RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 ZNF324O75467 553 aaPredicted RBP3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 PYYP10082 97 aa3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 ESDP10768 282 aa3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 SCGB1A1P11684 91 aa3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 TAS2R45P59539 299 aa3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 RHOBP62745 196 aa3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 EIF5AP63241 154 aaKnown RBP3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 DAZ2Q13117 558 aaKnown RBP3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 ZNF345Q14585 488 aa3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 JOSD1Q15040 202 aaPredicted RBP3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 IBA57Q5T440 356 aaKnown RBP3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 GFI1BQ5VTD9 330 aa3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 Q6AWC8 147 aa3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 MIR17HGQ75NE6 70 aa3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 SMIM20Q8N5G0 67 aa3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 RPP25LQ8N5L8 163 aaKnown RBP3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 C15orf53Q8NAA6 179 aa3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 PHYHIPLQ96FC7 376 aa3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 HYLS1Q96M11 299 aa3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 CHAC1Q9BUX1 264 aa3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 MED28Q9H204 178 aa3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 DNAH11Q96DT5 4516 aa3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 EPPK1P58107 5090 aaKnown RBP3.97□□□□□ -1.77
TMEM39A-212ENST00000497993 PKHD1P08F94 4074 aa3.96□□□□□ -1.77
TMEM39A-212ENST00000497993 C7orf71A4D174 169 aa3.96□□□□□ -1.78
TMEM39A-212ENST00000497993 IGKV3-20P01619 116 aa3.96□□□□□ -1.78
TMEM39A-212ENST00000497993 IGLV2-8P01709 118 aa3.96□□□□□ -1.78
TMEM39A-212ENST00000497993 P0DMU3 169 aa3.96□□□□□ -1.78
TMEM39A-212ENST00000497993 FAM231AP0DMU4 169 aa3.96□□□□□ -1.78
TMEM39A-212ENST00000497993 FAM231CP0DMU5 169 aa3.96□□□□□ -1.78
TMEM39A-212ENST00000497993 FXYD7P58549 80 aa3.96□□□□□ -1.78
TMEM39A-212ENST00000497993 TDRG1Q3Y452 100 aa3.96□□□□□ -1.78
TMEM39A-212ENST00000497993 RNF212Q495C1 297 aa3.96□□□□□ -1.78
TMEM39A-212ENST00000497993 FA2HQ7L5A8 372 aa3.96□□□□□ -1.78
TMEM39A-212ENST00000497993 ATP5L2Q7Z4Y8 100 aa3.96□□□□□ -1.78
TMEM39A-212ENST00000497993 AGPAT4-IT1Q9H0P7 198 aa3.96□□□□□ -1.78
TMEM39A-212ENST00000497993 CYTL1Q9NRR1 136 aa3.96□□□□□ -1.78
TMEM39A-212ENST00000497993 SPANXA1Q9NS26 97 aa3.96□□□□□ -1.78
TMEM39A-212ENST00000497993 ZNF492Q9P255 531 aa3.96□□□□□ -1.78
TMEM39A-212ENST00000497993 TIMM8BQ9Y5J9 83 aaPredicted RBP3.96□□□□□ -1.78
TMEM39A-212ENST00000497993 TRAV12-2A0A075B6T6 113 aa3.95□□□□□ -1.78
TMEM39A-212ENST00000497993 HMSDA8MTL9 139 aa3.95□□□□□ -1.78
TMEM39A-212ENST00000497993 SCO1O75880 301 aa3.95□□□□□ -1.78
TMEM39A-212ENST00000497993 AZU1P20160 251 aa3.95□□□□□ -1.78
TMEM39A-212ENST00000497993 ATP6V0CP27449 155 aa3.95□□□□□ -1.78
TMEM39A-212ENST00000497993 UBE2L3P68036 154 aaKnown RBP3.95□□□□□ -1.78
TMEM39A-212ENST00000497993 EIF5AL1Q6IS14 154 aaKnown RBP3.95□□□□□ -1.78
TMEM39A-212ENST00000497993 Q6ZR54 194 aa3.95□□□□□ -1.78
TMEM39A-212ENST00000497993 FAM19A3Q7Z5A8 133 aa3.95□□□□□ -1.78
TMEM39A-212ENST00000497993 EXOC3-AS1Q8N2X6 119 aa3.95□□□□□ -1.78
TMEM39A-212ENST00000497993 SLC25A29Q8N8R3 303 aa3.95□□□□□ -1.78
TMEM39A-212ENST00000497993 OR2T35Q8NGX2 323 aa3.95□□□□□ -1.78
TMEM39A-212ENST00000497993 GNPNAT1Q96EK6 184 aaPredicted RBP3.95□□□□□ -1.78
TMEM39A-212ENST00000497993 OTORQ9NRC9 128 aa3.95□□□□□ -1.78
TMEM39A-212ENST00000497993 PKIGQ9Y2B9 76 aa3.95□□□□□ -1.78
TMEM39A-212ENST00000497993 ARL2-SNX15V9GYD0 113 aa3.95□□□□□ -1.78
TMEM39A-212ENST00000497993 IGLL5B9A064 214 aa3.94□□□□□ -1.78
TMEM39A-212ENST00000497993 OR7C2O60412 319 aa3.94□□□□□ -1.78
TMEM39A-212ENST00000497993 LY6G6CO95867 125 aa3.94□□□□□ -1.78
TMEM39A-212ENST00000497993 OR10J4P0C629 311 aa3.94□□□□□ -1.78
TMEM39A-212ENST00000497993 ATP5G3P48201 142 aa3.94□□□□□ -1.78
TMEM39A-212ENST00000497993 LGALS9BQ3B8N2 356 aa3.94□□□□□ -1.78
TMEM39A-212ENST00000497993 PRR9Q5T870 116 aa3.94□□□□□ -1.78
TMEM39A-212ENST00000497993 ZC2HC1BQ5TFG8 222 aa3.94□□□□□ -1.78
TMEM39A-212ENST00000497993 RPL7L1Q6DKI1 246 aaKnown RBP3.94□□□□□ -1.78
TMEM39A-212ENST00000497993 TCTE3Q8IZS6 198 aa3.94□□□□□ -1.78
TMEM39A-212ENST00000497993 KCNRGQ8N5I3 272 aa3.94□□□□□ -1.78
TMEM39A-212ENST00000497993 EIF4E3Q8N5X7 224 aaKnown RBP3.94□□□□□ -1.78
TMEM39A-212ENST00000497993 C5orf17Q8NAS9 161 aa3.94□□□□□ -1.78
TMEM39A-212ENST00000497993 ZNRF2Q8NHG8 242 aa3.94□□□□□ -1.78
TMEM39A-212ENST00000497993 TCEAL7Q9BRU2 100 aa3.94□□□□□ -1.78
TMEM39A-212ENST00000497993 ZNF706Q9Y5V0 76 aaPredicted RBP3.94□□□□□ -1.78
TMEM39A-212ENST00000497993 DYNC1H1Q14204 4646 aaKnown RBP3.93□□□□□ -1.78
TMEM39A-212ENST00000497993 IGKV2-40A0A087WW87 121 aaPredicted RBP3.93□□□□□ -1.78
TMEM39A-212ENST00000497993 A0A1W2PRE2 83 aa3.93□□□□□ -1.78
TMEM39A-212ENST00000497993 IFITM10A6NMD0 228 aa3.93□□□□□ -1.78
TMEM39A-212ENST00000497993 KRTAP16-1A8MUX0 517 aa3.93□□□□□ -1.78
TMEM39A-212ENST00000497993 SPINK4O60575 86 aa3.93□□□□□ -1.78
TMEM39A-212ENST00000497993 IGKV2D-40P01614 121 aaPredicted RBP3.93□□□□□ -1.78
TMEM39A-212ENST00000497993 ARL14EPLP0DKL9 152 aa3.93□□□□□ -1.78
TMEM39A-212ENST00000497993 CSN1S1P47710 185 aa3.93□□□□□ -1.78
TMEM39A-212ENST00000497993 FLI1Q01543 452 aaPredicted RBP3.93□□□□□ -1.78
TMEM39A-212ENST00000497993 FAM74A1Q5RGS3 127 aa3.93□□□□□ -1.78
TMEM39A-212ENST00000497993 TMEM78Q5T7P6 136 aa3.93□□□□□ -1.78
TMEM39A-212ENST00000497993 TVP23CQ96ET8 276 aa3.93□□□□□ -1.78
TMEM39A-212ENST00000497993 VGLL1Q99990 258 aa3.93□□□□□ -1.78
TMEM39A-212ENST00000497993 UPK3BQ9BT76 320 aa3.93□□□□□ -1.78
TMEM39A-212ENST00000497993 SMIM3Q9BZL3 60 aa3.93□□□□□ -1.78
TMEM39A-212ENST00000497993 GTSF1LQ9H1H1 148 aa3.93□□□□□ -1.78
TMEM39A-212ENST00000497993 SH3BGRL3Q9H299 93 aa3.93□□□□□ -1.78
TMEM39A-212ENST00000497993 TMEM167BQ9NRX6 74 aa3.93□□□□□ -1.78
TMEM39A-212ENST00000497993 BORCS7-ASMTA0A0B4J1R7 106 aa3.92□□□□□ -1.78
TMEM39A-212ENST00000497993 A0A0D9SG52 128 aa3.92□□□□□ -1.78
TMEM39A-212ENST00000497993 TRBV6-1A0A0K0K1D8 114 aa3.92□□□□□ -1.78
TMEM39A-212ENST00000497993 CTXND1A0A1B0GTU2 59 aa3.92□□□□□ -1.78
TMEM39A-212ENST00000497993 B4DEV8 164 aa3.92□□□□□ -1.78
TMEM39A-212ENST00000497993 GGTLC3B5MD39 225 aa3.92□□□□□ -1.78
TMEM39A-212ENST00000497993 CXorf1O96002 111 aa3.92□□□□□ -1.78
TMEM39A-212ENST00000497993 PRM2P04554 102 aa3.92□□□□□ -1.78
TMEM39A-212ENST00000497993 PFN1P07737 140 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms