RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 IGLV10-54A0A075B6I4 117 aa12.7□□□□□ -0.38
COL20A1-208ENST00000496810 GATCO43716 136 aaKnown RBP12.7□□□□□ -0.38
COL20A1-208ENST00000496810 FAM231DQ6ZW35 169 aa12.7□□□□□ -0.38
COL20A1-208ENST00000496810 SCXQ7RTU7 201 aa12.7□□□□□ -0.38
COL20A1-208ENST00000496810 PGLYRP4Q96LB8 373 aa12.7□□□□□ -0.38
COL20A1-208ENST00000496810 FAM210AQ96ND0 272 aa12.7□□□□□ -0.38
COL20A1-208ENST00000496810 SMIM7Q9BQ49 75 aa12.7□□□□□ -0.38
COL20A1-208ENST00000496810 LINC01551Q86U37 167 aa12.69□□□□□ -0.38
COL20A1-208ENST00000496810 EIF5A2Q9GZV4 153 aaKnown RBP12.69□□□□□ -0.38
COL20A1-208ENST00000496810 PRSS1P07477 247 aa12.68□□□□□ -0.38
COL20A1-208ENST00000496810 SRP19P09132 144 aaKnown RBP12.68□□□□□ -0.38
COL20A1-208ENST00000496810 REG3AQ06141 175 aa12.68□□□□□ -0.38
COL20A1-208ENST00000496810 FAM229AH3BQW9 127 aa12.67□□□□□ -0.38
COL20A1-208ENST00000496810 GAS8-AS1O95177 125 aa12.67□□□□□ -0.38
COL20A1-208ENST00000496810 LINC00528Q8N1L1 170 aa12.67□□□□□ -0.38
COL20A1-208ENST00000496810 LRP1Q07954 4544 aaKnown RBP12.67□□□□□ -0.38
COL20A1-208ENST00000496810 AMTP48728 403 aa12.66□□□□□ -0.38
COL20A1-208ENST00000496810 COTL1Q14019 142 aa12.66□□□□□ -0.38
COL20A1-208ENST00000496810 PKHD1L1Q86WI1 4243 aa12.65□□□□□ -0.38
COL20A1-208ENST00000496810 ZNF727A8MUV8 499 aa12.65□□□□□ -0.38
COL20A1-208ENST00000496810 A8MWL6 223 aa12.65□□□□□ -0.38
COL20A1-208ENST00000496810 CT83Q5H943 113 aa12.65□□□□□ -0.38
COL20A1-208ENST00000496810 C9JQL5 133 aa12.64□□□□□ -0.39
COL20A1-208ENST00000496810 C14orf177Q52M58 125 aa12.64□□□□□ -0.39
COL20A1-208ENST00000496810 FAT3Q8TDW7 4589 aa12.63□□□□□ -0.39
COL20A1-208ENST00000496810 A0A1B0GUV1 79 aa12.63□□□□□ -0.39
COL20A1-208ENST00000496810 HIGD1CA8MV81 97 aa12.63□□□□□ -0.39
COL20A1-208ENST00000496810 CIRBP-AS1Q8TBR5 109 aa12.63□□□□□ -0.39
COL20A1-208ENST00000496810 CHAC1Q9BUX1 264 aa12.63□□□□□ -0.39
COL20A1-208ENST00000496810 UBE2L6O14933 153 aa12.62□□□□□ -0.39
COL20A1-208ENST00000496810 TSKUQ8WUA8 353 aa12.62□□□□□ -0.39
COL20A1-208ENST00000496810 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.61□□□□□ -0.39
COL20A1-208ENST00000496810 IGKV2-29A2NJV5 120 aaPredicted RBP12.61□□□□□ -0.39
COL20A1-208ENST00000496810 SDHAF1A6NFY7 115 aa12.61□□□□□ -0.39
COL20A1-208ENST00000496810 NDUFS6O75380 124 aaKnown RBP12.61□□□□□ -0.39
COL20A1-208ENST00000496810 SRSF3P84103 164 aaKnown RBP12.61□□□□□ -0.39
COL20A1-208ENST00000496810 SMIM15Q7Z3B0 74 aa12.61□□□□□ -0.39
COL20A1-208ENST00000496810 V9GYV3 84 aa12.61□□□□□ -0.39
COL20A1-208ENST00000496810 RPS10P46783 165 aaKnown RBP12.6□□□□□ -0.39
COL20A1-208ENST00000496810 RNF185Q96GF1 192 aa12.6□□□□□ -0.39
COL20A1-208ENST00000496810 OSTCQ9NRP0 149 aa12.6□□□□□ -0.39
COL20A1-208ENST00000496810 IGKV3OR2-268A0A0C4DH90 116 aa12.59□□□□□ -0.39
COL20A1-208ENST00000496810 A0A1B0GUT8 65 aa12.59□□□□□ -0.39
COL20A1-208ENST00000496810 PANO1I0J062 215 aa12.59□□□□□ -0.39
COL20A1-208ENST00000496810 ISOC2Q96AB3 205 aa12.59□□□□□ -0.39
COL20A1-208ENST00000496810 APCSP02743 223 aa12.58□□□□□ -0.4
COL20A1-208ENST00000496810 KRTAP10-4P60372 401 aaPredicted RBP12.58□□□□□ -0.4
COL20A1-208ENST00000496810 TRAV8-4A0A0B4J246 113 aa12.57□□□□□ -0.4
COL20A1-208ENST00000496810 FAM231BA6NCW3 169 aa12.57□□□□□ -0.4
COL20A1-208ENST00000496810 RPL23P62829 140 aaKnown RBP12.57□□□□□ -0.4
COL20A1-208ENST00000496810 AMN1Q8IY45 258 aa12.57□□□□□ -0.4
COL20A1-208ENST00000496810 BORCS7Q96B45 105 aa12.57□□□□□ -0.4
COL20A1-208ENST00000496810 TMEM242Q9NWH2 141 aa12.57□□□□□ -0.4
COL20A1-208ENST00000496810 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.57□□□□□ -0.4
COL20A1-208ENST00000496810 TRBV6-5A0A0K0K1A5 114 aa12.56□□□□□ -0.4
COL20A1-208ENST00000496810 SMKR1H3BMG3 65 aa12.56□□□□□ -0.4
COL20A1-208ENST00000496810 NCR2O95944 276 aa12.56□□□□□ -0.4
COL20A1-208ENST00000496810 TSHBP01222 138 aa12.56□□□□□ -0.4
COL20A1-208ENST00000496810 SLPIP03973 132 aa12.56□□□□□ -0.4
COL20A1-208ENST00000496810 TEX261Q6UWH6 196 aa12.56□□□□□ -0.4
COL20A1-208ENST00000496810 C9orf163Q8N9P6 203 aa12.56□□□□□ -0.4
COL20A1-208ENST00000496810 NUP35Q8NFH5 326 aa12.56□□□□□ -0.4
COL20A1-208ENST00000496810 TMEM191AQ9H0A3 160 aa12.56□□□□□ -0.4
COL20A1-208ENST00000496810 hDV102S1A0JD36 115 aa12.55□□□□□ -0.4
COL20A1-208ENST00000496810 PLA2G1BP04054 148 aaKnown RBP12.55□□□□□ -0.4
COL20A1-208ENST00000496810 FGF6P10767 208 aa12.55□□□□□ -0.4
COL20A1-208ENST00000496810 RAB4AP20338 218 aa12.55□□□□□ -0.4
COL20A1-208ENST00000496810 ADIRFQ15847 76 aa12.55□□□□□ -0.4
COL20A1-208ENST00000496810 RNASEKQ6P5S7 137 aaKnown RBP12.55□□□□□ -0.4
COL20A1-208ENST00000496810 C15orf56Q8N910 161 aa12.55□□□□□ -0.4
COL20A1-208ENST00000496810 GAGE12HA6NDE8 117 aa12.54□□□□□ -0.4
COL20A1-208ENST00000496810 TMEM241Q24JQ0 296 aa12.54□□□□□ -0.4
COL20A1-208ENST00000496810 AMMECR1LQ6DCA0 310 aa12.54□□□□□ -0.4
COL20A1-208ENST00000496810 DGAT2L7PQ6IED9 249 aa12.54□□□□□ -0.4
COL20A1-208ENST00000496810 I3L3M4 83 aa12.53□□□□□ -0.4
COL20A1-208ENST00000496810 ST20Q9HBF5 79 aa12.53□□□□□ -0.4
COL20A1-208ENST00000496810 ESDP10768 282 aa12.52□□□□□ -0.41
COL20A1-208ENST00000496810 PMCHP20382 165 aa12.52□□□□□ -0.41
COL20A1-208ENST00000496810 CNBPP62633 177 aaKnown RBP12.52□□□□□ -0.41
COL20A1-208ENST00000496810 SDIM1Q6ZPB5 146 aa12.52□□□□□ -0.41
COL20A1-208ENST00000496810 POLR2KP53803 58 aaKnown RBP12.51□□□□□ -0.41
COL20A1-208ENST00000496810 FAM74A3Q4VXF1 159 aa12.51□□□□□ -0.41
COL20A1-208ENST00000496810 CLRN3Q8NCR9 226 aa12.51□□□□□ -0.41
COL20A1-208ENST00000496810 CHCHD10Q8WYQ3 142 aaPredicted RBP12.51□□□□□ -0.41
COL20A1-208ENST00000496810 NAT8Q9UHE5 227 aa12.51□□□□□ -0.41
COL20A1-208ENST00000496810 NRACQ8N912 160 aa12.5□□□□□ -0.41
COL20A1-208ENST00000496810 MRAP2Q96G30 205 aa12.5□□□□□ -0.41
COL20A1-208ENST00000496810 H7C423 109 aa12.49□□□□□ -0.41
COL20A1-208ENST00000496810 CHTF8P0CG12 524 aa12.49□□□□□ -0.41
COL20A1-208ENST00000496810 RIGQ13278 110 aa12.49□□□□□ -0.41
COL20A1-208ENST00000496810 HIGD2BQ4VC39 106 aa12.49□□□□□ -0.41
COL20A1-208ENST00000496810 NAT8BQ9UHF3 227 aa12.49□□□□□ -0.41
COL20A1-208ENST00000496810 TRBV27A0A0K0K1C4 114 aa12.48□□□□□ -0.41
COL20A1-208ENST00000496810 SMIM27A0A1W2PRY6 76 aa12.48□□□□□ -0.41
COL20A1-208ENST00000496810 ZNF25P17030 456 aaPredicted RBP12.47□□□□□ -0.41
COL20A1-208ENST00000496810 FOXI1Q12951 378 aa12.47□□□□□ -0.41
COL20A1-208ENST00000496810 PEA15Q15121 130 aa12.47□□□□□ -0.41
COL20A1-208ENST00000496810 XCL1P47992 114 aa12.46□□□□□ -0.41
COL20A1-208ENST00000496810 MRPL51Q4U2R6 128 aaKnown RBP12.46□□□□□ -0.41
COL20A1-208ENST00000496810 OR5A1Q8NGJ0 315 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms