RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 TNFSF18Q9UNG2 199 aa5.61□□□□□ -1.51
CCDC171-209ENST00000498725 TRAV26-2A0A0B4J265 109 aa5.6□□□□□ -1.51
CCDC171-209ENST00000498725 A0A0U1RQV1 116 aa5.6□□□□□ -1.51
CCDC171-209ENST00000498725 CTXND1A0A1B0GTU2 59 aa5.6□□□□□ -1.51
CCDC171-209ENST00000498725 SNAI2O43623 268 aa5.6□□□□□ -1.51
CCDC171-209ENST00000498725 AMTP48728 403 aa5.6□□□□□ -1.51
CCDC171-209ENST00000498725 CACNG7P62955 275 aa5.6□□□□□ -1.51
CCDC171-209ENST00000498725 PRR4Q16378 134 aa5.6□□□□□ -1.51
CCDC171-209ENST00000498725 SUMO4Q6EEV6 95 aa5.6□□□□□ -1.51
CCDC171-209ENST00000498725 STOML3Q8TAV4 291 aa5.6□□□□□ -1.51
CCDC171-209ENST00000498725 CHCHD10Q8WYQ3 142 aaPredicted RBP5.6□□□□□ -1.51
CCDC171-209ENST00000498725 M0QY20 66 aa5.59□□□□□ -1.51
CCDC171-209ENST00000498725 MT-ND6P03923 174 aa5.59□□□□□ -1.51
CCDC171-209ENST00000498725 DEFA1P59665 94 aa5.59□□□□□ -1.51
CCDC171-209ENST00000498725 GAGE2BQ13066 116 aa5.59□□□□□ -1.51
CCDC171-209ENST00000498725 RPL7L1Q6DKI1 246 aaKnown RBP5.59□□□□□ -1.51
CCDC171-209ENST00000498725 NKX6-2Q9C056 277 aaPredicted RBP5.59□□□□□ -1.51
CCDC171-209ENST00000498725 LINC00474Q9P2X8 69 aa5.59□□□□□ -1.51
CCDC171-209ENST00000498725 GVQW2A0A096LPI5 108 aaPredicted RBP5.58□□□□□ -1.52
CCDC171-209ENST00000498725 OR5AL1P0C617 328 aa5.58□□□□□ -1.52
CCDC171-209ENST00000498725 LCE4AQ5TA78 99 aa5.58□□□□□ -1.52
CCDC171-209ENST00000498725 AMMECR1LQ6DCA0 310 aa5.58□□□□□ -1.52
CCDC171-209ENST00000498725 RNASEKQ6P5S7 137 aaKnown RBP5.58□□□□□ -1.52
CCDC171-209ENST00000498725 CARD19Q96LW7 228 aa5.58□□□□□ -1.52
CCDC171-209ENST00000498725 MAP1LC3B2A6NCE7 125 aa5.57□□□□□ -1.52
CCDC171-209ENST00000498725 UPK1BO75841 260 aa5.57□□□□□ -1.52
CCDC171-209ENST00000498725 CXCL1P09341 107 aa5.57□□□□□ -1.52
CCDC171-209ENST00000498725 XCL1P47992 114 aa5.57□□□□□ -1.52
CCDC171-209ENST00000498725 IFITM3Q01628 133 aa5.57□□□□□ -1.52
CCDC171-209ENST00000498725 COTL1Q14019 142 aa5.57□□□□□ -1.52
CCDC171-209ENST00000498725 C1orf137Q5JT78 98 aa5.57□□□□□ -1.52
CCDC171-209ENST00000498725 AKR1C8PQ5T2L2 129 aa5.57□□□□□ -1.52
CCDC171-209ENST00000498725 RASL11AQ6T310 242 aa5.57□□□□□ -1.52
CCDC171-209ENST00000498725 ZNF664Q8N3J9 261 aa5.57□□□□□ -1.52
CCDC171-209ENST00000498725 MARVELD1Q9BSK0 173 aa5.57□□□□□ -1.52
CCDC171-209ENST00000498725 MAP1LC3BQ9GZQ8 125 aa5.57□□□□□ -1.52
CCDC171-209ENST00000498725 PSORS1C2Q9UIG4 136 aa5.57□□□□□ -1.52
CCDC171-209ENST00000498725 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.56□□□□□ -1.52
CCDC171-209ENST00000498725 A0A1B0GV50 99 aa5.56□□□□□ -1.52
CCDC171-209ENST00000498725 A0A1W2PNN7 141 aa5.56□□□□□ -1.52
CCDC171-209ENST00000498725 IGKV2-29A2NJV5 120 aaPredicted RBP5.56□□□□□ -1.52
CCDC171-209ENST00000498725 PAGE4O60829 102 aa5.56□□□□□ -1.52
CCDC171-209ENST00000498725 FOXI1Q12951 378 aa5.56□□□□□ -1.52
CCDC171-209ENST00000498725 BAGE2Q86Y30 109 aa5.56□□□□□ -1.52
CCDC171-209ENST00000498725 NIT2Q9NQR4 276 aa5.56□□□□□ -1.52
CCDC171-209ENST00000498725 BORCS7-ASMTA0A0B4J1R7 106 aa5.55□□□□□ -1.52
CCDC171-209ENST00000498725 CCL25O15444 150 aa5.55□□□□□ -1.52
CCDC171-209ENST00000498725 PTTG1IPP53801 180 aa5.55□□□□□ -1.52
CCDC171-209ENST00000498725 SYCNQ0VAF6 134 aa5.55□□□□□ -1.52
CCDC171-209ENST00000498725 PHF5AQ7RTV0 110 aaKnown RBP5.55□□□□□ -1.52
CCDC171-209ENST00000498725 S100ZQ8WXG8 99 aa5.55□□□□□ -1.52
CCDC171-209ENST00000498725 PGLYRP4Q96LB8 373 aa5.55□□□□□ -1.52
CCDC171-209ENST00000498725 PKIGQ9Y2B9 76 aa5.55□□□□□ -1.52
CCDC171-209ENST00000498725 IGHV1-58A0A0C4DH39 117 aa5.54□□□□□ -1.52
CCDC171-209ENST00000498725 ZNF561-AS1K7EIQ3 104 aa5.54□□□□□ -1.52
CCDC171-209ENST00000498725 BCL2P10415 239 aa5.54□□□□□ -1.52
CCDC171-209ENST00000498725 Q5BKY6 102 aa5.54□□□□□ -1.52
CCDC171-209ENST00000498725 FER1L6-AS1Q8NA97 138 aa5.54□□□□□ -1.52
CCDC171-209ENST00000498725 FXYD6-FXYD2A0A087WZ82 144 aa5.53□□□□□ -1.52
CCDC171-209ENST00000498725 LOC107984640A0A0U1RRK4 108 aa5.53□□□□□ -1.52
CCDC171-209ENST00000498725 S100A9P06702 114 aaKnown RBP5.53□□□□□ -1.52
CCDC171-209ENST00000498725 FHITP49789 147 aa5.53□□□□□ -1.52
CCDC171-209ENST00000498725 RPL18AQ02543 176 aaKnown RBP5.53□□□□□ -1.52
CCDC171-209ENST00000498725 C9orf116Q5BN46 136 aaPredicted RBP5.53□□□□□ -1.52
CCDC171-209ENST00000498725 Q6ZNX1 250 aa5.53□□□□□ -1.52
CCDC171-209ENST00000498725 OR2D3Q8NGH3 330 aa5.53□□□□□ -1.52
CCDC171-209ENST00000498725 MLST8Q9BVC4 326 aa5.53□□□□□ -1.52
CCDC171-209ENST00000498725 ALG5Q9Y673 324 aa5.53□□□□□ -1.52
CCDC171-209ENST00000498725 MUC2Q02817 5179 aa5.52□□□□□ -1.53
CCDC171-209ENST00000498725 PFDN1O60925 122 aa5.52□□□□□ -1.53
CCDC171-209ENST00000498725 IGLC6P0CF74 106 aa5.52□□□□□ -1.53
CCDC171-209ENST00000498725 FGF6P10767 208 aa5.52□□□□□ -1.53
CCDC171-209ENST00000498725 NTF3P20783 257 aa5.52□□□□□ -1.53
CCDC171-209ENST00000498725 CAMPP49913 170 aa5.52□□□□□ -1.53
CCDC171-209ENST00000498725 DIRC1Q969H9 104 aa5.52□□□□□ -1.53
CCDC171-209ENST00000498725 TCEAL7Q9BRU2 100 aa5.52□□□□□ -1.53
CCDC171-209ENST00000498725 IGLV4-69A0A075B6H9 119 aa5.51□□□□□ -1.53
CCDC171-209ENST00000498725 LINC00959A0A1B0GUT2 108 aa5.51□□□□□ -1.53
CCDC171-209ENST00000498725 TSPAN13O95857 204 aa5.51□□□□□ -1.53
CCDC171-209ENST00000498725 APCSP02743 223 aa5.51□□□□□ -1.53
CCDC171-209ENST00000498725 IGLV7-43P04211 117 aa5.51□□□□□ -1.53
CCDC171-209ENST00000498725 TRGC1P0CF51 173 aa5.51□□□□□ -1.53
CCDC171-209ENST00000498725 EIF5AP63241 154 aaKnown RBP5.51□□□□□ -1.53
CCDC171-209ENST00000498725 LYZL1Q6UWQ5 148 aa5.51□□□□□ -1.53
CCDC171-209ENST00000498725 TMUB2Q71RG4 321 aa5.51□□□□□ -1.53
CCDC171-209ENST00000498725 OR5A1Q8NGJ0 315 aa5.51□□□□□ -1.53
CCDC171-209ENST00000498725 RPL39LQ96EH5 51 aaKnown RBP5.51□□□□□ -1.53
CCDC171-209ENST00000498725 A0A087WZ39 114 aa5.5□□□□□ -1.53
CCDC171-209ENST00000498725 H0Y9J4 135 aa5.5□□□□□ -1.53
CCDC171-209ENST00000498725 UBE2D1P51668 147 aa5.5□□□□□ -1.53
CCDC171-209ENST00000498725 SS18Q15532 418 aa5.5□□□□□ -1.53
CCDC171-209ENST00000498725 GATD1Q8NB37 220 aa5.5□□□□□ -1.53
CCDC171-209ENST00000498725 SFT2D1Q8WV19 159 aa5.5□□□□□ -1.53
CCDC171-209ENST00000498725 TMEM101Q96IK0 257 aa5.5□□□□□ -1.53
CCDC171-209ENST00000498725 BTF3L4Q96K17 158 aa5.5□□□□□ -1.53
CCDC171-209ENST00000498725 OPRPNQ99935 248 aaPredicted RBP5.5□□□□□ -1.53
CCDC171-209ENST00000498725 MED28Q9H204 178 aa5.5□□□□□ -1.53
CCDC171-209ENST00000498725 MALP21145 153 aa5.49□□□□□ -1.53
CCDC171-209ENST00000498725 RPL35P42766 123 aaKnown RBP5.49□□□□□ -1.53
CCDC171-209ENST00000498725 RPS20P60866 119 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms