88
PDLIM7-210ENST00000503827 UBE2D1P51668 147 aa9.53□□□□□ -0.88
PDLIM7-210ENST00000503827 C9orf116Q5BN46 136 aaPredicted RBP9.53□□□□□ -0.88
PDLIM7-210ENST00000503827 STOML3Q8TAV4 291 aa9.53□□□□□ -0.88
PDLIM7-210ENST00000503827 XCL1P47992 114 aa9.52□□□□□ -0.89
PDLIM7-210ENST00000503827 RNASEKQ6P5S7 137 aaKnown RBP9.52□□□□□ -0.89
PDLIM7-210ENST00000503827 PHF5AQ7RTV0 110 aaKnown RBP9.52□□□□□ -0.89
PDLIM7-210ENST00000503827 ISOC2Q96AB3 205 aa9.52□□□□□ -0.89
PDLIM7-210ENST00000503827 FGF6P10767 208 aa9.51□□□□□ -0.89
PDLIM7-210ENST00000503827 RPL13AP40429 203 aaKnown RBP9.51□□□□□ -0.89
PDLIM7-210ENST00000503827 FHITP49789 147 aa9.51□□□□□ -0.89
PDLIM7-210ENST00000503827 EIF5AP63241 154 aaKnown RBP9.51□□□□□ -0.89
PDLIM7-210ENST00000503827 CST9LP1Q5W188 147 aa9.51□□□□□ -0.89
PDLIM7-210ENST00000503827 S100A9P06702 114 aaKnown RBP9.5□□□□□ -0.89
PDLIM7-210ENST00000503827 CAMPP49913 170 aa9.5□□□□□ -0.89
PDLIM7-210ENST00000503827 OR5A1Q8NGJ0 315 aa9.5□□□□□ -0.89
PDLIM7-210ENST00000503827 TPPP3Q9BW30 176 aa9.5□□□□□ -0.89
PDLIM7-210ENST00000503827 CCL25O15444 150 aa9.49□□□□□ -0.89
PDLIM7-210ENST00000503827 BCL2P10415 239 aa9.49□□□□□ -0.89
PDLIM7-210ENST00000503827 BAGE2Q86Y30 109 aa9.49□□□□□ -0.89
PDLIM7-210ENST00000503827 MLST8Q9BVC4 326 aa9.49□□□□□ -0.89
PDLIM7-210ENST00000503827 H7C423 109 aa9.48□□□□□ -0.89
PDLIM7-210ENST00000503827 KRTAP1-4P0C5Y4 121 aa9.48□□□□□ -0.89
PDLIM7-210ENST00000503827 IGLV4-69A0A075B6H9 119 aa9.47□□□□□ -0.89
PDLIM7-210ENST00000503827 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.47□□□□□ -0.89
PDLIM7-210ENST00000503827 A0A087WZ39 114 aa9.47□□□□□ -0.89
PDLIM7-210ENST00000503827 LINC00959A0A1B0GUT2 108 aa9.47□□□□□ -0.89
PDLIM7-210ENST00000503827 IGKV2-29A2NJV5 120 aaPredicted RBP9.47□□□□□ -0.89
PDLIM7-210ENST00000503827 MAP1LC3B2A6NCE7 125 aa9.46□□□□□ -0.9
PDLIM7-210ENST00000503827 APOMO95445 188 aa9.46□□□□□ -0.9
PDLIM7-210ENST00000503827 TRGC1P0CF51 173 aa9.46□□□□□ -0.9
PDLIM7-210ENST00000503827 NTF3P20783 257 aa9.46□□□□□ -0.9
PDLIM7-210ENST00000503827 AKR1C8PQ5T2L2 129 aa9.46□□□□□ -0.9
PDLIM7-210ENST00000503827 TSKUQ8WUA8 353 aa9.46□□□□□ -0.9
PDLIM7-210ENST00000503827 BTF3L4Q96K17 158 aa9.46□□□□□ -0.9
PDLIM7-210ENST00000503827 MAP1LC3BQ9GZQ8 125 aa9.46□□□□□ -0.9
PDLIM7-210ENST00000503827 CRCT1Q9UGL9 99 aa9.46□□□□□ -0.9
PDLIM7-210ENST00000503827 BORCS7-ASMTA0A0B4J1R7 106 aa9.45□□□□□ -0.9
PDLIM7-210ENST00000503827 TSPAN13O95857 204 aa9.45□□□□□ -0.9
PDLIM7-210ENST00000503827 NCR2O95944 276 aa9.45□□□□□ -0.9
PDLIM7-210ENST00000503827 ZNF25P17030 456 aaPredicted RBP9.45□□□□□ -0.9
PDLIM7-210ENST00000503827 RPL18AQ02543 176 aaKnown RBP9.45□□□□□ -0.9
PDLIM7-210ENST00000503827 SS18Q15532 418 aa9.45□□□□□ -0.9
PDLIM7-210ENST00000503827 NUP35Q8NFH5 326 aa9.45□□□□□ -0.9
PDLIM7-210ENST00000503827 TMEM101Q96IK0 257 aa9.45□□□□□ -0.9
PDLIM7-210ENST00000503827 MARVELD1Q9BSK0 173 aa9.45□□□□□ -0.9
PDLIM7-210ENST00000503827 APCSP02743 223 aa9.44□□□□□ -0.9
PDLIM7-210ENST00000503827 IGLC6P0CF74 106 aa9.44□□□□□ -0.9
PDLIM7-210ENST00000503827 LCE2DQ5TA82 110 aaPredicted RBP9.44□□□□□ -0.9
PDLIM7-210ENST00000503827 RPL7L1Q6DKI1 246 aaKnown RBP9.44□□□□□ -0.9
PDLIM7-210ENST00000503827 CD164L2Q6UWJ8 174 aa9.44□□□□□ -0.9
PDLIM7-210ENST00000503827 Q6ZNX1 250 aa9.44□□□□□ -0.9
PDLIM7-210ENST00000503827 CAMK2N2Q96S95 79 aa9.44□□□□□ -0.9
PDLIM7-210ENST00000503827 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.43□□□□□ -0.9
PDLIM7-210ENST00000503827 PAGE4O60829 102 aa9.43□□□□□ -0.9
PDLIM7-210ENST00000503827 RPS20P60866 119 aaKnown RBP9.43□□□□□ -0.9
PDLIM7-210ENST00000503827 MEF2BQ02080 365 aaPredicted RBP9.43□□□□□ -0.9
PDLIM7-210ENST00000503827 FSIP2Q5CZC0 6907 aa9.42□□□□□ -0.9
PDLIM7-210ENST00000503827 SCO2A0A1W2PP80 73 aa9.42□□□□□ -0.9
PDLIM7-210ENST00000503827 MALP21145 153 aa9.42□□□□□ -0.9
PDLIM7-210ENST00000503827 EIF5AL1Q6IS14 154 aaKnown RBP9.42□□□□□ -0.9
PDLIM7-210ENST00000503827 OR2D3Q8NGH3 330 aa9.42□□□□□ -0.9
PDLIM7-210ENST00000503827 CARHSP1Q9Y2V2 147 aaKnown RBP9.42□□□□□ -0.9
PDLIM7-210ENST00000503827 F2Z2F3 143 aa9.41□□□□□ -0.9
PDLIM7-210ENST00000503827 KRTAP11-1Q8IUC1 163 aa9.4□□□□□ -0.9
PDLIM7-210ENST00000503827 GATD1Q8NB37 220 aa9.4□□□□□ -0.9
PDLIM7-210ENST00000503827 PFDN1O60925 122 aa9.39□□□□□ -0.91
PDLIM7-210ENST00000503827 UPK1BO75841 260 aa9.39□□□□□ -0.91
PDLIM7-210ENST00000503827 TMUB2Q71RG4 321 aa9.39□□□□□ -0.91
PDLIM7-210ENST00000503827 S100ZQ8WXG8 99 aa9.39□□□□□ -0.91
PDLIM7-210ENST00000503827 C2orf48Q96LS8 159 aa9.39□□□□□ -0.91
PDLIM7-210ENST00000503827 XKRY2A2RUG3 117 aa9.38□□□□□ -0.91
PDLIM7-210ENST00000503827 BCL2L11O43521 198 aa9.38□□□□□ -0.91
PDLIM7-210ENST00000503827 LYZL1Q6UWQ5 148 aa9.38□□□□□ -0.91
PDLIM7-210ENST00000503827 OPRPNQ99935 248 aaPredicted RBP9.38□□□□□ -0.91
PDLIM7-210ENST00000503827 COX7A2LO14548 114 aa9.37□□□□□ -0.91
PDLIM7-210ENST00000503827 RNF151Q2KHN1 245 aa9.37□□□□□ -0.91
PDLIM7-210ENST00000503827 C19orf71A6NCJ1 209 aa9.36□□□□□ -0.91
PDLIM7-210ENST00000503827 ESDP10768 282 aa9.36□□□□□ -0.91
PDLIM7-210ENST00000503827 LINC00299Q6ZSB3 139 aa9.36□□□□□ -0.91
PDLIM7-210ENST00000503827 RPL39LQ96EH5 51 aaKnown RBP9.36□□□□□ -0.91
PDLIM7-210ENST00000503827 CDIP1Q9H305 208 aa9.36□□□□□ -0.91
PDLIM7-210ENST00000503827 CDC42SE2Q9NRR3 84 aa9.36□□□□□ -0.91
PDLIM7-210ENST00000503827 FAM168BA1KXE4 195 aa9.35□□□□□ -0.91
PDLIM7-210ENST00000503827 SDHAF1A6NFY7 115 aa9.35□□□□□ -0.91
PDLIM7-210ENST00000503827 PMCHP20382 165 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms