RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 HRNRQ86YZ3 2850 aaPredicted RBP0.06□□□□□ -2.4
PHC3-216ENST00000497171 CFTRP13569 1480 aa0.06□□□□□ -2.4
PHC3-216ENST00000497171 M0R135 149 aa0.06□□□□□ -2.4
PHC3-216ENST00000497171 NDUFA2O43678 99 aa0.06□□□□□ -2.4
PHC3-216ENST00000497171 HAMPP81172 84 aa0.06□□□□□ -2.4
PHC3-216ENST00000497171 SPAG11BQ08648 103 aa0.06□□□□□ -2.4
PHC3-216ENST00000497171 SPAG11AQ6PDA7 123 aa0.06□□□□□ -2.4
PHC3-216ENST00000497171 Q8N8P6 123 aa0.06□□□□□ -2.4
PHC3-216ENST00000497171 LSM10Q969L4 123 aaKnown RBP0.06□□□□□ -2.4
PHC3-216ENST00000497171 NAA60Q9H7X0 242 aa0.06□□□□□ -2.4
PHC3-216ENST00000497171 SERP1Q9Y6X1 66 aa0.06□□□□□ -2.4
PHC3-216ENST00000497171 ARAP2Q8WZ64 1704 aa0.06□□□□□ -2.4
PHC3-216ENST00000497171 TRAV22A0A0B4J277 110 aa0.05□□□□□ -2.4
PHC3-216ENST00000497171 SMIM4Q8WVI0 70 aa0.05□□□□□ -2.4
PHC3-216ENST00000497171 SNRNP25Q9BV90 132 aaKnown RBP0.05□□□□□ -2.4
PHC3-216ENST00000497171 CNFNQ9BYD5 112 aa0.05□□□□□ -2.4
PHC3-216ENST00000497171 CYP4F30PQ9H0H9 118 aa0.05□□□□□ -2.4
PHC3-216ENST00000497171 V9GYH0 126 aa0.05□□□□□ -2.4
PHC3-216ENST00000497171 F8P00451 2351 aa0.05□□□□□ -2.4
PHC3-216ENST00000497171 LRP1Q07954 4544 aaKnown RBP0.05□□□□□ -2.4
PHC3-216ENST00000497171 PRDM2Q13029 1718 aa0.04□□□□□ -2.4
PHC3-216ENST00000497171 MRC1P22897 1456 aa0.04□□□□□ -2.4
PHC3-216ENST00000497171 MIF4GDA9UHW6 222 aaKnown RBP0.04□□□□□ -2.4
PHC3-216ENST00000497171 M0R3E3 92 aa0.04□□□□□ -2.4
PHC3-216ENST00000497171 HMGN1P05114 100 aa0.04□□□□□ -2.4
PHC3-216ENST00000497171 Q6AWC8 147 aa0.04□□□□□ -2.4
PHC3-216ENST00000497171 AHCTF1Q8WYP5 2266 aa0.03□□□□□ -2.4
PHC3-216ENST00000497171 ANK2Q01484 3957 aa0.03□□□□□ -2.4
PHC3-216ENST00000497171 SPAARA0A1B0GVQ0 90 aa0.03□□□□□ -2.4
PHC3-216ENST00000497171 S100A3P33764 101 aa0.03□□□□□ -2.4
PHC3-216ENST00000497171 LENEPQ9Y5L5 61 aa0.03□□□□□ -2.4
PHC3-216ENST00000497171 SPCS1Q9Y6A9 102 aa0.03□□□□□ -2.4
PHC3-216ENST00000497171 ANKRD17O75179 2603 aaKnown RBP0.03□□□□□ -2.4
PHC3-216ENST00000497171 NAIPQ13075 1403 aa0.03□□□□□ -2.41
PHC3-216ENST00000497171 PPIP5K1Q6PFW1 1433 aa0.03□□□□□ -2.41
PHC3-216ENST00000497171 DMBT1Q9UGM3 2413 aaPredicted RBP0.03□□□□□ -2.41
PHC3-216ENST00000497171 DSTQ03001 7570 aaKnown RBP0.03□□□□□ -2.41
PHC3-216ENST00000497171 IGSF10Q6WRI0 2623 aa0.02□□□□□ -2.41
PHC3-216ENST00000497171 CACNA1CQ13936 2221 aa0.02□□□□□ -2.41
PHC3-216ENST00000497171 SSPOA2VEC9 5147 aa0.02□□□□□ -2.41
PHC3-216ENST00000497171 PHLPP1O60346 1717 aa0.02□□□□□ -2.41
PHC3-216ENST00000497171 Q56UQ5 140 aa0.02□□□□□ -2.41
PHC3-216ENST00000497171 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.02□□□□□ -2.41
PHC3-216ENST00000497171 UNC79Q9P2D8 2635 aa0.02□□□□□ -2.41
PHC3-216ENST00000497171 PXDNQ92626 1479 aa0.02□□□□□ -2.41
PHC3-216ENST00000497171 PATJQ8NI35 1801 aa0.01□□□□□ -2.41
PHC3-216ENST00000497171 DOCK1Q14185 1865 aa0.01□□□□□ -2.41
PHC3-216ENST00000497171 CATR1Q13166 79 aa0.01□□□□□ -2.41
PHC3-216ENST00000497171 TMEM170BQ5T4T1 132 aa0.01□□□□□ -2.41
PHC3-216ENST00000497171 COL7A1Q02388 2944 aa0.01□□□□□ -2.41
PHC3-216ENST00000497171 MYH7P12883 1935 aa0.01□□□□□ -2.41
PHC3-216ENST00000497171 C10orf142B7Z368 130 aa0□□□□□ -2.41
PHC3-216ENST00000497171 BCE1O60756 84 aa0□□□□□ -2.41
PHC3-216ENST00000497171 CHD9Q3L8U1 2897 aa0□□□□□ -2.41
PHC3-216ENST00000497171 PPP3R2Q96LZ3 170 aa0□□□□□ -2.41
PHC3-216ENST00000497171 WNK3Q9BYP7 1800 aa0□□□□□ -2.41
PHC3-216ENST00000497171 BIVM-ERCC5R4GMW8 1640 aa0□□□□□ -2.41
PHC3-216ENST00000497171 FOCADQ5VW36 1801 aa-0.01□□□□□ -2.41
PHC3-216ENST00000497171 DOCK2Q92608 1830 aa-0.01□□□□□ -2.41
PHC3-216ENST00000497171 NHSL1Q5SYE7 1610 aa-0.01□□□□□ -2.41
PHC3-216ENST00000497171 ERCC6L2Q5T890 1561 aa-0.01□□□□□ -2.41
PHC3-216ENST00000497171 IFNGP01579 166 aa-0.01□□□□□ -2.41
PHC3-216ENST00000497171 APOC2P02655 101 aa-0.01□□□□□ -2.41
PHC3-216ENST00000497171 WFDC2Q14508 124 aa-0.01□□□□□ -2.41
PHC3-216ENST00000497171 TSLPQ969D9 159 aa-0.01□□□□□ -2.41
PHC3-216ENST00000497171 ASXL3Q9C0F0 2248 aa-0.01□□□□□ -2.41
PHC3-216ENST00000497171 FXYD6-FXYD2A0A087WZ82 144 aa-0.02□□□□□ -2.41
PHC3-216ENST00000497171 LOC100130705A0A1B0GUX0 176 aa-0.02□□□□□ -2.41
PHC3-216ENST00000497171 K7EP13 123 aa-0.02□□□□□ -2.41
PHC3-216ENST00000497171 FGF7P21781 194 aa-0.02□□□□□ -2.41
PHC3-216ENST00000497171 COX17Q14061 63 aa-0.02□□□□□ -2.41
PHC3-216ENST00000497171 DEFB109BQ30KR1 87 aa-0.02□□□□□ -2.41
PHC3-216ENST00000497171 BAGE2Q86Y30 109 aa-0.02□□□□□ -2.41
PHC3-216ENST00000497171 Q8IZM0 81 aa-0.02□□□□□ -2.41
PHC3-216ENST00000497171 MGST2Q99735 147 aa-0.02□□□□□ -2.41
PHC3-216ENST00000497171 DYNLRB1Q9NP97 96 aa-0.02□□□□□ -2.41
PHC3-216ENST00000497171 ZNF236Q9UL36 1845 aa-0.02□□□□□ -2.41
PHC3-216ENST00000497171 LRP6O75581 1613 aa-0.02□□□□□ -2.41
PHC3-216ENST00000497171 SETXQ7Z333 2677 aaKnown RBP-0.02□□□□□ -2.41
PHC3-216ENST00000497171 CELSR1Q9NYQ6 3014 aa-0.03□□□□□ -2.41
PHC3-216ENST00000497171 MBD5Q9P267 1494 aa-0.03□□□□□ -2.41
PHC3-216ENST00000497171 KDM3BQ7LBC6 1761 aa-0.03□□□□□ -2.41
PHC3-216ENST00000497171 F8VRH5 84 aa-0.03□□□□□ -2.41
PHC3-216ENST00000497171 APOC3P02656 99 aa-0.03□□□□□ -2.41
PHC3-216ENST00000497171 AKAIN1P0CW23 69 aa-0.03□□□□□ -2.41
PHC3-216ENST00000497171 C8orf59Q8N0T1 100 aaPredicted RBP-0.03□□□□□ -2.41
PHC3-216ENST00000497171 NDUFA4L2Q9NRX3 87 aa-0.03□□□□□ -2.41
PHC3-216ENST00000497171 HIVEP3Q5T1R4 2406 aa-0.03□□□□□ -2.41
PHC3-216ENST00000497171 PLXNB2O15031 1838 aa-0.03□□□□□ -2.42
PHC3-216ENST00000497171 CPSF1Q10570 1443 aaKnown RBP-0.04□□□□□ -2.42
PHC3-216ENST00000497171 TRBV7-3A0A075B6L6 115 aa-0.04□□□□□ -2.42
PHC3-216ENST00000497171 UQCR11O14957 56 aa-0.04□□□□□ -2.42
PHC3-216ENST00000497171 BTG2P78543 158 aa-0.04□□□□□ -2.42
PHC3-216ENST00000497171 Q6JHZ5 121 aa-0.04□□□□□ -2.42
PHC3-216ENST00000497171 C1orf54Q8WWF1 131 aa-0.04□□□□□ -2.42
PHC3-216ENST00000497171 SPANXDQ9BXN6 97 aa-0.04□□□□□ -2.42
PHC3-216ENST00000497171 LRRC37A2A6NM11 1700 aa-0.04□□□□□ -2.42
PHC3-216ENST00000497171 UBR5O95071 2799 aaPredicted RBP-0.05□□□□□ -2.42
PHC3-216ENST00000497171 SNAPC5O75971 98 aa-0.05□□□□□ -2.42
PHC3-216ENST00000497171 TPPP2P59282 170 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms