RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 RASL11AQ6T310 242 aa7.16□□□□□ -1.26
CDK9-205ENST00000498339 PGLYRP4Q96LB8 373 aa7.16□□□□□ -1.26
CDK9-205ENST00000498339 SSBP4Q9BWG4 385 aaPredicted RBP7.16□□□□□ -1.26
CDK9-205ENST00000498339 MAP1LC3BQ9GZQ8 125 aa7.16□□□□□ -1.26
CDK9-205ENST00000498339 UPK1BO75841 260 aa7.15□□□□□ -1.26
CDK9-205ENST00000498339 GAGE2BQ13066 116 aa7.15□□□□□ -1.26
CDK9-205ENST00000498339 RPL7L1Q6DKI1 246 aaKnown RBP7.15□□□□□ -1.26
CDK9-205ENST00000498339 PRR26Q8N8Z3 221 aa7.15□□□□□ -1.26
CDK9-205ENST00000498339 S100ZQ8WXG8 99 aa7.15□□□□□ -1.26
CDK9-205ENST00000498339 MARVELD1Q9BSK0 173 aa7.15□□□□□ -1.26
CDK9-205ENST00000498339 XCL1P47992 114 aa7.14□□□□□ -1.27
CDK9-205ENST00000498339 C1orf137Q5JT78 98 aa7.14□□□□□ -1.27
CDK9-205ENST00000498339 BAGE2Q86Y30 109 aa7.14□□□□□ -1.27
CDK9-205ENST00000498339 IGHV1-58A0A0C4DH39 117 aa7.13□□□□□ -1.27
CDK9-205ENST00000498339 SCO2A0A1W2PP80 73 aa7.13□□□□□ -1.27
CDK9-205ENST00000498339 S100A9P06702 114 aaKnown RBP7.13□□□□□ -1.27
CDK9-205ENST00000498339 FHITP49789 147 aa7.13□□□□□ -1.27
CDK9-205ENST00000498339 PTTG1IPP53801 180 aa7.13□□□□□ -1.27
CDK9-205ENST00000498339 FOXI1Q12951 378 aa7.13□□□□□ -1.27
CDK9-205ENST00000498339 NIT2Q9NQR4 276 aa7.13□□□□□ -1.27
CDK9-205ENST00000498339 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.12□□□□□ -1.27
CDK9-205ENST00000498339 IGKV2-29A2NJV5 120 aaPredicted RBP7.12□□□□□ -1.27
CDK9-205ENST00000498339 ZNF561-AS1K7EIQ3 104 aa7.12□□□□□ -1.27
CDK9-205ENST00000498339 PAGE4O60829 102 aa7.12□□□□□ -1.27
CDK9-205ENST00000498339 PFDN1O60925 122 aa7.12□□□□□ -1.27
CDK9-205ENST00000498339 SYCNQ0VAF6 134 aa7.12□□□□□ -1.27
CDK9-205ENST00000498339 FER1L6-AS1Q8NA97 138 aa7.12□□□□□ -1.27
CDK9-205ENST00000498339 LOC107984640A0A0U1RRK4 108 aa7.11□□□□□ -1.27
CDK9-205ENST00000498339 A0A1B0GV50 99 aa7.11□□□□□ -1.27
CDK9-205ENST00000498339 TRGC1P0CF51 173 aa7.11□□□□□ -1.27
CDK9-205ENST00000498339 DIRC1Q969H9 104 aa7.11□□□□□ -1.27
CDK9-205ENST00000498339 FXYD6-FXYD2A0A087WZ82 144 aa7.1□□□□□ -1.27
CDK9-205ENST00000498339 CCL25O15444 150 aa7.1□□□□□ -1.27
CDK9-205ENST00000498339 APCSP02743 223 aa7.1□□□□□ -1.27
CDK9-205ENST00000498339 CAMPP49913 170 aa7.1□□□□□ -1.27
CDK9-205ENST00000498339 UBE2D1P51668 147 aa7.1□□□□□ -1.27
CDK9-205ENST00000498339 DEFA1P59665 94 aa7.1□□□□□ -1.27
CDK9-205ENST00000498339 IFITM3Q01628 133 aa7.1□□□□□ -1.27
CDK9-205ENST00000498339 RPL18AQ02543 176 aaKnown RBP7.1□□□□□ -1.27
CDK9-205ENST00000498339 ISOC2Q96AB3 205 aa7.1□□□□□ -1.27
CDK9-205ENST00000498339 BTF3L4Q96K17 158 aa7.1□□□□□ -1.27
CDK9-205ENST00000498339 MLST8Q9BVC4 326 aa7.1□□□□□ -1.27
CDK9-205ENST00000498339 A0A1W2PNN7 141 aa7.09□□□□□ -1.27
CDK9-205ENST00000498339 BCL2P10415 239 aa7.09□□□□□ -1.27
CDK9-205ENST00000498339 FGF6P10767 208 aa7.09□□□□□ -1.27
CDK9-205ENST00000498339 EIF5AP63241 154 aaKnown RBP7.09□□□□□ -1.27
CDK9-205ENST00000498339 C9orf116Q5BN46 136 aaPredicted RBP7.09□□□□□ -1.27
CDK9-205ENST00000498339 Q6ZNX1 250 aa7.09□□□□□ -1.27
CDK9-205ENST00000498339 PHF5AQ7RTV0 110 aaKnown RBP7.09□□□□□ -1.27
CDK9-205ENST00000498339 OR2D3Q8NGH3 330 aa7.09□□□□□ -1.27
CDK9-205ENST00000498339 OR5A1Q8NGJ0 315 aa7.09□□□□□ -1.27
CDK9-205ENST00000498339 TMEM101Q96IK0 257 aa7.09□□□□□ -1.27
CDK9-205ENST00000498339 IGLC6P0CF74 106 aa7.08□□□□□ -1.28
CDK9-205ENST00000498339 NTF3P20783 257 aa7.08□□□□□ -1.28
CDK9-205ENST00000498339 RPS20P60866 119 aaKnown RBP7.08□□□□□ -1.28
CDK9-205ENST00000498339 LINC00299Q6ZSB3 139 aa7.08□□□□□ -1.28
CDK9-205ENST00000498339 MED28Q9H204 178 aa7.08□□□□□ -1.28
CDK9-205ENST00000498339 NDUFA13Q9P0J0 144 aa7.08□□□□□ -1.28
CDK9-205ENST00000498339 ALG5Q9Y673 324 aa7.08□□□□□ -1.28
CDK9-205ENST00000498339 LINC00959A0A1B0GUT2 108 aa7.07□□□□□ -1.28
CDK9-205ENST00000498339 H0Y9J4 135 aa7.07□□□□□ -1.28
CDK9-205ENST00000498339 IGLV7-43P04211 117 aa7.07□□□□□ -1.28
CDK9-205ENST00000498339 MALP21145 153 aa7.07□□□□□ -1.28
CDK9-205ENST00000498339 IGLV4-69A0A075B6H9 119 aa7.06□□□□□ -1.28
CDK9-205ENST00000498339 IGLV1-50A0A075B6I6 118 aa7.06□□□□□ -1.28
CDK9-205ENST00000498339 TRAV1-1A0A0B4J248 108 aa7.06□□□□□ -1.28
CDK9-205ENST00000498339 XKRY2A2RUG3 117 aa7.06□□□□□ -1.28
CDK9-205ENST00000498339 H7C423 109 aa7.06□□□□□ -1.28
CDK9-205ENST00000498339 NCR2O95944 276 aa7.06□□□□□ -1.28
CDK9-205ENST00000498339 ZNF25P17030 456 aaPredicted RBP7.06□□□□□ -1.28
CDK9-205ENST00000498339 RPL35P42766 123 aaKnown RBP7.06□□□□□ -1.28
CDK9-205ENST00000498339 SS18Q15532 418 aa7.06□□□□□ -1.28
CDK9-205ENST00000498339 Q5BKY6 102 aa7.06□□□□□ -1.28
CDK9-205ENST00000498339 CAMK2N2Q96S95 79 aa7.06□□□□□ -1.28
CDK9-205ENST00000498339 A0A087WZ39 114 aa7.05□□□□□ -1.28
CDK9-205ENST00000498339 F2Z2F3 143 aa7.05□□□□□ -1.28
CDK9-205ENST00000498339 APOMO95445 188 aa7.05□□□□□ -1.28
CDK9-205ENST00000498339 LCE2AQ5TA79 106 aaPredicted RBP7.05□□□□□ -1.28
CDK9-205ENST00000498339 EIF5AL1Q6IS14 154 aaKnown RBP7.05□□□□□ -1.28
CDK9-205ENST00000498339 LYZL1Q6UWQ5 148 aa7.05□□□□□ -1.28
CDK9-205ENST00000498339 TMUB2Q71RG4 321 aa7.05□□□□□ -1.28
CDK9-205ENST00000498339 FAM213BQ8TBF2 198 aa7.05□□□□□ -1.28
CDK9-205ENST00000498339 SFT2D1Q8WV19 159 aa7.05□□□□□ -1.28
CDK9-205ENST00000498339 RPL39LQ96EH5 51 aaKnown RBP7.05□□□□□ -1.28
CDK9-205ENST00000498339 IFNA1P01562 189 aa7.04□□□□□ -1.28
CDK9-205ENST00000498339 TWIST1Q15672 202 aa7.04□□□□□ -1.28
CDK9-205ENST00000498339 CENPWQ5EE01 88 aa7.04□□□□□ -1.28
CDK9-205ENST00000498339 CD164L2Q6UWJ8 174 aa7.04□□□□□ -1.28
CDK9-205ENST00000498339 GATD1Q8NB37 220 aa7.04□□□□□ -1.28
CDK9-205ENST00000498339 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.03□□□□□ -1.28
CDK9-205ENST00000498339 RPL13AP40429 203 aaKnown RBP7.03□□□□□ -1.28
CDK9-205ENST00000498339 MEF2BQ02080 365 aaPredicted RBP7.03□□□□□ -1.28
CDK9-205ENST00000498339 KCNRGQ8N5I3 272 aa7.03□□□□□ -1.28
CDK9-205ENST00000498339 NUP35Q8NFH5 326 aa7.03□□□□□ -1.28
CDK9-205ENST00000498339 TSKUQ8WUA8 353 aa7.03□□□□□ -1.28
CDK9-205ENST00000498339 COX7A2LO14548 114 aa7.02□□□□□ -1.29
CDK9-205ENST00000498339 GIPP09681 153 aaPredicted RBP7.02□□□□□ -1.29
CDK9-205ENST00000498339 PMCHP20382 165 aa7.02□□□□□ -1.29
CDK9-205ENST00000498339 MRAP2Q96G30 205 aa7.02□□□□□ -1.29
CDK9-205ENST00000498339 C19orf71A6NCJ1 209 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms