RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 TMEM170BQ5T4T1 132 aa1.34□□□□□ -2.19
CBX3-208ENST00000497498 FAM27D1Q5T7N8 215 aa1.34□□□□□ -2.19
CBX3-208ENST00000497498 LINC01545Q5VT33 79 aa1.34□□□□□ -2.19
CBX3-208ENST00000497498 SPATA31B1PQ5VZV4 182 aa1.34□□□□□ -2.19
CBX3-208ENST00000497498 SPINT4Q6UDR6 99 aa1.34□□□□□ -2.19
CBX3-208ENST00000497498 TCF23Q7RTU1 214 aa1.34□□□□□ -2.19
CBX3-208ENST00000497498 OR5AS1Q8N127 324 aa1.34□□□□□ -2.19
CBX3-208ENST00000497498 C1orf158Q8N1D5 194 aa1.34□□□□□ -2.19
CBX3-208ENST00000497498 TMEM86AQ8N2M4 240 aa1.34□□□□□ -2.19
CBX3-208ENST00000497498 ANKRD29Q8N6D5 301 aa1.34□□□□□ -2.19
CBX3-208ENST00000497498 SPANXA2-OT1Q8N9U9 137 aa1.34□□□□□ -2.19
CBX3-208ENST00000497498 OR5C1Q8NGR4 320 aa1.34□□□□□ -2.19
CBX3-208ENST00000497498 OTOSQ8NHW6 89 aa1.34□□□□□ -2.19
CBX3-208ENST00000497498 TSKUQ8WUA8 353 aa1.34□□□□□ -2.19
CBX3-208ENST00000497498 CT55Q8WUE5 264 aa1.34□□□□□ -2.19
CBX3-208ENST00000497498 PRELID3AQ96N28 172 aa1.34□□□□□ -2.19
CBX3-208ENST00000497498 GPX7Q96SL4 187 aaPredicted RBP1.34□□□□□ -2.19
CBX3-208ENST00000497498 FAM103A1Q9BTL3 118 aaKnown RBP1.34□□□□□ -2.19
CBX3-208ENST00000497498 DYNLRB1Q9NP97 96 aa1.34□□□□□ -2.19
CBX3-208ENST00000497498 KLF13Q9Y2Y9 288 aaPredicted RBP1.34□□□□□ -2.19
CBX3-208ENST00000497498 ZNF706Q9Y5V0 76 aaPredicted RBP1.34□□□□□ -2.19
CBX3-208ENST00000497498 CHCHD2Q9Y6H1 151 aaPredicted RBP1.34□□□□□ -2.19
CBX3-208ENST00000497498 UNC13CQ8NB66 2214 aa1.34□□□□□ -2.2
CBX3-208ENST00000497498 MYO18AQ92614 2054 aaKnown RBP1.33□□□□□ -2.2
CBX3-208ENST00000497498 MYCBP2O75592 4640 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 RP1P56715 2156 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 TRAV12-2A0A075B6T6 113 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 IGHV3OR16-8A0A075B7F1 116 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 TRAV2A0A0B4J234 112 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 TRAV13-1A0A0B4J241 112 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 CXorf51AA0A1B0GTR3 108 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 UBE2L5PA0A1B0GUS4 154 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 GRIFINA4D1Z8 144 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 C2orf70A6NJV1 201 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 A8MWL6 223 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 PIN1P1O15428 100 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 BCE1O60756 84 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 LHBP01229 141 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 PPYP01298 95 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 NPYP01303 97 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 IGHMP01871 453 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 MT-ATP8P03928 68 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 IGLC6P0CF74 106 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 P0DMU3 169 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 FAM231AP0DMU4 169 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 FAM231CP0DMU5 169 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 PYYP10082 97 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 CXCL8P10145 99 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 COX7CP15954 63 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 CTLA4P16410 223 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 RPL7P18124 248 aaKnown RBP1.33□□□□□ -2.2
CBX3-208ENST00000497498 CBLN1P23435 193 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 HLA-DMBP28068 263 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 DYNLT3P51808 116 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 HERVK_113P63121 156 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 GNG5P63218 68 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 SUPT4H1P63272 117 aaKnown RBP1.33□□□□□ -2.2
CBX3-208ENST00000497498 CCL20P78556 96 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 INSL4Q14641 139 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 ZNF141Q15928 474 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 SP6Q3SY56 376 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 VMA21Q3ZAQ7 101 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 SPRNQ5BIV9 151 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 NMSQ5H8A3 153 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 FAM201AQ5SY85 155 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 MRPL2Q5T653 305 aaKnown RBP1.33□□□□□ -2.2
CBX3-208ENST00000497498 FAM222AQ5U5X8 452 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 CFAP126Q5VTH2 177 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 CLEC19AQ6UXS0 136 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 DGAT2L6Q6ZPD8 337 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 Q6ZT83 130 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 C2orf91Q6ZV80 131 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 FAM231DQ6ZW35 169 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 AMN1Q8IY45 258 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 CLECL1Q8IZS7 167 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 DEFB106AQ8N104 65 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 GAPTQ8N292 157 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 C1orf64Q8NEQ6 169 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 WFDC11Q8NEX6 87 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 IFI27L1Q96BM0 104 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 SLC25A44Q96H78 314 aaPredicted RBP1.33□□□□□ -2.2
CBX3-208ENST00000497498 LINC01600Q96MT4 127 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 METTL26Q96S19 204 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 NMNAT3Q96T66 252 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 LINC01587Q99440 93 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 PDCD1LG2Q9BQ51 273 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 RTL8AQ9BWD3 113 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 VSIRQ9H7M9 311 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 TMEM167BQ9NRX6 74 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 INSIG2Q9Y5U4 225 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 FAT2Q9NYQ8 4349 aa1.33□□□□□ -2.2
CBX3-208ENST00000497498 NCKAP5O14513 1909 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 USF3Q68DE3 2245 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 ZNF407Q9C0G0 2248 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 CCDC88CQ9P219 2028 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 NINQ8N4C6 2090 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 TRAV27A0A087WT01 109 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 TRAV8-2A0A0B4J237 113 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 LOC107986453A0A1B0GWG9 222 aa1.32□□□□□ -2.2
CBX3-208ENST00000497498 SMIM27A0A1W2PRY6 76 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms